RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 OR10G4Q8NGN3 311 aa10.69□□□□□ -0.7
UBE3B-212ENST00000540230 OR10G9Q8NGN4 311 aa10.69□□□□□ -0.7
UBE3B-212ENST00000540230 OR10G7Q8NGN6 311 aa10.69□□□□□ -0.7
UBE3B-212ENST00000540230 Q9H3A6 140 aa10.69□□□□□ -0.7
UBE3B-212ENST00000540230 DNAH10Q8IVF4 4471 aa10.69□□□□□ -0.7
UBE3B-212ENST00000540230 TEX48A0A1B0GUV7 120 aa10.68□□□□□ -0.7
UBE3B-212ENST00000540230 H7BYZ3 331 aa10.68□□□□□ -0.7
UBE3B-212ENST00000540230 BTN1A1Q13410 526 aa10.68□□□□□ -0.7
UBE3B-212ENST00000540230 PRR9Q5T870 116 aa10.68□□□□□ -0.7
UBE3B-212ENST00000540230 C9orf47Q6ZRZ4 202 aa10.68□□□□□ -0.7
UBE3B-212ENST00000540230 INO80EQ8NBZ0 244 aaPredicted RBP10.68□□□□□ -0.7
UBE3B-212ENST00000540230 OR2G3Q8NGZ4 309 aa10.68□□□□□ -0.7
UBE3B-212ENST00000540230 RNASE8Q8TDE3 154 aaKnown RBP10.68□□□□□ -0.7
UBE3B-212ENST00000540230 C20orf144Q9BQM9 153 aa10.68□□□□□ -0.7
UBE3B-212ENST00000540230 BOLA1Q9Y3E2 137 aa10.68□□□□□ -0.7
UBE3B-212ENST00000540230 A0A1W2PPV4 95 aa10.68□□□□□ -0.7
UBE3B-212ENST00000540230 KLLNB2CW77 178 aa10.68□□□□□ -0.7
UBE3B-212ENST00000540230 HTN3P15516 51 aa10.68□□□□□ -0.7
UBE3B-212ENST00000540230 TCTAP57738 103 aa10.68□□□□□ -0.7
UBE3B-212ENST00000540230 DAD1P61803 113 aa10.68□□□□□ -0.7
UBE3B-212ENST00000540230 CD300CQ08708 224 aa10.68□□□□□ -0.7
UBE3B-212ENST00000540230 Q6ZQT7 251 aa10.68□□□□□ -0.7
UBE3B-212ENST00000540230 Q8TAT8 98 aa10.68□□□□□ -0.7
UBE3B-212ENST00000540230 LINC00477Q96M19 166 aa10.68□□□□□ -0.7
UBE3B-212ENST00000540230 PSMG3Q9BT73 122 aaPredicted RBP10.68□□□□□ -0.7
UBE3B-212ENST00000540230 LYRM9A8MSI8 78 aa10.67□□□□□ -0.7
UBE3B-212ENST00000540230 CDC34P49427 236 aaPredicted RBP10.67□□□□□ -0.7
UBE3B-212ENST00000540230 ZFAND2AQ8N6M9 145 aa10.67□□□□□ -0.7
UBE3B-212ENST00000540230 TMEM263Q8WUH6 116 aaKnown RBP10.67□□□□□ -0.7
UBE3B-212ENST00000540230 C16orf74Q96GX8 76 aa10.67□□□□□ -0.7
UBE3B-212ENST00000540230 C7orf71A4D174 169 aa10.66□□□□□ -0.7
UBE3B-212ENST00000540230 ARPC5O15511 151 aa10.66□□□□□ -0.7
UBE3B-212ENST00000540230 SLC25A5P05141 298 aaKnown RBP10.66□□□□□ -0.7
UBE3B-212ENST00000540230 ARL14EPLP0DKL9 152 aa10.66□□□□□ -0.7
UBE3B-212ENST00000540230 DEFB130BP0DP73 79 aa10.66□□□□□ -0.7
UBE3B-212ENST00000540230 DEFB130AP0DP74 79 aa10.66□□□□□ -0.7
UBE3B-212ENST00000540230 CRISP2P16562 243 aa10.66□□□□□ -0.7
UBE3B-212ENST00000540230 PQLC2Q6ZP29 291 aa10.66□□□□□ -0.7
UBE3B-212ENST00000540230 SSX7Q7RTT5 188 aa10.66□□□□□ -0.7
UBE3B-212ENST00000540230 LYPD1Q8N2G4 141 aa10.66□□□□□ -0.7
UBE3B-212ENST00000540230 ZNF492Q9P255 531 aa10.66□□□□□ -0.7
UBE3B-212ENST00000540230 ZNF324O75467 553 aaPredicted RBP10.65□□□□□ -0.7
UBE3B-212ENST00000540230 STAG3L2P0CL84 134 aa10.65□□□□□ -0.7
UBE3B-212ENST00000540230 STAG3L3P0CL85 134 aa10.65□□□□□ -0.7
UBE3B-212ENST00000540230 TMEM78Q5T7P6 136 aa10.65□□□□□ -0.7
UBE3B-212ENST00000540230 RAB24Q969Q5 203 aa10.65□□□□□ -0.7
UBE3B-212ENST00000540230 HYLS1Q96M11 299 aa10.65□□□□□ -0.7
UBE3B-212ENST00000540230 NOP10Q9NPE3 64 aaKnown RBP10.65□□□□□ -0.7
UBE3B-212ENST00000540230 PGPA6NDG6 321 aa10.64□□□□□ -0.71
UBE3B-212ENST00000540230 DIRC3C9JPN6 131 aa10.64□□□□□ -0.71
UBE3B-212ENST00000540230 RNASE4P34096 147 aaKnown RBP10.64□□□□□ -0.71
UBE3B-212ENST00000540230 ZNF493Q6ZR52 646 aa10.64□□□□□ -0.71
UBE3B-212ENST00000540230 NDUFAF3Q9BU61 184 aa10.64□□□□□ -0.71
UBE3B-212ENST00000540230 RPH3ALQ9UNE2 315 aa10.64□□□□□ -0.71
UBE3B-212ENST00000540230 TIMM8BQ9Y5J9 83 aaPredicted RBP10.64□□□□□ -0.71
UBE3B-212ENST00000540230 DNAH2Q9P225 4427 aa10.64□□□□□ -0.71
UBE3B-212ENST00000540230 CSN1S1P47710 185 aa10.63□□□□□ -0.71
UBE3B-212ENST00000540230 ZNF138P52744 262 aa10.63□□□□□ -0.71
UBE3B-212ENST00000540230 SERF2P84101 59 aa10.63□□□□□ -0.71
UBE3B-212ENST00000540230 OR11H4Q8NGC9 324 aa10.63□□□□□ -0.71
UBE3B-212ENST00000540230 PYGO2Q9BRQ0 406 aa10.63□□□□□ -0.71
UBE3B-212ENST00000540230 OTORQ9NRC9 128 aa10.63□□□□□ -0.71
UBE3B-212ENST00000540230 CYTL1Q9NRR1 136 aa10.63□□□□□ -0.71
UBE3B-212ENST00000540230 RBAKDNA6NC62 111 aa10.63□□□□□ -0.71
UBE3B-212ENST00000540230 GPX1P07203 203 aa10.63□□□□□ -0.71
UBE3B-212ENST00000540230 GNG5P63218 68 aa10.63□□□□□ -0.71
UBE3B-212ENST00000540230 ZNF726P1Q15940 193 aa10.63□□□□□ -0.71
UBE3B-212ENST00000540230 TMEM88Q6PEY1 159 aa10.63□□□□□ -0.71
UBE3B-212ENST00000540230 BORCS7-ASMTA0A0B4J1R7 106 aa10.62□□□□□ -0.71
UBE3B-212ENST00000540230 GCHFRP30047 84 aa10.62□□□□□ -0.71
UBE3B-212ENST00000540230 CCDC28AQ8IWP9 274 aa10.62□□□□□ -0.71
UBE3B-212ENST00000540230 GNPNAT1Q96EK6 184 aaPredicted RBP10.62□□□□□ -0.71
UBE3B-212ENST00000540230 TP53TG3Q9ULZ0 132 aa10.62□□□□□ -0.71
UBE3B-212ENST00000540230 MBP02144 154 aa10.61□□□□□ -0.71
UBE3B-212ENST00000540230 NMBP08949 121 aa10.61□□□□□ -0.71
UBE3B-212ENST00000540230 GOLT1AQ6ZVE7 132 aa10.61□□□□□ -0.71
UBE3B-212ENST00000540230 LINC00612Q8N6U2 182 aa10.61□□□□□ -0.71
UBE3B-212ENST00000540230 C11orf72Q8NBR9 251 aa10.61□□□□□ -0.71
UBE3B-212ENST00000540230 SUN5Q8TC36 379 aa10.61□□□□□ -0.71
UBE3B-212ENST00000540230 RXFP4Q8TDU9 374 aa10.61□□□□□ -0.71
UBE3B-212ENST00000540230 TRAV8-1A0A0A6YYK1 113 aa10.6□□□□□ -0.71
UBE3B-212ENST00000540230 CMTM2Q8TAZ6 248 aa10.6□□□□□ -0.71
UBE3B-212ENST00000540230 FAM210BQ96KR6 192 aa10.6□□□□□ -0.71
UBE3B-212ENST00000540230 LINC00467Q9BRT7 94 aa10.6□□□□□ -0.71
UBE3B-212ENST00000540230 ACTR3CQ9C0K3 210 aaPredicted RBP10.6□□□□□ -0.71
UBE3B-212ENST00000540230 GSN-AS1Q9NRJ2 163 aa10.6□□□□□ -0.71
UBE3B-212ENST00000540230 BIRC6Q9NR09 4857 aa10.6□□□□□ -0.71
UBE3B-212ENST00000540230 TRBV7-9A0A0J9YWB2 115 aa10.59□□□□□ -0.71
UBE3B-212ENST00000540230 GAGE12BA1L429 117 aa10.59□□□□□ -0.71
UBE3B-212ENST00000540230 CBY3A6NI87 242 aa10.59□□□□□ -0.71
UBE3B-212ENST00000540230 SNURFLB1AK76 121 aa10.59□□□□□ -0.71
UBE3B-212ENST00000540230 F5H768 121 aa10.59□□□□□ -0.71
UBE3B-212ENST00000540230 GAGE7O76087 117 aa10.59□□□□□ -0.71
UBE3B-212ENST00000540230 GAGE12FP0CL80 117 aa10.59□□□□□ -0.71
UBE3B-212ENST00000540230 GAGE12GP0CL81 117 aa10.59□□□□□ -0.71
UBE3B-212ENST00000540230 GAGE12IP0CL82 117 aa10.59□□□□□ -0.71
UBE3B-212ENST00000540230 EIF4E3Q8N5X7 224 aaKnown RBP10.59□□□□□ -0.71
UBE3B-212ENST00000540230 TVP23CQ96ET8 276 aa10.59□□□□□ -0.71
UBE3B-212ENST00000540230 GGTLC3B5MD39 225 aa10.58□□□□□ -0.72
UBE3B-212ENST00000540230 TAAR5O14804 337 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms