RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 FOXL1Q12952 345 aa7.25□□□□□ -1.25
PAAF1-209ENST00000540659 TCF24Q7RTU0 167 aa7.25□□□□□ -1.25
PAAF1-209ENST00000540659 ZNF738Q8NE65 137 aa7.25□□□□□ -1.25
PAAF1-209ENST00000540659 OR11H1Q8NG94 326 aa7.25□□□□□ -1.25
PAAF1-209ENST00000540659 DPF1Q92782 380 aa7.25□□□□□ -1.25
PAAF1-209ENST00000540659 C20orf173Q96LM9 149 aa7.25□□□□□ -1.25
PAAF1-209ENST00000540659 PYGO2Q9BRQ0 406 aa7.25□□□□□ -1.25
PAAF1-209ENST00000540659 RPP21Q9H633 154 aaKnown RBP7.25□□□□□ -1.25
PAAF1-209ENST00000540659 SRD5A3Q9H8P0 318 aa7.25□□□□□ -1.25
PAAF1-209ENST00000540659 BIN3Q9NQY0 253 aa7.25□□□□□ -1.25
PAAF1-209ENST00000540659 ZNF492Q9P255 531 aa7.25□□□□□ -1.25
PAAF1-209ENST00000540659 PEMTQ9UBM1 199 aa7.25□□□□□ -1.25
PAAF1-209ENST00000540659 ANK2Q01484 3957 aa7.24□□□□□ -1.25
PAAF1-209ENST00000540659 TMEM213A2RRL7 107 aa7.24□□□□□ -1.25
PAAF1-209ENST00000540659 C19orf71A6NCJ1 209 aa7.24□□□□□ -1.25
PAAF1-209ENST00000540659 ZNF705DP0CH99 300 aaPredicted RBP7.24□□□□□ -1.25
PAAF1-209ENST00000540659 ZNF705BP0CI00 300 aaPredicted RBP7.24□□□□□ -1.25
PAAF1-209ENST00000540659 TFPI2P48307 235 aa7.24□□□□□ -1.25
PAAF1-209ENST00000540659 REC114Q7Z4M0 266 aa7.24□□□□□ -1.25
PAAF1-209ENST00000540659 OR1N2Q8NGR9 330 aa7.24□□□□□ -1.25
PAAF1-209ENST00000540659 C4orf3Q8WVX3 66 aa7.24□□□□□ -1.25
PAAF1-209ENST00000540659 SAV1Q9H4B6 383 aaPredicted RBP7.24□□□□□ -1.25
PAAF1-209ENST00000540659 ZFP30Q9Y2G7 519 aa7.24□□□□□ -1.25
PAAF1-209ENST00000540659 SMIM27A0A1W2PRY6 76 aa7.23□□□□□ -1.25
PAAF1-209ENST00000540659 LGALS9O00182 355 aa7.23□□□□□ -1.25
PAAF1-209ENST00000540659 S100A6P06703 90 aa7.23□□□□□ -1.25
PAAF1-209ENST00000540659 TRGC1P0CF51 173 aa7.23□□□□□ -1.25
PAAF1-209ENST00000540659 CT45A10P0DMU9 189 aa7.23□□□□□ -1.25
PAAF1-209ENST00000540659 DEFB1P60022 68 aa7.23□□□□□ -1.25
PAAF1-209ENST00000540659 FABP9Q0Z7S8 132 aa7.23□□□□□ -1.25
PAAF1-209ENST00000540659 MRPL54Q6P161 138 aaKnown RBP7.23□□□□□ -1.25
PAAF1-209ENST00000540659 LINC01006Q8NI28 216 aa7.23□□□□□ -1.25
PAAF1-209ENST00000540659 FRZBQ92765 325 aa7.23□□□□□ -1.25
PAAF1-209ENST00000540659 BTF3L4Q96K17 158 aa7.23□□□□□ -1.25
PAAF1-209ENST00000540659 MDFIQ99750 246 aa7.23□□□□□ -1.25
PAAF1-209ENST00000540659 NDFIP1Q9BT67 221 aa7.23□□□□□ -1.25
PAAF1-209ENST00000540659 GPR61Q9BZJ8 451 aa7.23□□□□□ -1.25
PAAF1-209ENST00000540659 NRN1Q9NPD7 142 aa7.23□□□□□ -1.25
PAAF1-209ENST00000540659 TRAPPC1Q9Y5R8 145 aa7.23□□□□□ -1.25
PAAF1-209ENST00000540659 TSSC4Q9Y5U2 329 aaPredicted RBP7.23□□□□□ -1.25
PAAF1-209ENST00000540659 IZUMO1RA6ND01 250 aa7.22□□□□□ -1.25
PAAF1-209ENST00000540659 C2orf70A6NJV1 201 aa7.22□□□□□ -1.25
PAAF1-209ENST00000540659 A8MWP6 167 aa7.22□□□□□ -1.25
PAAF1-209ENST00000540659 SOCS3O14543 225 aa7.22□□□□□ -1.25
PAAF1-209ENST00000540659 TYMSP04818 313 aa7.22□□□□□ -1.25
PAAF1-209ENST00000540659 FRMD6-AS1P0C7T7 363 aa7.22□□□□□ -1.25
PAAF1-209ENST00000540659 GZMBP10144 247 aa7.22□□□□□ -1.25
PAAF1-209ENST00000540659 CRIP1P50238 77 aa7.22□□□□□ -1.25
PAAF1-209ENST00000540659 NDUFA6P56556 154 aa7.22□□□□□ -1.25
PAAF1-209ENST00000540659 SNRPEP62304 92 aaKnown RBP7.22□□□□□ -1.25
PAAF1-209ENST00000540659 PAFAH1B2P68402 229 aa7.22□□□□□ -1.25
PAAF1-209ENST00000540659 RPL19P84098 196 aaKnown RBP7.22□□□□□ -1.25
PAAF1-209ENST00000540659 KLF5Q13887 457 aaPredicted RBP7.22□□□□□ -1.25
PAAF1-209ENST00000540659 KRTAP24-1Q3LI83 254 aa7.22□□□□□ -1.25
PAAF1-209ENST00000540659 SAPCD1Q5SSQ6 148 aa7.22□□□□□ -1.25
PAAF1-209ENST00000540659 TMEM78Q5T7P6 136 aa7.22□□□□□ -1.25
PAAF1-209ENST00000540659 OR2D3Q8NGH3 330 aa7.22□□□□□ -1.25
PAAF1-209ENST00000540659 MRPL53Q96EL3 112 aaKnown RBP7.22□□□□□ -1.25
PAAF1-209ENST00000540659 PRR25Q96S07 402 aa7.22□□□□□ -1.25
PAAF1-209ENST00000540659 NAT8BQ9UHF3 227 aa7.22□□□□□ -1.25
PAAF1-209ENST00000540659 RNF114Q9Y508 228 aa7.22□□□□□ -1.25
PAAF1-209ENST00000540659 STAB1Q9NY15 2570 aa7.22□□□□□ -1.25
PAAF1-209ENST00000540659 DNHD1Q96M86 4753 aa7.21□□□□□ -1.25
PAAF1-209ENST00000540659 TRAV9-1A0A075B6T8 112 aa7.21□□□□□ -1.26
PAAF1-209ENST00000540659 TMSB15BA0A087X1C1 80 aa7.21□□□□□ -1.26
PAAF1-209ENST00000540659 RBAKDNA6NC62 111 aa7.21□□□□□ -1.26
PAAF1-209ENST00000540659 SNURFLB1AK76 121 aa7.21□□□□□ -1.26
PAAF1-209ENST00000540659 F6UB75 175 aa7.21□□□□□ -1.26
PAAF1-209ENST00000540659 J3KRW8 73 aa7.21□□□□□ -1.26
PAAF1-209ENST00000540659 SH2D1AO60880 128 aa7.21□□□□□ -1.26
PAAF1-209ENST00000540659 CBLN1P23435 193 aa7.21□□□□□ -1.26
PAAF1-209ENST00000540659 ZNF80P51504 273 aaPredicted RBP7.21□□□□□ -1.26
PAAF1-209ENST00000540659 RAB4BP61018 213 aa7.21□□□□□ -1.26
PAAF1-209ENST00000540659 SMUG1Q53HV7 270 aa7.21□□□□□ -1.26
PAAF1-209ENST00000540659 ACTL10Q5JWF8 245 aa7.21□□□□□ -1.26
PAAF1-209ENST00000540659 NUP35Q8NFH5 326 aa7.21□□□□□ -1.26
PAAF1-209ENST00000540659 TSKUQ8WUA8 353 aa7.21□□□□□ -1.26
PAAF1-209ENST00000540659 DLX4Q92988 240 aaPredicted RBP7.21□□□□□ -1.26
PAAF1-209ENST00000540659 PGLYRP4Q96LB8 373 aa7.21□□□□□ -1.26
PAAF1-209ENST00000540659 NEU1Q99519 415 aa7.21□□□□□ -1.26
PAAF1-209ENST00000540659 CITED2Q99967 270 aaPredicted RBP7.21□□□□□ -1.26
PAAF1-209ENST00000540659 AGPAT4-IT1Q9H0P7 198 aa7.21□□□□□ -1.26
PAAF1-209ENST00000540659 MS4A6AQ9H2W1 248 aa7.21□□□□□ -1.26
PAAF1-209ENST00000540659 TMEM189A5PLL7 270 aa7.2□□□□□ -1.26
PAAF1-209ENST00000540659 HIGD1CA8MV81 97 aa7.2□□□□□ -1.26
PAAF1-209ENST00000540659 A8MWL6 223 aa7.2□□□□□ -1.26
PAAF1-209ENST00000540659 OVOL1O14753 267 aa7.2□□□□□ -1.26
PAAF1-209ENST00000540659 HIST1H2BKO60814 126 aa7.2□□□□□ -1.26
PAAF1-209ENST00000540659 HIST1H2BJP06899 126 aa7.2□□□□□ -1.26
PAAF1-209ENST00000540659 HIST1H2BOP23527 126 aa7.2□□□□□ -1.26
PAAF1-209ENST00000540659 HIST1H2BBP33778 126 aa7.2□□□□□ -1.26
PAAF1-209ENST00000540659 ID1P41134 155 aa7.2□□□□□ -1.26
PAAF1-209ENST00000540659 ZNF138P52744 262 aa7.2□□□□□ -1.26
PAAF1-209ENST00000540659 HIST1H2BDP58876 126 aa7.2□□□□□ -1.26
PAAF1-209ENST00000540659 HIST1H2BCP62807 126 aa7.2□□□□□ -1.26
PAAF1-209ENST00000540659 HIST1H1AQ02539 215 aaPredicted RBP7.2□□□□□ -1.26
PAAF1-209ENST00000540659 HIST2H2BEQ16778 126 aa7.2□□□□□ -1.26
PAAF1-209ENST00000540659 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.2□□□□□ -1.26
PAAF1-209ENST00000540659 OR4B1Q8NGF8 309 aa7.2□□□□□ -1.26
PAAF1-209ENST00000540659 OR10J6PQ8NGY7 276 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms