RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 PGPA6NDG6 321 aa6.61□□□□□ -1.35
SNHG1-215ENST00000540904 C11orf94C9JXX5 98 aa6.61□□□□□ -1.35
SNHG1-215ENST00000540904 AZU1P20160 251 aa6.61□□□□□ -1.35
SNHG1-215ENST00000540904 C12orf74Q32Q52 190 aa6.61□□□□□ -1.35
SNHG1-215ENST00000540904 TMEM78Q5T7P6 136 aa6.61□□□□□ -1.35
SNHG1-215ENST00000540904 FAM222AQ5U5X8 452 aa6.61□□□□□ -1.35
SNHG1-215ENST00000540904 C9orf47Q6ZRZ4 202 aa6.61□□□□□ -1.35
SNHG1-215ENST00000540904 LINC00477Q96M19 166 aa6.61□□□□□ -1.35
SNHG1-215ENST00000540904 VGLL1Q99990 258 aa6.61□□□□□ -1.35
SNHG1-215ENST00000540904 ACTR3CQ9C0K3 210 aaPredicted RBP6.61□□□□□ -1.35
SNHG1-215ENST00000540904 CYTL1Q9NRR1 136 aa6.61□□□□□ -1.35
SNHG1-215ENST00000540904 DKK2Q9UBU2 259 aa6.61□□□□□ -1.35
SNHG1-215ENST00000540904 TRAV10A0A0B4J240 114 aa6.6□□□□□ -1.35
SNHG1-215ENST00000540904 TRAV12-3A0A0B4J271 114 aa6.6□□□□□ -1.35
SNHG1-215ENST00000540904 HMSDA8MTL9 139 aa6.6□□□□□ -1.35
SNHG1-215ENST00000540904 IGLL5B9A064 214 aa6.6□□□□□ -1.35
SNHG1-215ENST00000540904 H7BYZ3 331 aa6.6□□□□□ -1.35
SNHG1-215ENST00000540904 STAG3L2P0CL84 134 aa6.6□□□□□ -1.35
SNHG1-215ENST00000540904 STAG3L3P0CL85 134 aa6.6□□□□□ -1.35
SNHG1-215ENST00000540904 GCHFRP30047 84 aa6.6□□□□□ -1.35
SNHG1-215ENST00000540904 TAS2R60P59551 318 aa6.6□□□□□ -1.35
SNHG1-215ENST00000540904 ZNF345Q14585 488 aa6.6□□□□□ -1.35
SNHG1-215ENST00000540904 FAM74A1Q5RGS3 127 aa6.6□□□□□ -1.35
SNHG1-215ENST00000540904 AKR1C8PQ5T2L2 129 aa6.6□□□□□ -1.35
SNHG1-215ENST00000540904 KCNRGQ8N5I3 272 aa6.6□□□□□ -1.35
SNHG1-215ENST00000540904 Q8TAT8 98 aa6.6□□□□□ -1.35
SNHG1-215ENST00000540904 CMTM2Q8TAZ6 248 aa6.6□□□□□ -1.35
SNHG1-215ENST00000540904 RXFP4Q8TDU9 374 aa6.6□□□□□ -1.35
SNHG1-215ENST00000540904 C2CD4CQ8TF44 421 aa6.6□□□□□ -1.35
SNHG1-215ENST00000540904 ARPC5LQ9BPX5 153 aa6.6□□□□□ -1.35
SNHG1-215ENST00000540904 NIPSNAP3BQ9BS92 247 aa6.6□□□□□ -1.35
SNHG1-215ENST00000540904 OTORQ9NRC9 128 aa6.6□□□□□ -1.35
SNHG1-215ENST00000540904 RPH3ALQ9UNE2 315 aa6.6□□□□□ -1.35
SNHG1-215ENST00000540904 hCG_2014768A0A024R1R8 64 aa6.59□□□□□ -1.35
SNHG1-215ENST00000540904 DEFB131BA0A096LNP1 70 aa6.59□□□□□ -1.35
SNHG1-215ENST00000540904 A0A0D9SG52 128 aa6.59□□□□□ -1.35
SNHG1-215ENST00000540904 TEX48A0A1B0GUV7 120 aa6.59□□□□□ -1.35
SNHG1-215ENST00000540904 DIRC3C9JPN6 131 aa6.59□□□□□ -1.35
SNHG1-215ENST00000540904 CXorf1O96002 111 aa6.59□□□□□ -1.35
SNHG1-215ENST00000540904 SLC25A5P05141 298 aaKnown RBP6.59□□□□□ -1.35
SNHG1-215ENST00000540904 RNASE4P34096 147 aaKnown RBP6.59□□□□□ -1.35
SNHG1-215ENST00000540904 ZNF138P52744 262 aa6.59□□□□□ -1.35
SNHG1-215ENST00000540904 CD300CQ08708 224 aa6.59□□□□□ -1.35
SNHG1-215ENST00000540904 BTN1A1Q13410 526 aa6.59□□□□□ -1.35
SNHG1-215ENST00000540904 Q6ZNX1 250 aa6.59□□□□□ -1.35
SNHG1-215ENST00000540904 SSX7Q7RTT5 188 aa6.59□□□□□ -1.35
SNHG1-215ENST00000540904 IQCF2Q8IXL9 164 aa6.59□□□□□ -1.35
SNHG1-215ENST00000540904 FAM19A4Q96LR4 140 aa6.59□□□□□ -1.35
SNHG1-215ENST00000540904 C20orf144Q9BQM9 153 aa6.59□□□□□ -1.35
SNHG1-215ENST00000540904 PGPEP1Q9NXJ5 209 aa6.59□□□□□ -1.35
SNHG1-215ENST00000540904 ZNF492Q9P255 531 aa6.59□□□□□ -1.35
SNHG1-215ENST00000540904 TENM2Q9NT68 2774 aa6.58□□□□□ -1.36
SNHG1-215ENST00000540904 KANTRA0A1W2PQU2 76 aa6.58□□□□□ -1.36
SNHG1-215ENST00000540904 PLAC8L1A1L4L8 177 aa6.58□□□□□ -1.36
SNHG1-215ENST00000540904 C7orf71A4D174 169 aa6.58□□□□□ -1.36
SNHG1-215ENST00000540904 RBAKDNA6NC62 111 aa6.58□□□□□ -1.36
SNHG1-215ENST00000540904 KLLNB2CW77 178 aa6.58□□□□□ -1.36
SNHG1-215ENST00000540904 LY6G6CO95867 125 aa6.58□□□□□ -1.36
SNHG1-215ENST00000540904 GPX1P07203 203 aa6.58□□□□□ -1.36
SNHG1-215ENST00000540904 DEFB130BP0DP73 79 aa6.58□□□□□ -1.36
SNHG1-215ENST00000540904 DEFB130AP0DP74 79 aa6.58□□□□□ -1.36
SNHG1-215ENST00000540904 HTN3P15516 51 aa6.58□□□□□ -1.36
SNHG1-215ENST00000540904 DAD1P61803 113 aa6.58□□□□□ -1.36
SNHG1-215ENST00000540904 ZNF726P1Q15940 193 aa6.58□□□□□ -1.36
SNHG1-215ENST00000540904 GOLT1AQ6ZVE7 132 aa6.58□□□□□ -1.36
SNHG1-215ENST00000540904 CCDC28AQ8IWP9 274 aa6.58□□□□□ -1.36
SNHG1-215ENST00000540904 ZFAND2AQ8N6M9 145 aa6.58□□□□□ -1.36
SNHG1-215ENST00000540904 RNASE8Q8TDE3 154 aaKnown RBP6.58□□□□□ -1.36
SNHG1-215ENST00000540904 C16orf74Q96GX8 76 aa6.58□□□□□ -1.36
SNHG1-215ENST00000540904 ST6GAL2Q96JF0 529 aa6.58□□□□□ -1.36
SNHG1-215ENST00000540904 ZNF471Q9BX82 626 aaPredicted RBP6.58□□□□□ -1.36
SNHG1-215ENST00000540904 TMEM167BQ9NRX6 74 aa6.58□□□□□ -1.36
SNHG1-215ENST00000540904 CTXND1A0A1B0GTU2 59 aa6.57□□□□□ -1.36
SNHG1-215ENST00000540904 LYRM9A8MSI8 78 aa6.57□□□□□ -1.36
SNHG1-215ENST00000540904 BCL2L11O43521 198 aa6.57□□□□□ -1.36
SNHG1-215ENST00000540904 PFDN1O60925 122 aa6.57□□□□□ -1.36
SNHG1-215ENST00000540904 NMBP08949 121 aa6.57□□□□□ -1.36
SNHG1-215ENST00000540904 CRISP2P16562 243 aa6.57□□□□□ -1.36
SNHG1-215ENST00000540904 FGF8P55075 233 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-215ENST00000540904 GNG5P63218 68 aa6.57□□□□□ -1.36
SNHG1-215ENST00000540904 PRR9Q5T870 116 aa6.57□□□□□ -1.36
SNHG1-215ENST00000540904 ZNF493Q6ZR52 646 aa6.57□□□□□ -1.36
SNHG1-215ENST00000540904 SUN5Q8TC36 379 aa6.57□□□□□ -1.36
SNHG1-215ENST00000540904 TMEM263Q8WUH6 116 aaKnown RBP6.57□□□□□ -1.36
SNHG1-215ENST00000540904 LINC00476Q8WZB0 136 aa6.57□□□□□ -1.36
SNHG1-215ENST00000540904 PYGO2Q9BRQ0 406 aa6.57□□□□□ -1.36
SNHG1-215ENST00000540904 NOP10Q9NPE3 64 aaKnown RBP6.57□□□□□ -1.36
SNHG1-215ENST00000540904 TIMM8BQ9Y5J9 83 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-215ENST00000540904 CSMD3Q7Z407 3707 aa6.56□□□□□ -1.36
SNHG1-215ENST00000540904 DNAH7Q8WXX0 4024 aa6.56□□□□□ -1.36
SNHG1-215ENST00000540904 IGHV4-4A0A075B6R2 117 aa6.56□□□□□ -1.36
SNHG1-215ENST00000540904 TRAV8-1A0A0A6YYK1 113 aa6.56□□□□□ -1.36
SNHG1-215ENST00000540904 GGTLC3B5MD39 225 aa6.56□□□□□ -1.36
SNHG1-215ENST00000540904 RGS13O14921 159 aa6.56□□□□□ -1.36
SNHG1-215ENST00000540904 ZNF324O75467 553 aaPredicted RBP6.56□□□□□ -1.36
SNHG1-215ENST00000540904 FHITP49789 147 aa6.56□□□□□ -1.36
SNHG1-215ENST00000540904 SUMO1P63165 101 aaKnown RBP6.56□□□□□ -1.36
SNHG1-215ENST00000540904 Q6ZQT7 251 aa6.56□□□□□ -1.36
SNHG1-215ENST00000540904 TMUB2Q71RG4 321 aa6.56□□□□□ -1.36
SNHG1-215ENST00000540904 TCTE3Q8IZS6 198 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms