RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 DKK2Q9UBU2 259 aa11.97□□□□□ -0.49
SMARCA4-207ENST00000541122 WDR86Q86TI4 376 aa11.97□□□□□ -0.49
SMARCA4-207ENST00000541122 WFDC12Q8WWY7 111 aa11.97□□□□□ -0.49
SMARCA4-207ENST00000541122 RNF166Q96A37 237 aaPredicted RBP11.97□□□□□ -0.49
SMARCA4-207ENST00000541122 RLFQ13129 1914 aa11.97□□□□□ -0.49
SMARCA4-207ENST00000541122 KLRD1Q13241 179 aa11.97□□□□□ -0.49
SMARCA4-207ENST00000541122 C1orf159Q96HA4 380 aa11.97□□□□□ -0.49
SMARCA4-207ENST00000541122 ABCA7Q8IZY2 2146 aa11.97□□□□□ -0.49
SMARCA4-207ENST00000541122 PHF3Q92576 2039 aaKnown RBP11.97□□□□□ -0.49
SMARCA4-207ENST00000541122 SRSF2Q01130 221 aaKnown RBP11.97□□□□□ -0.49
SMARCA4-207ENST00000541122 WT1-ASQ06250 92 aa11.97□□□□□ -0.49
SMARCA4-207ENST00000541122 RHPN1-AS1Q9BWJ2 59 aa11.97□□□□□ -0.49
SMARCA4-207ENST00000541122 NUPR1O60356 82 aa11.96□□□□□ -0.49
SMARCA4-207ENST00000541122 Q6ZVH6 145 aa11.96□□□□□ -0.49
SMARCA4-207ENST00000541122 SSC4DQ8WTU2 575 aa11.96□□□□□ -0.49
SMARCA4-207ENST00000541122 C6orf226Q5I0X4 101 aa11.96□□□□□ -0.49
SMARCA4-207ENST00000541122 LYPD6Q86Y78 171 aa11.96□□□□□ -0.49
SMARCA4-207ENST00000541122 TEX48A0A1B0GUV7 120 aa11.96□□□□□ -0.5
SMARCA4-207ENST00000541122 AMTNQ6UX39 209 aa11.96□□□□□ -0.5
SMARCA4-207ENST00000541122 ZNF524Q96C55 264 aa11.96□□□□□ -0.5
SMARCA4-207ENST00000541122 DAZ1Q9NQZ3 744 aaKnown RBP11.96□□□□□ -0.5
SMARCA4-207ENST00000541122 KIAA2026Q5HYC2 2103 aa11.96□□□□□ -0.5
SMARCA4-207ENST00000541122 Q6ZSR3 168 aa11.96□□□□□ -0.5
SMARCA4-207ENST00000541122 IGHV3-73A0A0B4J1V6 119 aa11.95□□□□□ -0.5
SMARCA4-207ENST00000541122 J3QQQ9 107 aa11.95□□□□□ -0.5
SMARCA4-207ENST00000541122 INSP01308 110 aa11.95□□□□□ -0.5
SMARCA4-207ENST00000541122 CARD19Q96LW7 228 aa11.95□□□□□ -0.5
SMARCA4-207ENST00000541122 SDHAF1A6NFY7 115 aa11.95□□□□□ -0.5
SMARCA4-207ENST00000541122 IGLL5B9A064 214 aa11.95□□□□□ -0.5
SMARCA4-207ENST00000541122 ACYP1P07311 99 aa11.95□□□□□ -0.5
SMARCA4-207ENST00000541122 IGLC1P0CG04 106 aa11.95□□□□□ -0.5
SMARCA4-207ENST00000541122 ANKRD29Q8N6D5 301 aa11.95□□□□□ -0.5
SMARCA4-207ENST00000541122 C15orf53Q8NAA6 179 aa11.95□□□□□ -0.5
SMARCA4-207ENST00000541122 PLXNA2O75051 1894 aa11.95□□□□□ -0.5
SMARCA4-207ENST00000541122 LYPD2Q6UXB3 125 aa11.95□□□□□ -0.5
SMARCA4-207ENST00000541122 HIGD1BQ9P298 99 aa11.95□□□□□ -0.5
SMARCA4-207ENST00000541122 MED12Q93074 2177 aa11.94□□□□□ -0.5
SMARCA4-207ENST00000541122 NDUFA12Q9UI09 145 aa11.94□□□□□ -0.5
SMARCA4-207ENST00000541122 EFNA4P52798 201 aa11.94□□□□□ -0.5
SMARCA4-207ENST00000541122 LINC00527Q9UJ94 153 aa11.94□□□□□ -0.5
SMARCA4-207ENST00000541122 UBL5Q9BZL1 73 aa11.94□□□□□ -0.5
SMARCA4-207ENST00000541122 WISP1O95388 367 aa11.94□□□□□ -0.5
SMARCA4-207ENST00000541122 FOXI2Q6ZQN5 318 aa11.94□□□□□ -0.5
SMARCA4-207ENST00000541122 TRGV1A0A0A0MS02 117 aa11.93□□□□□ -0.5
SMARCA4-207ENST00000541122 TRAV13-1A0A0B4J241 112 aa11.93□□□□□ -0.5
SMARCA4-207ENST00000541122 TAX1BP3O14907 124 aa11.93□□□□□ -0.5
SMARCA4-207ENST00000541122 CFC1BP0CG36 223 aa11.93□□□□□ -0.5
SMARCA4-207ENST00000541122 CFC1P0CG37 223 aa11.93□□□□□ -0.5
SMARCA4-207ENST00000541122 TDRG1Q3Y452 100 aa11.93□□□□□ -0.5
SMARCA4-207ENST00000541122 NTN5Q8WTR8 489 aaPredicted RBP11.93□□□□□ -0.5
SMARCA4-207ENST00000541122 Q6ZR03 302 aa11.93□□□□□ -0.5
SMARCA4-207ENST00000541122 ZNF493Q6ZR52 646 aa11.93□□□□□ -0.5
SMARCA4-207ENST00000541122 MORN5Q5VZ52 161 aa11.93□□□□□ -0.5
SMARCA4-207ENST00000541122 PCP2Q8IVA1 136 aa11.93□□□□□ -0.5
SMARCA4-207ENST00000541122 APC2O95996 2303 aa11.92□□□□□ -0.5
SMARCA4-207ENST00000541122 WDR81Q562E7 1941 aa11.92□□□□□ -0.5
SMARCA4-207ENST00000541122 TRBV25-1A0A075B6N4 114 aa11.92□□□□□ -0.5
SMARCA4-207ENST00000541122 TEX36Q5VZQ5 186 aa11.92□□□□□ -0.5
SMARCA4-207ENST00000541122 DEFB104AQ8WTQ1 72 aa11.92□□□□□ -0.5
SMARCA4-207ENST00000541122 SCN5AQ14524 2016 aa11.92□□□□□ -0.5
SMARCA4-207ENST00000541122 ZNF625Q96I27 306 aaPredicted RBP11.92□□□□□ -0.5
SMARCA4-207ENST00000541122 COLQQ9Y215 455 aaPredicted RBP11.92□□□□□ -0.5
SMARCA4-207ENST00000541122 HEATR5AQ86XA9 2040 aa11.92□□□□□ -0.5
SMARCA4-207ENST00000541122 B5MCH6 92 aa11.91□□□□□ -0.5
SMARCA4-207ENST00000541122 FAM120AOSQ5T036 256 aa11.91□□□□□ -0.5
SMARCA4-207ENST00000541122 PROK2Q9HC23 129 aa11.91□□□□□ -0.5
SMARCA4-207ENST00000541122 TCF20Q9UGU0 1960 aaKnown RBP11.91□□□□□ -0.5
SMARCA4-207ENST00000541122 C8orf86Q6ZUL3 223 aa11.91□□□□□ -0.5
SMARCA4-207ENST00000541122 IGF2BP2-AS1Q96M15 143 aa11.91□□□□□ -0.5
SMARCA4-207ENST00000541122 TRAV26-2A0A0B4J265 109 aa11.91□□□□□ -0.5
SMARCA4-207ENST00000541122 SAP30O75446 220 aa11.91□□□□□ -0.5
SMARCA4-207ENST00000541122 TMEM219Q86XT9 240 aa11.91□□□□□ -0.5
SMARCA4-207ENST00000541122 C8orf31Q8N9H6 132 aa11.91□□□□□ -0.5
SMARCA4-207ENST00000541122 TRAV13-2A0A0B4J235 113 aa11.9□□□□□ -0.5
SMARCA4-207ENST00000541122 DSCR9P59020 149 aa11.9□□□□□ -0.5
SMARCA4-207ENST00000541122 SS18Q15532 418 aa11.9□□□□□ -0.5
SMARCA4-207ENST00000541122 NLRC5Q86WI3 1866 aa11.9□□□□□ -0.5
SMARCA4-207ENST00000541122 IGHV1-69DA0A0B4J2H0 117 aa11.9□□□□□ -0.5
SMARCA4-207ENST00000541122 ZNF134P52741 427 aa11.9□□□□□ -0.5
SMARCA4-207ENST00000541122 ZNRD1Q9P1U0 126 aa11.9□□□□□ -0.5
SMARCA4-207ENST00000541122 RBAKDNA6NC62 111 aa11.9□□□□□ -0.5
SMARCA4-207ENST00000541122 ZNF318Q5VUA4 2279 aa11.9□□□□□ -0.51
SMARCA4-207ENST00000541122 MRPL53Q96EL3 112 aaKnown RBP11.89□□□□□ -0.51
SMARCA4-207ENST00000541122 DPH3Q96FX2 82 aa11.89□□□□□ -0.51
SMARCA4-207ENST00000541122 CD59P13987 128 aa11.89□□□□□ -0.51
SMARCA4-207ENST00000541122 ANKRD39Q53RE8 183 aa11.89□□□□□ -0.51
SMARCA4-207ENST00000541122 RHOHQ15669 191 aa11.89□□□□□ -0.51
SMARCA4-207ENST00000541122 SS18L2Q9UHA2 77 aa11.89□□□□□ -0.51
SMARCA4-207ENST00000541122 TMEM105Q8N8V8 129 aa11.89□□□□□ -0.51
SMARCA4-207ENST00000541122 G3V4G9 280 aa11.88□□□□□ -0.51
SMARCA4-207ENST00000541122 ANXA2RQ3ZCQ2 193 aa11.88□□□□□ -0.51
SMARCA4-207ENST00000541122 TEN1Q86WV5 123 aa11.88□□□□□ -0.51
SMARCA4-207ENST00000541122 PRSS29PA6NIE9 313 aa11.88□□□□□ -0.51
SMARCA4-207ENST00000541122 HTN3P15516 51 aa11.88□□□□□ -0.51
SMARCA4-207ENST00000541122 LENEPQ9Y5L5 61 aa11.88□□□□□ -0.51
SMARCA4-207ENST00000541122 IGHV1OR15-1A0A075B7D0 117 aa11.88□□□□□ -0.51
SMARCA4-207ENST00000541122 DKK1O94907 266 aa11.87□□□□□ -0.51
SMARCA4-207ENST00000541122 TMEM126AQ9H061 195 aa11.87□□□□□ -0.51
SMARCA4-207ENST00000541122 H3BUX3 64 aa11.87□□□□□ -0.51
SMARCA4-207ENST00000541122 SH2D6Q7Z4S9 175 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms