RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 PTTG1O95997 202 aa16.55■□□□□ 0.24
LEMD3-203ENST00000541171 PFDN5Q99471 154 aa16.55■□□□□ 0.24
LEMD3-203ENST00000541171 C7orf71A4D174 169 aa16.54■□□□□ 0.24
LEMD3-203ENST00000541171 SLC25A5P05141 298 aaKnown RBP16.54■□□□□ 0.24
LEMD3-203ENST00000541171 PVALBP20472 110 aaPredicted RBP16.54■□□□□ 0.24
LEMD3-203ENST00000541171 BAXQ07812 192 aa16.54■□□□□ 0.24
LEMD3-203ENST00000541171 VSIG2Q96IQ7 327 aa16.54■□□□□ 0.24
LEMD3-203ENST00000541171 C11orf1Q9H5F2 150 aa16.54■□□□□ 0.24
LEMD3-203ENST00000541171 SLC39A9Q9NUM3 307 aa16.54■□□□□ 0.24
LEMD3-203ENST00000541171 A0A096LPF7 62 aa16.53■□□□□ 0.24
LEMD3-203ENST00000541171 TRGV1A0A0A0MS02 117 aa16.53■□□□□ 0.24
LEMD3-203ENST00000541171 UBE2L5PA0A1B0GUS4 154 aa16.53■□□□□ 0.24
LEMD3-203ENST00000541171 TRBV19A0A075B6N1 114 aa16.52■□□□□ 0.24
LEMD3-203ENST00000541171 ZNF253O75346 499 aa16.52■□□□□ 0.24
LEMD3-203ENST00000541171 BTF3P20290 206 aaKnown RBP16.52■□□□□ 0.24
LEMD3-203ENST00000541171 RNASE4P34096 147 aaKnown RBP16.52■□□□□ 0.24
LEMD3-203ENST00000541171 RPL29P47914 159 aaKnown RBP16.52■□□□□ 0.24
LEMD3-203ENST00000541171 CD300CQ08708 224 aa16.52■□□□□ 0.24
LEMD3-203ENST00000541171 BTN1A1Q13410 526 aa16.52■□□□□ 0.24
LEMD3-203ENST00000541171 ZNF680Q8NEM1 530 aa16.52■□□□□ 0.24
LEMD3-203ENST00000541171 FUT9Q9Y231 359 aa16.52■□□□□ 0.24
LEMD3-203ENST00000541171 TIMM9Q9Y5J7 89 aa16.52■□□□□ 0.24
LEMD3-203ENST00000541171 S100A10P60903 97 aa16.51■□□□□ 0.23
LEMD3-203ENST00000541171 RAB32Q13637 225 aa16.51■□□□□ 0.23
LEMD3-203ENST00000541171 C11orf72Q8NBR9 251 aa16.51■□□□□ 0.23
LEMD3-203ENST00000541171 MRPL53Q96EL3 112 aaKnown RBP16.51■□□□□ 0.23
LEMD3-203ENST00000541171 NMES1Q9C002 83 aa16.51■□□□□ 0.23
LEMD3-203ENST00000541171 KLF12Q9Y4X4 402 aa16.51■□□□□ 0.23
LEMD3-203ENST00000541171 PYYP10082 97 aa16.5■□□□□ 0.23
LEMD3-203ENST00000541171 LINC00315P59091 139 aa16.5■□□□□ 0.23
LEMD3-203ENST00000541171 VWC2Q2TAL6 325 aa16.5■□□□□ 0.23
LEMD3-203ENST00000541171 EIF4E3Q8N5X7 224 aaKnown RBP16.5■□□□□ 0.23
LEMD3-203ENST00000541171 BLNKQ8WV28 456 aa16.5■□□□□ 0.23
LEMD3-203ENST00000541171 LINC00477Q96M19 166 aa16.5■□□□□ 0.23
LEMD3-203ENST00000541171 AGPAT4-IT1Q9H0P7 198 aa16.5■□□□□ 0.23
LEMD3-203ENST00000541171 LYRM2Q9NU23 88 aaPredicted RBP16.5■□□□□ 0.23
LEMD3-203ENST00000541171 ZNF324O75467 553 aaPredicted RBP16.49■□□□□ 0.23
LEMD3-203ENST00000541171 NDUFB4O95168 129 aa16.49■□□□□ 0.23
LEMD3-203ENST00000541171 HIST1H1EP10412 219 aaKnown RBP16.49■□□□□ 0.23
LEMD3-203ENST00000541171 FGF7P21781 194 aa16.49■□□□□ 0.23
LEMD3-203ENST00000541171 S100A11P31949 105 aa16.49■□□□□ 0.23
LEMD3-203ENST00000541171 SULT1A1P50225 295 aa16.49■□□□□ 0.23
LEMD3-203ENST00000541171 CYCSP99999 105 aaKnown RBP16.49■□□□□ 0.23
LEMD3-203ENST00000541171 EXOC3-AS1Q8N2X6 119 aa16.49■□□□□ 0.23
LEMD3-203ENST00000541171 PRELID1Q9Y255 219 aa16.49■□□□□ 0.23
LEMD3-203ENST00000541171 IGSF23A1L1A6 192 aa16.48■□□□□ 0.23
LEMD3-203ENST00000541171 KLLNB2CW77 178 aa16.48■□□□□ 0.23
LEMD3-203ENST00000541171 SSNA1O43805 119 aa16.48■□□□□ 0.23
LEMD3-203ENST00000541171 IGHV3-53P01767 116 aa16.48■□□□□ 0.23
LEMD3-203ENST00000541171 GPX1P07203 203 aa16.48■□□□□ 0.23
LEMD3-203ENST00000541171 ANXA2RQ3ZCQ2 193 aa16.48■□□□□ 0.23
LEMD3-203ENST00000541171 TMEM14CQ9P0S9 112 aa16.48■□□□□ 0.23
LEMD3-203ENST00000541171 SIVA1O15304 175 aa16.47■□□□□ 0.23
LEMD3-203ENST00000541171 MPDU1O75352 247 aa16.47■□□□□ 0.23
LEMD3-203ENST00000541171 TMEM252Q8N6L7 170 aa16.47■□□□□ 0.23
LEMD3-203ENST00000541171 FAM19A4Q96LR4 140 aa16.47■□□□□ 0.23
LEMD3-203ENST00000541171 C18orf15Q96N68 181 aa16.47■□□□□ 0.23
LEMD3-203ENST00000541171 LINC00467Q9BRT7 94 aa16.47■□□□□ 0.23
LEMD3-203ENST00000541171 PAX4O43316 350 aa16.46■□□□□ 0.23
LEMD3-203ENST00000541171 SPINK4O60575 86 aa16.46■□□□□ 0.23
LEMD3-203ENST00000541171 SIX6O95475 246 aa16.46■□□□□ 0.23
LEMD3-203ENST00000541171 HBG1P69891 147 aa16.46■□□□□ 0.23
LEMD3-203ENST00000541171 HBG2P69892 147 aa16.46■□□□□ 0.23
LEMD3-203ENST00000541171 GCSAMLQ5JQS6 135 aa16.46■□□□□ 0.23
LEMD3-203ENST00000541171 STX12Q86Y82 276 aa16.46■□□□□ 0.23
LEMD3-203ENST00000541171 TP53TG3Q9ULZ0 132 aa16.46■□□□□ 0.23
LEMD3-203ENST00000541171 IGKV2-40A0A087WW87 121 aaPredicted RBP16.45■□□□□ 0.22
LEMD3-203ENST00000541171 RGS13O14921 159 aa16.45■□□□□ 0.22
LEMD3-203ENST00000541171 IGKV2D-40P01614 121 aaPredicted RBP16.45■□□□□ 0.22
LEMD3-203ENST00000541171 TCL1AP56279 114 aa16.45■□□□□ 0.22
LEMD3-203ENST00000541171 H2BFSP57053 126 aa16.45■□□□□ 0.22
LEMD3-203ENST00000541171 ICAM4Q14773 271 aa16.45■□□□□ 0.22
LEMD3-203ENST00000541171 FAM122CQ6P4D5 195 aa16.45■□□□□ 0.22
LEMD3-203ENST00000541171 AAMDCQ9H7C9 122 aa16.45■□□□□ 0.22
LEMD3-203ENST00000541171 MRPL16Q9NX20 251 aaKnown RBP16.45■□□□□ 0.22
LEMD3-203ENST00000541171 ICOSQ9Y6W8 199 aa16.45■□□□□ 0.22
LEMD3-203ENST00000541171 NXPH4O95158 308 aa16.44■□□□□ 0.22
LEMD3-203ENST00000541171 FUSP35637 526 aaKnown RBP eCLIP16.44■□□□□ 0.22
LEMD3-203ENST00000541171 PDE6HQ13956 83 aa16.44■□□□□ 0.22
LEMD3-203ENST00000541171 Q6ZQT7 251 aa16.44■□□□□ 0.22
LEMD3-203ENST00000541171 CHAC2Q8WUX2 184 aa16.44■□□□□ 0.22
LEMD3-203ENST00000541171 E5RGE8 158 aa16.43■□□□□ 0.22
LEMD3-203ENST00000541171 CRISP2P16562 243 aa16.43■□□□□ 0.22
LEMD3-203ENST00000541171 ATP6V1FQ16864 119 aa16.43■□□□□ 0.22
LEMD3-203ENST00000541171 TMEM78Q5T7P6 136 aa16.43■□□□□ 0.22
LEMD3-203ENST00000541171 PRR9Q5T870 116 aa16.43■□□□□ 0.22
LEMD3-203ENST00000541171 Q6ZRN7 208 aaPredicted RBP16.43■□□□□ 0.22
LEMD3-203ENST00000541171 C9orf47Q6ZRZ4 202 aa16.43■□□□□ 0.22
LEMD3-203ENST00000541171 ST6GAL2Q96JF0 529 aa16.43■□□□□ 0.22
LEMD3-203ENST00000541171 VGLL1Q99990 258 aa16.43■□□□□ 0.22
LEMD3-203ENST00000541171 PET100P0DJ07 73 aa16.42■□□□□ 0.22
LEMD3-203ENST00000541171 ARPC5LQ9BPX5 153 aa16.42■□□□□ 0.22
LEMD3-203ENST00000541171 SLC25A2Q9BXI2 301 aa16.42■□□□□ 0.22
LEMD3-203ENST00000541171 TNFRSF18Q9Y5U5 241 aa16.42■□□□□ 0.22
LEMD3-203ENST00000541171 ALG5Q9Y673 324 aa16.42■□□□□ 0.22
LEMD3-203ENST00000541171 IGHV1OR15-1A0A075B7D0 117 aa16.41■□□□□ 0.22
LEMD3-203ENST00000541171 IBA57Q5T440 356 aaKnown RBP16.41■□□□□ 0.22
LEMD3-203ENST00000541171 MIR17HGQ75NE6 70 aa16.41■□□□□ 0.22
LEMD3-203ENST00000541171 ZFAND2AQ8N6M9 145 aa16.41■□□□□ 0.22
LEMD3-203ENST00000541171 PPP1R1CQ8WVI7 109 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 284.4 ms