RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 FAM19A4Q96LR4 140 aa9.58□□□□□ -0.88
CCDC130-202ENST00000540216 NIPSNAP3BQ9BS92 247 aa9.58□□□□□ -0.88
CCDC130-202ENST00000540216 AGPAT4-IT1Q9H0P7 198 aa9.58□□□□□ -0.88
CCDC130-202ENST00000540216 SH3BGRL3Q9H299 93 aa9.58□□□□□ -0.88
CCDC130-202ENST00000540216 IGKV2-40A0A087WW87 121 aaPredicted RBP9.57□□□□□ -0.88
CCDC130-202ENST00000540216 DEFB131BA0A096LNP1 70 aa9.57□□□□□ -0.88
CCDC130-202ENST00000540216 C7orf71A4D174 169 aa9.57□□□□□ -0.88
CCDC130-202ENST00000540216 LYRM9A8MSI8 78 aa9.57□□□□□ -0.88
CCDC130-202ENST00000540216 HMSDA8MTL9 139 aa9.57□□□□□ -0.88
CCDC130-202ENST00000540216 KLLNB2CW77 178 aa9.57□□□□□ -0.88
CCDC130-202ENST00000540216 IGKV2D-40P01614 121 aaPredicted RBP9.57□□□□□ -0.88
CCDC130-202ENST00000540216 ARL14EPLP0DKL9 152 aa9.57□□□□□ -0.88
CCDC130-202ENST00000540216 CRISP2P16562 243 aa9.57□□□□□ -0.88
CCDC130-202ENST00000540216 RAB24Q969Q5 203 aa9.57□□□□□ -0.88
CCDC130-202ENST00000540216 ACTR3CQ9C0K3 210 aaPredicted RBP9.57□□□□□ -0.88
CCDC130-202ENST00000540216 OTORQ9NRC9 128 aa9.57□□□□□ -0.88
CCDC130-202ENST00000540216 KIR3DS1Q14943 382 aa9.56□□□□□ -0.88
CCDC130-202ENST00000540216 ZNF767PQ75MW2 155 aa9.56□□□□□ -0.88
CCDC130-202ENST00000540216 CCDC28AQ8IWP9 274 aa9.56□□□□□ -0.88
CCDC130-202ENST00000540216 KCNRGQ8N5I3 272 aa9.56□□□□□ -0.88
CCDC130-202ENST00000540216 CMTM2Q8TAZ6 248 aa9.56□□□□□ -0.88
CCDC130-202ENST00000540216 TMEM263Q8WUH6 116 aaKnown RBP9.56□□□□□ -0.88
CCDC130-202ENST00000540216 PYGO2Q9BRQ0 406 aa9.56□□□□□ -0.88
CCDC130-202ENST00000540216 ZNF492Q9P255 531 aa9.56□□□□□ -0.88
CCDC130-202ENST00000540216 STARD9Q9P2P6 4700 aa9.56□□□□□ -0.88
CCDC130-202ENST00000540216 A0A0D9SG52 128 aa9.55□□□□□ -0.88
CCDC130-202ENST00000540216 PLAC8L1A1L4L8 177 aa9.55□□□□□ -0.88
CCDC130-202ENST00000540216 IGLL5B9A064 214 aa9.55□□□□□ -0.88
CCDC130-202ENST00000540216 SMLR1H3BR10 107 aa9.55□□□□□ -0.88
CCDC130-202ENST00000540216 HMGB3O15347 200 aaKnown RBP9.55□□□□□ -0.88
CCDC130-202ENST00000540216 EIF3GO75821 320 aaKnown RBP eCLIP9.55□□□□□ -0.88
CCDC130-202ENST00000540216 CXorf1O96002 111 aa9.55□□□□□ -0.88
CCDC130-202ENST00000540216 GCHFRP30047 84 aa9.55□□□□□ -0.88
CCDC130-202ENST00000540216 ZNF138P52744 262 aa9.55□□□□□ -0.88
CCDC130-202ENST00000540216 DAD1P61803 113 aa9.55□□□□□ -0.88
CCDC130-202ENST00000540216 SUN5Q8TC36 379 aa9.55□□□□□ -0.88
CCDC130-202ENST00000540216 RNASE8Q8TDE3 154 aaKnown RBP9.55□□□□□ -0.88
CCDC130-202ENST00000540216 VGLL1Q99990 258 aa9.55□□□□□ -0.88
CCDC130-202ENST00000540216 ARPC5LQ9BPX5 153 aa9.55□□□□□ -0.88
CCDC130-202ENST00000540216 CYTL1Q9NRR1 136 aa9.55□□□□□ -0.88
CCDC130-202ENST00000540216 TMEM167BQ9NRX6 74 aa9.55□□□□□ -0.88
CCDC130-202ENST00000540216 LENEPQ9Y5L5 61 aa9.55□□□□□ -0.88
CCDC130-202ENST00000540216 TRAV12-3A0A0B4J271 114 aa9.54□□□□□ -0.88
CCDC130-202ENST00000540216 PGPA6NDG6 321 aa9.54□□□□□ -0.88
CCDC130-202ENST00000540216 DIRC3C9JPN6 131 aa9.54□□□□□ -0.88
CCDC130-202ENST00000540216 J3KRW8 73 aa9.54□□□□□ -0.88
CCDC130-202ENST00000540216 PRM2P04554 102 aa9.54□□□□□ -0.88
CCDC130-202ENST00000540216 GPX1P07203 203 aa9.54□□□□□ -0.88
CCDC130-202ENST00000540216 HTN1P15515 57 aa9.54□□□□□ -0.88
CCDC130-202ENST00000540216 AZU1P20160 251 aa9.54□□□□□ -0.88
CCDC130-202ENST00000540216 AKR1C8PQ5T2L2 129 aa9.54□□□□□ -0.88
CCDC130-202ENST00000540216 ZFAND2AQ8N6M9 145 aa9.54□□□□□ -0.88
CCDC130-202ENST00000540216 TMED6Q8WW62 240 aa9.54□□□□□ -0.88
CCDC130-202ENST00000540216 FAM210BQ96KR6 192 aa9.54□□□□□ -0.88
CCDC130-202ENST00000540216 LINC00467Q9BRT7 94 aa9.54□□□□□ -0.88
CCDC130-202ENST00000540216 TIMM8BQ9Y5J9 83 aaPredicted RBP9.54□□□□□ -0.88
CCDC130-202ENST00000540216 IGHV4-4A0A075B6R2 117 aa9.53□□□□□ -0.88
CCDC130-202ENST00000540216 CTXND1A0A1B0GTU2 59 aa9.53□□□□□ -0.88
CCDC130-202ENST00000540216 SERTM2A0A1B0GWG4 89 aa9.53□□□□□ -0.88
CCDC130-202ENST00000540216 LY6G6CO95867 125 aa9.53□□□□□ -0.88
CCDC130-202ENST00000540216 LGALS9CQ6DKI2 356 aa9.53□□□□□ -0.88
CCDC130-202ENST00000540216 OR11H4Q8NGC9 324 aa9.53□□□□□ -0.88
CCDC130-202ENST00000540216 ST6GAL2Q96JF0 529 aa9.53□□□□□ -0.88
CCDC130-202ENST00000540216 HYLS1Q96M11 299 aa9.53□□□□□ -0.88
CCDC130-202ENST00000540216 APLNQ9ULZ1 77 aa9.53□□□□□ -0.88
CCDC130-202ENST00000540216 KANTRA0A1W2PQU2 76 aa9.52□□□□□ -0.89
CCDC130-202ENST00000540216 ZNF324O75467 553 aaPredicted RBP9.52□□□□□ -0.89
CCDC130-202ENST00000540216 RNASE4P34096 147 aaKnown RBP9.52□□□□□ -0.89
CCDC130-202ENST00000540216 CD300CQ08708 224 aa9.52□□□□□ -0.89
CCDC130-202ENST00000540216 BTN1A1Q13410 526 aa9.52□□□□□ -0.89
CCDC130-202ENST00000540216 C5orf17Q8NAS9 161 aa9.52□□□□□ -0.89
CCDC130-202ENST00000540216 ZNF680Q8NEM1 530 aa9.52□□□□□ -0.89
CCDC130-202ENST00000540216 Q8TAT8 98 aa9.52□□□□□ -0.89
CCDC130-202ENST00000540216 SNURFLB1AK76 121 aa9.51□□□□□ -0.89
CCDC130-202ENST00000540216 BCL2L11O43521 198 aa9.51□□□□□ -0.89
CCDC130-202ENST00000540216 EIF5AP63241 154 aaKnown RBP9.51□□□□□ -0.89
CCDC130-202ENST00000540216 ANXA2RQ3ZCQ2 193 aa9.51□□□□□ -0.89
CCDC130-202ENST00000540216 Q6ZNX1 250 aa9.51□□□□□ -0.89
CCDC130-202ENST00000540216 GOLT1AQ6ZVE7 132 aa9.51□□□□□ -0.89
CCDC130-202ENST00000540216 SSX7Q7RTT5 188 aa9.51□□□□□ -0.89
CCDC130-202ENST00000540216 TCTE3Q8IZS6 198 aa9.51□□□□□ -0.89
CCDC130-202ENST00000540216 NDUFAF3Q9BU61 184 aa9.51□□□□□ -0.89
CCDC130-202ENST00000540216 A0A1W2PRE2 83 aa9.5□□□□□ -0.89
CCDC130-202ENST00000540216 K7EQM0 130 aa9.5□□□□□ -0.89
CCDC130-202ENST00000540216 SEC11BP0C7V7 166 aa9.5□□□□□ -0.89
CCDC130-202ENST00000540216 DEFB130BP0DP73 79 aa9.5□□□□□ -0.89
CCDC130-202ENST00000540216 DEFB130AP0DP74 79 aa9.5□□□□□ -0.89
CCDC130-202ENST00000540216 ZNF726P1Q15940 193 aa9.5□□□□□ -0.89
CCDC130-202ENST00000540216 IQCF2Q8IXL9 164 aa9.5□□□□□ -0.89
CCDC130-202ENST00000540216 EIF4E3Q8N5X7 224 aaKnown RBP9.5□□□□□ -0.89
CCDC130-202ENST00000540216 NOP10Q9NPE3 64 aaKnown RBP9.5□□□□□ -0.89
CCDC130-202ENST00000540216 PLA2G2EQ9NZK7 142 aa9.5□□□□□ -0.89
CCDC130-202ENST00000540216 RPH3ALQ9UNE2 315 aa9.5□□□□□ -0.89
CCDC130-202ENST00000540216 CBY3A6NI87 242 aa9.49□□□□□ -0.89
CCDC130-202ENST00000540216 UMAD1C9J7I0 102 aa9.49□□□□□ -0.89
CCDC130-202ENST00000540216 RGS13O14921 159 aa9.49□□□□□ -0.89
CCDC130-202ENST00000540216 PFDN1O60925 122 aa9.49□□□□□ -0.89
CCDC130-202ENST00000540216 HTN3P15516 51 aa9.49□□□□□ -0.89
CCDC130-202ENST00000540216 DAZ2Q13117 558 aaKnown RBP9.49□□□□□ -0.89
CCDC130-202ENST00000540216 PRR9Q5T870 116 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms