RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 NDUFA4L2Q9NRX3 87 aa7.97□□□□□ -1.13
TRAF1-202ENST00000540010 SNCGO76070 127 aa7.97□□□□□ -1.13
TRAF1-202ENST00000540010 Q86TA4 180 aa7.97□□□□□ -1.13
TRAF1-202ENST00000540010 A0A1B0GV72 72 aa7.97□□□□□ -1.13
TRAF1-202ENST00000540010 ZNF815PA8K554 130 aa7.97□□□□□ -1.13
TRAF1-202ENST00000540010 ABCA2Q9BZC7 2435 aa7.96□□□□□ -1.13
TRAF1-202ENST00000540010 PSG3Q16557 428 aa7.96□□□□□ -1.13
TRAF1-202ENST00000540010 MEIG1Q5JSS6 88 aa7.96□□□□□ -1.13
TRAF1-202ENST00000540010 COA6Q5JTJ3 125 aaKnown RBP7.96□□□□□ -1.13
TRAF1-202ENST00000540010 GTSF1LQ9H1H1 148 aa7.96□□□□□ -1.13
TRAF1-202ENST00000540010 KAAG1Q9UBP8 84 aa7.96□□□□□ -1.13
TRAF1-202ENST00000540010 ADGRG4Q8IZF6 3080 aa7.96□□□□□ -1.14
TRAF1-202ENST00000540010 BUB1B-PAK6H3BSN5 160 aa7.96□□□□□ -1.14
TRAF1-202ENST00000540010 EMP1P54849 157 aa7.96□□□□□ -1.14
TRAF1-202ENST00000540010 SUMO2P61956 95 aaKnown RBP7.96□□□□□ -1.14
TRAF1-202ENST00000540010 SNRPD3P62318 126 aaKnown RBP7.96□□□□□ -1.14
TRAF1-202ENST00000540010 TMEM155Q4W5P6 130 aa7.96□□□□□ -1.14
TRAF1-202ENST00000540010 PRSS57Q6UWY2 283 aa7.96□□□□□ -1.14
TRAF1-202ENST00000540010 TMEM158Q8WZ71 300 aa7.96□□□□□ -1.14
TRAF1-202ENST00000540010 SLC25A2Q9BXI2 301 aa7.96□□□□□ -1.14
TRAF1-202ENST00000540010 A0A0U1RRA0 63 aa7.96□□□□□ -1.14
TRAF1-202ENST00000540010 SSBP2P81877 361 aaPredicted RBP7.96□□□□□ -1.14
TRAF1-202ENST00000540010 PRR20EP86478 221 aa7.96□□□□□ -1.14
TRAF1-202ENST00000540010 PRR20CP86479 221 aa7.96□□□□□ -1.14
TRAF1-202ENST00000540010 PRR20DP86480 221 aa7.96□□□□□ -1.14
TRAF1-202ENST00000540010 PRR20BP86481 221 aa7.96□□□□□ -1.14
TRAF1-202ENST00000540010 PRR20AP86496 221 aa7.96□□□□□ -1.14
TRAF1-202ENST00000540010 MTURNQ8N3F0 131 aa7.96□□□□□ -1.14
TRAF1-202ENST00000540010 OR9G4Q8NGQ1 327 aa7.96□□□□□ -1.14
TRAF1-202ENST00000540010 MRAP2Q96G30 205 aa7.96□□□□□ -1.14
TRAF1-202ENST00000540010 SLC50A1Q9BRV3 221 aa7.96□□□□□ -1.14
TRAF1-202ENST00000540010 FNDC10F2Z333 226 aa7.95□□□□□ -1.14
TRAF1-202ENST00000540010 CENPVQ7Z7K6 275 aaPredicted RBP7.95□□□□□ -1.14
TRAF1-202ENST00000540010 TNFRSF14Q92956 283 aa7.95□□□□□ -1.14
TRAF1-202ENST00000540010 C5orf64Q2M2E5 130 aa7.95□□□□□ -1.14
TRAF1-202ENST00000540010 TEX43Q6ZNM6 134 aa7.95□□□□□ -1.14
TRAF1-202ENST00000540010 NEU4Q8WWR8 484 aaPredicted RBP7.95□□□□□ -1.14
TRAF1-202ENST00000540010 C7orf69Q9H7B7 122 aa7.95□□□□□ -1.14
TRAF1-202ENST00000540010 FAM231BA6NCW3 169 aa7.95□□□□□ -1.14
TRAF1-202ENST00000540010 HOXA3O43365 443 aaPredicted RBP7.95□□□□□ -1.14
TRAF1-202ENST00000540010 CD5LO43866 347 aa7.95□□□□□ -1.14
TRAF1-202ENST00000540010 ERCC8Q13216 396 aa7.95□□□□□ -1.14
TRAF1-202ENST00000540010 C11orf52Q96A22 123 aa7.95□□□□□ -1.14
TRAF1-202ENST00000540010 CST9LQ9H4G1 147 aa7.95□□□□□ -1.14
TRAF1-202ENST00000540010 LINC00574Q9H8X3 128 aa7.95□□□□□ -1.14
TRAF1-202ENST00000540010 TLN2Q9Y4G6 2542 aa7.95□□□□□ -1.14
TRAF1-202ENST00000540010 RAI1Q7Z5J4 1906 aaPredicted RBP7.94□□□□□ -1.14
TRAF1-202ENST00000540010 C19orf54Q5BKX5 351 aa7.94□□□□□ -1.14
TRAF1-202ENST00000540010 ZNF833PQ6ZTB9 187 aa7.94□□□□□ -1.14
TRAF1-202ENST00000540010 OR5A1Q8NGJ0 315 aa7.94□□□□□ -1.14
TRAF1-202ENST00000540010 CHTOPQ9Y3Y2 248 aaKnown RBP7.94□□□□□ -1.14
TRAF1-202ENST00000540010 IGHV1-24A0A0C4DH33 117 aa7.94□□□□□ -1.14
TRAF1-202ENST00000540010 RNASE1P07998 156 aaKnown RBP7.94□□□□□ -1.14
TRAF1-202ENST00000540010 C8orf49Q96NF6 230 aa7.94□□□□□ -1.14
TRAF1-202ENST00000540010 C14orf178Q8N769 122 aaPredicted RBP7.94□□□□□ -1.14
TRAF1-202ENST00000540010 TRAV2A0A0B4J234 112 aa7.94□□□□□ -1.14
TRAF1-202ENST00000540010 TMEM249Q2WGJ8 235 aa7.94□□□□□ -1.14
TRAF1-202ENST00000540010 GAGE13Q4V321 117 aa7.94□□□□□ -1.14
TRAF1-202ENST00000540010 SIGMAR1Q99720 223 aa7.94□□□□□ -1.14
TRAF1-202ENST00000540010 TNFRSF18Q9Y5U5 241 aa7.94□□□□□ -1.14
TRAF1-202ENST00000540010 NAV3Q8IVL0 2385 aa7.94□□□□□ -1.14
TRAF1-202ENST00000540010 TRAV8-2A0A0B4J237 113 aa7.93□□□□□ -1.14
TRAF1-202ENST00000540010 TRAV21A0A0B4J279 112 aa7.93□□□□□ -1.14
TRAF1-202ENST00000540010 SMIM27A0A1W2PRY6 76 aa7.93□□□□□ -1.14
TRAF1-202ENST00000540010 CIRBPQ14011 172 aaKnown RBP7.93□□□□□ -1.14
TRAF1-202ENST00000540010 LAGE3Q14657 143 aa7.93□□□□□ -1.14
TRAF1-202ENST00000540010 MORN5Q5VZ52 161 aa7.93□□□□□ -1.14
TRAF1-202ENST00000540010 DUX5Q96PT3 197 aa7.93□□□□□ -1.14
TRAF1-202ENST00000540010 SPENQ96T58 3664 aaKnown RBP7.93□□□□□ -1.14
TRAF1-202ENST00000540010 TRAV40A0A0B4J280 105 aa7.93□□□□□ -1.14
TRAF1-202ENST00000540010 HAX1O00165 279 aa7.93□□□□□ -1.14
TRAF1-202ENST00000540010 PPP1R17O96001 155 aa7.93□□□□□ -1.14
TRAF1-202ENST00000540010 PAX8Q06710 450 aa7.93□□□□□ -1.14
TRAF1-202ENST00000540010 OCIAD2Q56VL3 154 aa7.93□□□□□ -1.14
TRAF1-202ENST00000540010 PSMG4Q5JS54 123 aa7.93□□□□□ -1.14
TRAF1-202ENST00000540010 PAPPA-AS1Q5QFB9 102 aa7.93□□□□□ -1.14
TRAF1-202ENST00000540010 VMO1Q7Z5L0 202 aa7.93□□□□□ -1.14
TRAF1-202ENST00000540010 RNF182Q8N6D2 247 aa7.93□□□□□ -1.14
TRAF1-202ENST00000540010 TMEM8BA6NDV4 472 aa7.92□□□□□ -1.14
TRAF1-202ENST00000540010 C17orf77Q96MU5 243 aa7.92□□□□□ -1.14
TRAF1-202ENST00000540010 SHANK2-AS3Q9BTD1 123 aa7.92□□□□□ -1.14
TRAF1-202ENST00000540010 VCX2Q9H322 139 aa7.92□□□□□ -1.14
TRAF1-202ENST00000540010 HIVEP3Q5T1R4 2406 aa7.92□□□□□ -1.14
TRAF1-202ENST00000540010 IGHV4-39P01824 125 aa7.92□□□□□ -1.14
TRAF1-202ENST00000540010 ORMDL2Q53FV1 153 aa7.92□□□□□ -1.14
TRAF1-202ENST00000540010 BRD3OSQ6XYD6 125 aa7.92□□□□□ -1.14
TRAF1-202ENST00000540010 MRPL52Q86TS9 123 aaKnown RBP7.92□□□□□ -1.14
TRAF1-202ENST00000540010 FXYD5Q96DB9 178 aa7.92□□□□□ -1.14
TRAF1-202ENST00000540010 PIMREGQ9BSJ6 248 aa7.92□□□□□ -1.14
TRAF1-202ENST00000540010 KIR2DL5BA0A0G2JN68 375 aa7.92□□□□□ -1.14
TRAF1-202ENST00000540010 KIR2DL5BA0A0G2JPC4 375 aa7.92□□□□□ -1.14
TRAF1-202ENST00000540010 SMAD7O15105 426 aaKnown RBP7.92□□□□□ -1.14
TRAF1-202ENST00000540010 FCN3O75636 299 aa7.92□□□□□ -1.14
TRAF1-202ENST00000540010 KIR2DL5AQ8N109 375 aa7.92□□□□□ -1.14
TRAF1-202ENST00000540010 IGFBPL1Q8WX77 278 aa7.92□□□□□ -1.14
TRAF1-202ENST00000540010 HCFC1P51610 2035 aa7.92□□□□□ -1.14
TRAF1-202ENST00000540010 SIGLEC15Q6ZMC9 328 aa7.92□□□□□ -1.14
TRAF1-202ENST00000540010 TMEM75Q8N9X5 138 aa7.92□□□□□ -1.14
TRAF1-202ENST00000540010 TNFRSF13BO14836 293 aaPredicted RBP7.91□□□□□ -1.14
TRAF1-202ENST00000540010 FAM231DQ6ZW35 169 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms