RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 MAPKAPK5-AS1Q8N8E1 139 aa9.76□□□□□ -0.85
SNHG1-213ENST00000540725 ZNF680Q8NEM1 530 aa9.76□□□□□ -0.85
SNHG1-213ENST00000540725 CCDC32Q9BV29 185 aa9.76□□□□□ -0.85
SNHG1-213ENST00000540725 GSN-AS1Q9NRJ2 163 aa9.76□□□□□ -0.85
SNHG1-213ENST00000540725 TMEM14CQ9P0S9 112 aa9.76□□□□□ -0.85
SNHG1-213ENST00000540725 TRGV2A0A075B6R0 118 aa9.75□□□□□ -0.85
SNHG1-213ENST00000540725 A0A1W2PPQ1 181 aa9.75□□□□□ -0.85
SNHG1-213ENST00000540725 NDUFB4O95168 129 aa9.75□□□□□ -0.85
SNHG1-213ENST00000540725 HIST1H1EP10412 219 aaKnown RBP9.75□□□□□ -0.85
SNHG1-213ENST00000540725 FGF7P21781 194 aa9.75□□□□□ -0.85
SNHG1-213ENST00000540725 HBG1P69891 147 aa9.75□□□□□ -0.85
SNHG1-213ENST00000540725 HBG2P69892 147 aa9.75□□□□□ -0.85
SNHG1-213ENST00000540725 IFITM3Q01628 133 aa9.75□□□□□ -0.85
SNHG1-213ENST00000540725 RAB32Q13637 225 aa9.75□□□□□ -0.85
SNHG1-213ENST00000540725 STX12Q86Y82 276 aa9.75□□□□□ -0.85
SNHG1-213ENST00000540725 TMEM252Q8N6L7 170 aa9.75□□□□□ -0.85
SNHG1-213ENST00000540725 C11orf72Q8NBR9 251 aa9.75□□□□□ -0.85
SNHG1-213ENST00000540725 CHAC2Q8WUX2 184 aa9.75□□□□□ -0.85
SNHG1-213ENST00000540725 VSIG2Q96IQ7 327 aa9.75□□□□□ -0.85
SNHG1-213ENST00000540725 PRELID1Q9Y255 219 aa9.75□□□□□ -0.85
SNHG1-213ENST00000540725 A0A096LPF7 62 aa9.75□□□□□ -0.85
SNHG1-213ENST00000540725 KLLNB2CW77 178 aa9.75□□□□□ -0.85
SNHG1-213ENST00000540725 PTTG1O95997 202 aa9.75□□□□□ -0.85
SNHG1-213ENST00000540725 PYYP10082 97 aa9.75□□□□□ -0.85
SNHG1-213ENST00000540725 CD300CQ08708 224 aa9.75□□□□□ -0.85
SNHG1-213ENST00000540725 IL15RAQ13261 267 aa9.75□□□□□ -0.85
SNHG1-213ENST00000540725 BTN1A1Q13410 526 aa9.75□□□□□ -0.85
SNHG1-213ENST00000540725 PDE6HQ13956 83 aa9.75□□□□□ -0.85
SNHG1-213ENST00000540725 FAM19A4Q96LR4 140 aa9.75□□□□□ -0.85
SNHG1-213ENST00000540725 LINC00477Q96M19 166 aa9.75□□□□□ -0.85
SNHG1-213ENST00000540725 LINC00467Q9BRT7 94 aa9.75□□□□□ -0.85
SNHG1-213ENST00000540725 AGPAT4-IT1Q9H0P7 198 aa9.75□□□□□ -0.85
SNHG1-213ENST00000540725 TIMM9Q9Y5J7 89 aa9.75□□□□□ -0.85
SNHG1-213ENST00000540725 hCG_2014768A0A024R1R8 64 aa9.74□□□□□ -0.85
SNHG1-213ENST00000540725 TRGV1A0A0A0MS02 117 aa9.74□□□□□ -0.85
SNHG1-213ENST00000540725 ZNF324O75467 553 aaPredicted RBP9.74□□□□□ -0.85
SNHG1-213ENST00000540725 H2AFB2P0C5Z0 115 aa9.74□□□□□ -0.85
SNHG1-213ENST00000540725 BTF3P20290 206 aaKnown RBP9.74□□□□□ -0.85
SNHG1-213ENST00000540725 ATP6V1FQ16864 119 aa9.74□□□□□ -0.85
SNHG1-213ENST00000540725 ANXA2RQ3ZCQ2 193 aa9.74□□□□□ -0.85
SNHG1-213ENST00000540725 EXOC3-AS1Q8N2X6 119 aa9.74□□□□□ -0.85
SNHG1-213ENST00000540725 EIF4E3Q8N5X7 224 aaKnown RBP9.74□□□□□ -0.85
SNHG1-213ENST00000540725 BLNKQ8WV28 456 aa9.74□□□□□ -0.85
SNHG1-213ENST00000540725 C18orf15Q96N68 181 aa9.74□□□□□ -0.85
SNHG1-213ENST00000540725 GPN1Q9HCN4 374 aaPredicted RBP9.74□□□□□ -0.85
SNHG1-213ENST00000540725 FUT9Q9Y231 359 aa9.74□□□□□ -0.85
SNHG1-213ENST00000540725 MPDU1O75352 247 aa9.73□□□□□ -0.85
SNHG1-213ENST00000540725 CRISP2P16562 243 aa9.73□□□□□ -0.85
SNHG1-213ENST00000540725 RNASE4P34096 147 aaKnown RBP9.73□□□□□ -0.85
SNHG1-213ENST00000540725 KRTAP10-2P60368 255 aa9.73□□□□□ -0.85
SNHG1-213ENST00000540725 GCSAMLQ5JQS6 135 aa9.73□□□□□ -0.85
SNHG1-213ENST00000540725 AAMDCQ9H7C9 122 aa9.73□□□□□ -0.85
SNHG1-213ENST00000540725 IGKV2-40A0A087WW87 121 aaPredicted RBP9.72□□□□□ -0.85
SNHG1-213ENST00000540725 IGKV2D-40P01614 121 aaPredicted RBP9.72□□□□□ -0.85
SNHG1-213ENST00000540725 GPX1P07203 203 aa9.72□□□□□ -0.85
SNHG1-213ENST00000540725 TCL1AP56279 114 aa9.72□□□□□ -0.85
SNHG1-213ENST00000540725 DEFA1P59665 94 aa9.72□□□□□ -0.85
SNHG1-213ENST00000540725 DEFA3P59666 94 aa9.72□□□□□ -0.85
SNHG1-213ENST00000540725 ICAM4Q14773 271 aa9.72□□□□□ -0.85
SNHG1-213ENST00000540725 C9orf47Q6ZRZ4 202 aa9.72□□□□□ -0.85
SNHG1-213ENST00000540725 NPCDR1Q9BY65 106 aa9.72□□□□□ -0.85
SNHG1-213ENST00000540725 KLF12Q9Y4X4 402 aa9.72□□□□□ -0.85
SNHG1-213ENST00000540725 SPINK4O60575 86 aa9.71□□□□□ -0.86
SNHG1-213ENST00000540725 LINC00315P59091 139 aa9.71□□□□□ -0.86
SNHG1-213ENST00000540725 IBA57Q5T440 356 aaKnown RBP9.71□□□□□ -0.86
SNHG1-213ENST00000540725 TMEM78Q5T7P6 136 aa9.71□□□□□ -0.86
SNHG1-213ENST00000540725 PRR9Q5T870 116 aa9.71□□□□□ -0.86
SNHG1-213ENST00000540725 Q8N1X5 172 aa9.71□□□□□ -0.86
SNHG1-213ENST00000540725 ZFAND2AQ8N6M9 145 aa9.71□□□□□ -0.86
SNHG1-213ENST00000540725 SLC25A2Q9BXI2 301 aa9.71□□□□□ -0.86
SNHG1-213ENST00000540725 FAM240BA0A1B0GVZ2 78 aa9.7□□□□□ -0.86
SNHG1-213ENST00000540725 RGS13O14921 159 aa9.7□□□□□ -0.86
SNHG1-213ENST00000540725 PAX4O43316 350 aa9.7□□□□□ -0.86
SNHG1-213ENST00000540725 NMBP08949 121 aa9.7□□□□□ -0.86
SNHG1-213ENST00000540725 FAM122CQ6P4D5 195 aa9.7□□□□□ -0.86
SNHG1-213ENST00000540725 MIR17HGQ75NE6 70 aa9.7□□□□□ -0.86
SNHG1-213ENST00000540725 THAP6Q8TBB0 222 aa9.7□□□□□ -0.86
SNHG1-213ENST00000540725 ST6GAL2Q96JF0 529 aa9.7□□□□□ -0.86
SNHG1-213ENST00000540725 FAM167A-AS1Q96KT0 104 aa9.7□□□□□ -0.86
SNHG1-213ENST00000540725 VGLL1Q99990 258 aa9.7□□□□□ -0.86
SNHG1-213ENST00000540725 MRPL16Q9NX20 251 aaKnown RBP9.7□□□□□ -0.86
SNHG1-213ENST00000540725 TP53TG3Q9ULZ0 132 aa9.7□□□□□ -0.86
SNHG1-213ENST00000540725 ICOSQ9Y6W8 199 aa9.7□□□□□ -0.86
SNHG1-213ENST00000540725 IGHV1OR15-1A0A075B7D0 117 aa9.69□□□□□ -0.86
SNHG1-213ENST00000540725 SIVA1O15304 175 aa9.69□□□□□ -0.86
SNHG1-213ENST00000540725 IGHV3-53P01767 116 aa9.69□□□□□ -0.86
SNHG1-213ENST00000540725 NBEAP1P0C6P0 100 aa9.69□□□□□ -0.86
SNHG1-213ENST00000540725 NHLH2Q02577 135 aa9.69□□□□□ -0.86
SNHG1-213ENST00000540725 Q6ZQT7 251 aa9.69□□□□□ -0.86
SNHG1-213ENST00000540725 Q6ZRN7 208 aaPredicted RBP9.69□□□□□ -0.86
SNHG1-213ENST00000540725 OR5C1Q8NGR4 320 aa9.69□□□□□ -0.86
SNHG1-213ENST00000540725 ARPC5LQ9BPX5 153 aa9.69□□□□□ -0.86
SNHG1-213ENST00000540725 SCRT2Q9NQ03 307 aa9.69□□□□□ -0.86
SNHG1-213ENST00000540725 ZNF492Q9P255 531 aa9.69□□□□□ -0.86
SNHG1-213ENST00000540725 NXPH4O95158 308 aa9.68□□□□□ -0.86
SNHG1-213ENST00000540725 OR51M1Q9H341 326 aa9.68□□□□□ -0.86
SNHG1-213ENST00000540725 PRO0255Q9UI72 69 aa9.68□□□□□ -0.86
SNHG1-213ENST00000540725 MZT2BQ6NZ67 158 aa9.67□□□□□ -0.86
SNHG1-213ENST00000540725 Q8TAT8 98 aa9.67□□□□□ -0.86
SNHG1-213ENST00000540725 PHYHIPLQ96FC7 376 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms