RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 EPPK1P58107 5090 aaKnown RBP7.36□□□□□ -1.23
CDCA3-208ENST00000540683 BIRC6Q9NR09 4857 aa7.35□□□□□ -1.23
CDCA3-208ENST00000540683 TRAV5A0A0B4J249 113 aa7.35□□□□□ -1.23
CDCA3-208ENST00000540683 LCE2BO14633 110 aa7.35□□□□□ -1.23
CDCA3-208ENST00000540683 OR7C2O60412 319 aa7.35□□□□□ -1.23
CDCA3-208ENST00000540683 DAZ2Q13117 558 aaKnown RBP7.35□□□□□ -1.23
CDCA3-208ENST00000540683 ZNF266Q14584 549 aa7.35□□□□□ -1.23
CDCA3-208ENST00000540683 GFI1BQ5VTD9 330 aa7.35□□□□□ -1.23
CDCA3-208ENST00000540683 MORN5Q5VZ52 161 aa7.35□□□□□ -1.23
CDCA3-208ENST00000540683 C9orf47Q6ZRZ4 202 aa7.35□□□□□ -1.23
CDCA3-208ENST00000540683 ARL6IP6Q8N6S5 226 aa7.35□□□□□ -1.23
CDCA3-208ENST00000540683 CLRN3Q8NCR9 226 aa7.35□□□□□ -1.23
CDCA3-208ENST00000540683 BLNKQ8WV28 456 aa7.35□□□□□ -1.23
CDCA3-208ENST00000540683 NOP10Q9NPE3 64 aaKnown RBP7.35□□□□□ -1.23
CDCA3-208ENST00000540683 TRAV12-3A0A0B4J271 114 aa7.34□□□□□ -1.23
CDCA3-208ENST00000540683 A0A1W2PPV4 95 aa7.34□□□□□ -1.23
CDCA3-208ENST00000540683 RBAKDNA6NC62 111 aa7.34□□□□□ -1.23
CDCA3-208ENST00000540683 H3BTX0 84 aa7.34□□□□□ -1.23
CDCA3-208ENST00000540683 MPC2O95563 127 aa7.34□□□□□ -1.23
CDCA3-208ENST00000540683 NUDT3O95989 172 aa7.34□□□□□ -1.23
CDCA3-208ENST00000540683 CT45A10P0DMU9 189 aa7.34□□□□□ -1.23
CDCA3-208ENST00000540683 CRISP2P16562 243 aa7.34□□□□□ -1.23
CDCA3-208ENST00000540683 M6PRP20645 277 aa7.34□□□□□ -1.23
CDCA3-208ENST00000540683 RPL12P30050 165 aaKnown RBP7.34□□□□□ -1.23
CDCA3-208ENST00000540683 SLAQ13239 276 aa7.34□□□□□ -1.23
CDCA3-208ENST00000540683 ICAM4Q14773 271 aa7.34□□□□□ -1.23
CDCA3-208ENST00000540683 ACOT6Q3I5F7 207 aaPredicted RBP7.34□□□□□ -1.23
CDCA3-208ENST00000540683 ANXA2RQ3ZCQ2 193 aa7.34□□□□□ -1.23
CDCA3-208ENST00000540683 TTC32Q5I0X7 151 aa7.34□□□□□ -1.23
CDCA3-208ENST00000540683 EIF4E3Q8N5X7 224 aaKnown RBP7.34□□□□□ -1.23
CDCA3-208ENST00000540683 GNPNAT1Q96EK6 184 aaPredicted RBP7.34□□□□□ -1.23
CDCA3-208ENST00000540683 ARPC5LQ9BPX5 153 aa7.34□□□□□ -1.23
CDCA3-208ENST00000540683 OR5AC2Q9NZP5 309 aa7.34□□□□□ -1.23
CDCA3-208ENST00000540683 HSPB11Q9Y547 144 aa7.34□□□□□ -1.23
CDCA3-208ENST00000540683 LENEPQ9Y5L5 61 aa7.34□□□□□ -1.23
CDCA3-208ENST00000540683 KMT2AQ03164 3969 aa7.34□□□□□ -1.24
CDCA3-208ENST00000540683 TRGV2A0A075B6R0 118 aa7.33□□□□□ -1.24
CDCA3-208ENST00000540683 KLLNB2CW77 178 aa7.33□□□□□ -1.24
CDCA3-208ENST00000540683 FAM229AH3BQW9 127 aa7.33□□□□□ -1.24
CDCA3-208ENST00000540683 SIX6O95475 246 aa7.33□□□□□ -1.24
CDCA3-208ENST00000540683 SNRPCP09234 159 aaKnown RBP7.33□□□□□ -1.24
CDCA3-208ENST00000540683 AZU1P20160 251 aa7.33□□□□□ -1.24
CDCA3-208ENST00000540683 BTF3P20290 206 aaKnown RBP7.33□□□□□ -1.24
CDCA3-208ENST00000540683 H2BFSP57053 126 aa7.33□□□□□ -1.24
CDCA3-208ENST00000540683 IBA57Q5T440 356 aaKnown RBP7.33□□□□□ -1.24
CDCA3-208ENST00000540683 C1orf134Q5TEV5 83 aa7.33□□□□□ -1.24
CDCA3-208ENST00000540683 PQLC2Q6ZP29 291 aa7.33□□□□□ -1.24
CDCA3-208ENST00000540683 CMTM2Q8TAZ6 248 aa7.33□□□□□ -1.24
CDCA3-208ENST00000540683 C18orf15Q96N68 181 aa7.33□□□□□ -1.24
CDCA3-208ENST00000540683 SLC25A2Q9BXI2 301 aa7.33□□□□□ -1.24
CDCA3-208ENST00000540683 PLAC8L1A1L4L8 177 aa7.32□□□□□ -1.24
CDCA3-208ENST00000540683 PRAC2D3DTV9 90 aa7.32□□□□□ -1.24
CDCA3-208ENST00000540683 NDUFB4O95168 129 aa7.32□□□□□ -1.24
CDCA3-208ENST00000540683 PTTG1O95997 202 aa7.32□□□□□ -1.24
CDCA3-208ENST00000540683 MBP02144 154 aa7.32□□□□□ -1.24
CDCA3-208ENST00000540683 PYYP10082 97 aa7.32□□□□□ -1.24
CDCA3-208ENST00000540683 ZNF138P52744 262 aa7.32□□□□□ -1.24
CDCA3-208ENST00000540683 UBE2L3P68036 154 aaKnown RBP7.32□□□□□ -1.24
CDCA3-208ENST00000540683 OR5I1Q13606 314 aa7.32□□□□□ -1.24
CDCA3-208ENST00000540683 FFAR4Q5NUL3 377 aa7.32□□□□□ -1.24
CDCA3-208ENST00000540683 LINC00612Q8N6U2 182 aa7.32□□□□□ -1.24
CDCA3-208ENST00000540683 TMED6Q8WW62 240 aa7.32□□□□□ -1.24
CDCA3-208ENST00000540683 SERTM2A0A1B0GWG4 89 aa7.31□□□□□ -1.24
CDCA3-208ENST00000540683 PRSS29PA6NIE9 313 aa7.31□□□□□ -1.24
CDCA3-208ENST00000540683 J3KRW8 73 aa7.31□□□□□ -1.24
CDCA3-208ENST00000540683 K7EQM0 130 aa7.31□□□□□ -1.24
CDCA3-208ENST00000540683 M0R3E3 92 aa7.31□□□□□ -1.24
CDCA3-208ENST00000540683 RNASE4P34096 147 aaKnown RBP7.31□□□□□ -1.24
CDCA3-208ENST00000540683 FAM122CQ6P4D5 195 aa7.31□□□□□ -1.24
CDCA3-208ENST00000540683 MIR17HGQ75NE6 70 aa7.31□□□□□ -1.24
CDCA3-208ENST00000540683 EXOC3-AS1Q8N2X6 119 aa7.31□□□□□ -1.24
CDCA3-208ENST00000540683 FXYD5Q96DB9 178 aa7.31□□□□□ -1.24
CDCA3-208ENST00000540683 AGPAT4-IT1Q9H0P7 198 aa7.31□□□□□ -1.24
CDCA3-208ENST00000540683 ZNF492Q9P255 531 aa7.31□□□□□ -1.24
CDCA3-208ENST00000540683 IGHV1OR15-1A0A075B7D0 117 aa7.3□□□□□ -1.24
CDCA3-208ENST00000540683 GAGE12BA1L429 117 aa7.3□□□□□ -1.24
CDCA3-208ENST00000540683 H0YIZ8 118 aa7.3□□□□□ -1.24
CDCA3-208ENST00000540683 M0R2N4 97 aa7.3□□□□□ -1.24
CDCA3-208ENST00000540683 GAGE7O76087 117 aa7.3□□□□□ -1.24
CDCA3-208ENST00000540683 OR10J4P0C629 311 aa7.3□□□□□ -1.24
CDCA3-208ENST00000540683 GAGE12FP0CL80 117 aa7.3□□□□□ -1.24
CDCA3-208ENST00000540683 GAGE12GP0CL81 117 aa7.3□□□□□ -1.24
CDCA3-208ENST00000540683 GAGE12IP0CL82 117 aa7.3□□□□□ -1.24
CDCA3-208ENST00000540683 TCL1AP56279 114 aa7.3□□□□□ -1.24
CDCA3-208ENST00000540683 RANP62826 216 aaKnown RBP7.3□□□□□ -1.24
CDCA3-208ENST00000540683 IFITM3Q01628 133 aa7.3□□□□□ -1.24
CDCA3-208ENST00000540683 ZNF415Q09FC8 603 aa7.3□□□□□ -1.24
CDCA3-208ENST00000540683 ODF1Q14990 250 aa7.3□□□□□ -1.24
CDCA3-208ENST00000540683 Q6ZR54 194 aa7.3□□□□□ -1.24
CDCA3-208ENST00000540683 INO80EQ8NBZ0 244 aaPredicted RBP7.3□□□□□ -1.24
CDCA3-208ENST00000540683 FAM167A-AS1Q96KT0 104 aa7.3□□□□□ -1.24
CDCA3-208ENST00000540683 FAM19A4Q96LR4 140 aa7.3□□□□□ -1.24
CDCA3-208ENST00000540683 MED28Q9H204 178 aa7.3□□□□□ -1.24
CDCA3-208ENST00000540683 OTORQ9NRC9 128 aa7.3□□□□□ -1.24
CDCA3-208ENST00000540683 MBD2Q9UBB5 411 aa7.3□□□□□ -1.24
CDCA3-208ENST00000540683 TRGV11A0A075B6L2 103 aa7.29□□□□□ -1.24
CDCA3-208ENST00000540683 TRAV26-1A0A087WT03 109 aa7.29□□□□□ -1.24
CDCA3-208ENST00000540683 TRGV1A0A0A0MS02 117 aa7.29□□□□□ -1.24
CDCA3-208ENST00000540683 A0A1W2PPQ1 181 aa7.29□□□□□ -1.24
CDCA3-208ENST00000540683 FBLL1A6NHQ2 334 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms