RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 SERF2P84101 59 aa12.03□□□□□ -0.48
CD9-209ENST00000540891 PQLC2Q6ZP29 291 aa12.03□□□□□ -0.48
CD9-209ENST00000540891 LINC00477Q96M19 166 aa12.03□□□□□ -0.48
CD9-209ENST00000540891 CYTL1Q9NRR1 136 aa12.03□□□□□ -0.48
CD9-209ENST00000540891 BORCS7-ASMTA0A0B4J1R7 106 aa12.02□□□□□ -0.49
CD9-209ENST00000540891 KLLNB2CW77 178 aa12.02□□□□□ -0.49
CD9-209ENST00000540891 H7BYZ3 331 aa12.02□□□□□ -0.49
CD9-209ENST00000540891 STAG3L2P0CL84 134 aa12.02□□□□□ -0.49
CD9-209ENST00000540891 STAG3L3P0CL85 134 aa12.02□□□□□ -0.49
CD9-209ENST00000540891 OR11H4Q8NGC9 324 aa12.02□□□□□ -0.49
CD9-209ENST00000540891 RAB24Q969Q5 203 aa12.02□□□□□ -0.49
CD9-209ENST00000540891 NIPSNAP3BQ9BS92 247 aa12.02□□□□□ -0.49
CD9-209ENST00000540891 APLNQ9ULZ1 77 aa12.02□□□□□ -0.49
CD9-209ENST00000540891 DEFB131BA0A096LNP1 70 aa12.01□□□□□ -0.49
CD9-209ENST00000540891 TRAV12-3A0A0B4J271 114 aa12.01□□□□□ -0.49
CD9-209ENST00000540891 TEX48A0A1B0GUV7 120 aa12.01□□□□□ -0.49
CD9-209ENST00000540891 IGLL5B9A064 214 aa12.01□□□□□ -0.49
CD9-209ENST00000540891 ARL14EPLP0DKL9 152 aa12.01□□□□□ -0.49
CD9-209ENST00000540891 HTN1P15515 57 aa12.01□□□□□ -0.49
CD9-209ENST00000540891 CRISP2P16562 243 aa12.01□□□□□ -0.49
CD9-209ENST00000540891 SSX7Q7RTT5 188 aa12.01□□□□□ -0.49
CD9-209ENST00000540891 ZFAND2AQ8N6M9 145 aa12.01□□□□□ -0.49
CD9-209ENST00000540891 RNASE8Q8TDE3 154 aaKnown RBP12.01□□□□□ -0.49
CD9-209ENST00000540891 GNPNAT1Q96EK6 184 aaPredicted RBP12.01□□□□□ -0.49
CD9-209ENST00000540891 ZNF492Q9P255 531 aa12.01□□□□□ -0.49
CD9-209ENST00000540891 LY6G6CO95867 125 aa12□□□□□ -0.49
CD9-209ENST00000540891 MBP02144 154 aa12□□□□□ -0.49
CD9-209ENST00000540891 SLC25A5P05141 298 aaKnown RBP12□□□□□ -0.49
CD9-209ENST00000540891 CD300CQ08708 224 aa12□□□□□ -0.49
CD9-209ENST00000540891 BTN1A1Q13410 526 aa12□□□□□ -0.49
CD9-209ENST00000540891 TMEM78Q5T7P6 136 aa12□□□□□ -0.49
CD9-209ENST00000540891 PRR9Q5T870 116 aa12□□□□□ -0.49
CD9-209ENST00000540891 SUN5Q8TC36 379 aa12□□□□□ -0.49
CD9-209ENST00000540891 OTORQ9NRC9 128 aa12□□□□□ -0.49
CD9-209ENST00000540891 IGHV4-4A0A075B6R2 117 aa11.99□□□□□ -0.49
CD9-209ENST00000540891 C7orf71A4D174 169 aa11.99□□□□□ -0.49
CD9-209ENST00000540891 RBAKDNA6NC62 111 aa11.99□□□□□ -0.49
CD9-209ENST00000540891 PGPA6NDG6 321 aa11.99□□□□□ -0.49
CD9-209ENST00000540891 DIRC3C9JPN6 131 aa11.99□□□□□ -0.49
CD9-209ENST00000540891 TAAR5O14804 337 aa11.99□□□□□ -0.49
CD9-209ENST00000540891 ZNF324O75467 553 aaPredicted RBP11.99□□□□□ -0.49
CD9-209ENST00000540891 CSN1S1P47710 185 aa11.99□□□□□ -0.49
CD9-209ENST00000540891 TCTAP57738 103 aa11.99□□□□□ -0.49
CD9-209ENST00000540891 ZNF726P1Q15940 193 aa11.99□□□□□ -0.49
CD9-209ENST00000540891 Q8TAT8 98 aa11.99□□□□□ -0.49
CD9-209ENST00000540891 TMEM263Q8WUH6 116 aaKnown RBP11.99□□□□□ -0.49
CD9-209ENST00000540891 C16orf74Q96GX8 76 aa11.99□□□□□ -0.49
CD9-209ENST00000540891 VPS13DQ5THJ4 4388 aa11.98□□□□□ -0.49
CD9-209ENST00000540891 LYRM9A8MSI8 78 aa11.98□□□□□ -0.49
CD9-209ENST00000540891 NMBP08949 121 aa11.98□□□□□ -0.49
CD9-209ENST00000540891 GCHFRP30047 84 aa11.98□□□□□ -0.49
CD9-209ENST00000540891 ZNF138P52744 262 aa11.98□□□□□ -0.49
CD9-209ENST00000540891 ZNF345Q14585 488 aa11.98□□□□□ -0.49
CD9-209ENST00000540891 KCNRGQ8N5I3 272 aa11.98□□□□□ -0.49
CD9-209ENST00000540891 RXFP4Q8TDU9 374 aa11.98□□□□□ -0.49
CD9-209ENST00000540891 HYLS1Q96M11 299 aa11.98□□□□□ -0.49
CD9-209ENST00000540891 ACTR3CQ9C0K3 210 aaPredicted RBP11.98□□□□□ -0.49
CD9-209ENST00000540891 HMSDA8MTL9 139 aa11.97□□□□□ -0.49
CD9-209ENST00000540891 RNASE4P34096 147 aaKnown RBP11.97□□□□□ -0.49
CD9-209ENST00000540891 DAD1P61803 113 aa11.97□□□□□ -0.49
CD9-209ENST00000540891 LGALS9CQ6DKI2 356 aa11.97□□□□□ -0.49
CD9-209ENST00000540891 Q6ZQT7 251 aa11.97□□□□□ -0.49
CD9-209ENST00000540891 ZNF493Q6ZR52 646 aa11.97□□□□□ -0.49
CD9-209ENST00000540891 PYGO2Q9BRQ0 406 aa11.97□□□□□ -0.49
CD9-209ENST00000540891 TRBV7-9A0A0J9YWB2 115 aa11.96□□□□□ -0.49
CD9-209ENST00000540891 ARPC5LQ9BPX5 153 aa11.96□□□□□ -0.49
CD9-209ENST00000540891 CXorf1O96002 111 aa11.95□□□□□ -0.5
CD9-209ENST00000540891 GPX1P07203 203 aa11.95□□□□□ -0.5
CD9-209ENST00000540891 DEFB130BP0DP73 79 aa11.95□□□□□ -0.5
CD9-209ENST00000540891 DEFB130AP0DP74 79 aa11.95□□□□□ -0.5
CD9-209ENST00000540891 GNG5P63218 68 aa11.95□□□□□ -0.5
CD9-209ENST00000540891 FAM74A1Q5RGS3 127 aa11.95□□□□□ -0.5
CD9-209ENST00000540891 Q6ZNX1 250 aa11.95□□□□□ -0.5
CD9-209ENST00000540891 ARL6IP6Q8N6S5 226 aa11.95□□□□□ -0.5
CD9-209ENST00000540891 CMTM2Q8TAZ6 248 aa11.95□□□□□ -0.5
CD9-209ENST00000540891 ST6GAL2Q96JF0 529 aa11.95□□□□□ -0.5
CD9-209ENST00000540891 LINC00467Q9BRT7 94 aa11.95□□□□□ -0.5
CD9-209ENST00000540891 NOP10Q9NPE3 64 aaKnown RBP11.95□□□□□ -0.5
CD9-209ENST00000540891 RPH3ALQ9UNE2 315 aa11.95□□□□□ -0.5
CD9-209ENST00000540891 TIMM8BQ9Y5J9 83 aaPredicted RBP11.95□□□□□ -0.5
CD9-209ENST00000540891 CTXND1A0A1B0GTU2 59 aa11.94□□□□□ -0.5
CD9-209ENST00000540891 GOLT1AQ6ZVE7 132 aa11.94□□□□□ -0.5
CD9-209ENST00000540891 CCDC28AQ8IWP9 274 aa11.94□□□□□ -0.5
CD9-209ENST00000540891 TMED6Q8WW62 240 aa11.94□□□□□ -0.5
CD9-209ENST00000540891 KMT2AQ03164 3969 aa11.93□□□□□ -0.5
CD9-209ENST00000540891 GGTLC3B5MD39 225 aa11.93□□□□□ -0.5
CD9-209ENST00000540891 HTN3P15516 51 aa11.93□□□□□ -0.5
CD9-209ENST00000540891 AKR1C8PQ5T2L2 129 aa11.93□□□□□ -0.5
CD9-209ENST00000540891 LINC00612Q8N6U2 182 aa11.93□□□□□ -0.5
CD9-209ENST00000540891 C11orf72Q8NBR9 251 aa11.93□□□□□ -0.5
CD9-209ENST00000540891 TMEM167BQ9NRX6 74 aa11.93□□□□□ -0.5
CD9-209ENST00000540891 LENEPQ9Y5L5 61 aa11.93□□□□□ -0.5
CD9-209ENST00000540891 TRAV8-1A0A0A6YYK1 113 aa11.92□□□□□ -0.5
CD9-209ENST00000540891 A0A0D9SG52 128 aa11.92□□□□□ -0.5
CD9-209ENST00000540891 BCL2L11O43521 198 aa11.92□□□□□ -0.5
CD9-209ENST00000540891 ANXA2RQ3ZCQ2 193 aa11.92□□□□□ -0.5
CD9-209ENST00000540891 EIF4E3Q8N5X7 224 aaKnown RBP11.92□□□□□ -0.5
CD9-209ENST00000540891 TVP23CQ96ET8 276 aa11.92□□□□□ -0.5
CD9-209ENST00000540891 NDUFAF3Q9BU61 184 aa11.92□□□□□ -0.5
CD9-209ENST00000540891 TMPRSS5Q9H3S3 457 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms