RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 KANTRA0A1W2PQU2 76 aa10.65□□□□□ -0.7
USB1-203ENST00000539737 ZNF705FA8MVS1 300 aaPredicted RBP10.65□□□□□ -0.7
USB1-203ENST00000539737 INSP01308 110 aa10.65□□□□□ -0.7
USB1-203ENST00000539737 ZNF705DP0CH99 300 aaPredicted RBP10.65□□□□□ -0.7
USB1-203ENST00000539737 ZNF705BP0CI00 300 aaPredicted RBP10.65□□□□□ -0.7
USB1-203ENST00000539737 EMP1P54849 157 aa10.65□□□□□ -0.7
USB1-203ENST00000539737 LYPD1Q8N2G4 141 aa10.65□□□□□ -0.7
USB1-203ENST00000539737 ZNF503Q96F45 646 aa10.65□□□□□ -0.7
USB1-203ENST00000539737 PHYHIPLQ96FC7 376 aa10.65□□□□□ -0.7
USB1-203ENST00000539737 ST6GAL2Q96JF0 529 aa10.65□□□□□ -0.7
USB1-203ENST00000539737 NACAE9PAV3 2078 aa10.65□□□□□ -0.7
USB1-203ENST00000539737 HERC1Q15751 4861 aa10.65□□□□□ -0.7
USB1-203ENST00000539737 BCL2L11O43521 198 aa10.64□□□□□ -0.71
USB1-203ENST00000539737 HBE1P02100 147 aa10.64□□□□□ -0.71
USB1-203ENST00000539737 SPINK13Q1W4C9 94 aa10.64□□□□□ -0.71
USB1-203ENST00000539737 ZNF705AQ6ZN79 300 aaPredicted RBP10.64□□□□□ -0.71
USB1-203ENST00000539737 IGF2BP2-AS1Q96M15 143 aa10.64□□□□□ -0.71
USB1-203ENST00000539737 TMEM208Q9BTX3 173 aa10.64□□□□□ -0.71
USB1-203ENST00000539737 ACTR3CQ9C0K3 210 aaPredicted RBP10.64□□□□□ -0.71
USB1-203ENST00000539737 CYTL1Q9NRR1 136 aa10.64□□□□□ -0.71
USB1-203ENST00000539737 hCG_2014768A0A024R1R8 64 aa10.63□□□□□ -0.71
USB1-203ENST00000539737 PRAC2D3DTV9 90 aa10.63□□□□□ -0.71
USB1-203ENST00000539737 NPIPB6E9PJ23 425 aa10.63□□□□□ -0.71
USB1-203ENST00000539737 M0R2Z0 102 aa10.63□□□□□ -0.71
USB1-203ENST00000539737 M0R3E3 92 aa10.63□□□□□ -0.71
USB1-203ENST00000539737 PFDN1O60925 122 aa10.63□□□□□ -0.71
USB1-203ENST00000539737 STAG3L2P0CL84 134 aa10.63□□□□□ -0.71
USB1-203ENST00000539737 STAG3L3P0CL85 134 aa10.63□□□□□ -0.71
USB1-203ENST00000539737 TSPOP30536 169 aa10.63□□□□□ -0.71
USB1-203ENST00000539737 ICAM4Q14773 271 aa10.63□□□□□ -0.71
USB1-203ENST00000539737 AKR1C8PQ5T2L2 129 aa10.63□□□□□ -0.71
USB1-203ENST00000539737 AKAP14Q86UN6 197 aa10.63□□□□□ -0.71
USB1-203ENST00000539737 EXOC3-AS1Q8N2X6 119 aa10.63□□□□□ -0.71
USB1-203ENST00000539737 ODF3Q96PU9 254 aa10.63□□□□□ -0.71
USB1-203ENST00000539737 NDUFAF3Q9BU61 184 aa10.63□□□□□ -0.71
USB1-203ENST00000539737 DNAH5Q8TE73 4624 aa10.63□□□□□ -0.71
USB1-203ENST00000539737 ARL14EPLP0DKL9 152 aa10.62□□□□□ -0.71
USB1-203ENST00000539737 P0DMU3 169 aa10.62□□□□□ -0.71
USB1-203ENST00000539737 FAM231AP0DMU4 169 aa10.62□□□□□ -0.71
USB1-203ENST00000539737 FAM231CP0DMU5 169 aa10.62□□□□□ -0.71
USB1-203ENST00000539737 CDKN1BP46527 198 aa10.62□□□□□ -0.71
USB1-203ENST00000539737 CSN1S1P47710 185 aa10.62□□□□□ -0.71
USB1-203ENST00000539737 EIF5AP63241 154 aaKnown RBP10.62□□□□□ -0.71
USB1-203ENST00000539737 RAB24Q969Q5 203 aa10.62□□□□□ -0.71
USB1-203ENST00000539737 Q9H3A6 140 aa10.62□□□□□ -0.71
USB1-203ENST00000539737 HMGB3O15347 200 aaKnown RBP10.61□□□□□ -0.71
USB1-203ENST00000539737 EIF3GO75821 320 aaKnown RBP eCLIP10.61□□□□□ -0.71
USB1-203ENST00000539737 HTN3P15516 51 aa10.61□□□□□ -0.71
USB1-203ENST00000539737 LEPP41159 167 aa10.61□□□□□ -0.71
USB1-203ENST00000539737 RANP62826 216 aaKnown RBP10.61□□□□□ -0.71
USB1-203ENST00000539737 RRN3P1Q2M238 152 aa10.61□□□□□ -0.71
USB1-203ENST00000539737 FAM74A1Q5RGS3 127 aa10.61□□□□□ -0.71
USB1-203ENST00000539737 Q6ZR54 194 aa10.61□□□□□ -0.71
USB1-203ENST00000539737 UBE2DNLQ8IWF7 75 aa10.61□□□□□ -0.71
USB1-203ENST00000539737 BAP18Q8IXM2 172 aa10.61□□□□□ -0.71
USB1-203ENST00000539737 ZNF471Q9BX82 626 aaPredicted RBP10.61□□□□□ -0.71
USB1-203ENST00000539737 OTORQ9NRC9 128 aa10.61□□□□□ -0.71
USB1-203ENST00000539737 CTXND1A0A1B0GTU2 59 aa10.6□□□□□ -0.71
USB1-203ENST00000539737 CRXO43186 299 aaPredicted RBP10.6□□□□□ -0.71
USB1-203ENST00000539737 CXorf1O96002 111 aa10.6□□□□□ -0.71
USB1-203ENST00000539737 C1QBP02746 253 aa10.6□□□□□ -0.71
USB1-203ENST00000539737 PRB4P10163 310 aaPredicted RBP10.6□□□□□ -0.71
USB1-203ENST00000539737 TMEM256Q8N2U0 113 aa10.6□□□□□ -0.71
USB1-203ENST00000539737 RXFP4Q8TDU9 374 aa10.6□□□□□ -0.71
USB1-203ENST00000539737 TMEM167BQ9NRX6 74 aa10.6□□□□□ -0.71
USB1-203ENST00000539737 TRAV12-2A0A075B6T6 113 aa10.59□□□□□ -0.71
USB1-203ENST00000539737 LOC102723971A0A1B0GUV8 181 aa10.59□□□□□ -0.71
USB1-203ENST00000539737 SEC11BP0C7V7 166 aa10.59□□□□□ -0.71
USB1-203ENST00000539737 GCHFRP30047 84 aa10.59□□□□□ -0.71
USB1-203ENST00000539737 TNP2Q05952 138 aa10.59□□□□□ -0.71
USB1-203ENST00000539737 LGALS9BQ3B8N2 356 aa10.59□□□□□ -0.71
USB1-203ENST00000539737 TMEM78Q5T7P6 136 aa10.59□□□□□ -0.71
USB1-203ENST00000539737 TMUB2Q71RG4 321 aa10.59□□□□□ -0.71
USB1-203ENST00000539737 C1orf158Q8N1D5 194 aa10.59□□□□□ -0.71
USB1-203ENST00000539737 CMTM2Q8TAZ6 248 aa10.59□□□□□ -0.71
USB1-203ENST00000539737 FAM210BQ96KR6 192 aa10.59□□□□□ -0.71
USB1-203ENST00000539737 HYLS1Q96M11 299 aa10.59□□□□□ -0.71
USB1-203ENST00000539737 LINC00477Q96M19 166 aa10.59□□□□□ -0.71
USB1-203ENST00000539737 C20orf144Q9BQM9 153 aa10.59□□□□□ -0.71
USB1-203ENST00000539737 NIPSNAP3BQ9BS92 247 aa10.59□□□□□ -0.71
USB1-203ENST00000539737 IGKV2-40A0A087WW87 121 aaPredicted RBP10.58□□□□□ -0.72
USB1-203ENST00000539737 RBAKDNA6NC62 111 aa10.58□□□□□ -0.72
USB1-203ENST00000539737 IGKV2D-40P01614 121 aaPredicted RBP10.58□□□□□ -0.72
USB1-203ENST00000539737 SLC25A5P05141 298 aaKnown RBP10.58□□□□□ -0.72
USB1-203ENST00000539737 CT45A10P0DMU9 189 aa10.58□□□□□ -0.72
USB1-203ENST00000539737 TPT1P13693 172 aaKnown RBP10.58□□□□□ -0.72
USB1-203ENST00000539737 C9orf47Q6ZRZ4 202 aa10.58□□□□□ -0.72
USB1-203ENST00000539737 ARL6IP6Q8N6S5 226 aa10.58□□□□□ -0.72
USB1-203ENST00000539737 MAPKAPK5-AS1Q8N8E1 139 aa10.58□□□□□ -0.72
USB1-203ENST00000539737 SUN5Q8TC36 379 aa10.58□□□□□ -0.72
USB1-203ENST00000539737 UMAD1C9J7I0 102 aa10.57□□□□□ -0.72
USB1-203ENST00000539737 DAD1P61803 113 aa10.57□□□□□ -0.72
USB1-203ENST00000539737 ERCC8Q13216 396 aa10.57□□□□□ -0.72
USB1-203ENST00000539737 ZNF726P1Q15940 193 aa10.57□□□□□ -0.72
USB1-203ENST00000539737 FAM222AQ5U5X8 452 aa10.57□□□□□ -0.72
USB1-203ENST00000539737 SSX7Q7RTT5 188 aa10.57□□□□□ -0.72
USB1-203ENST00000539737 IQCF2Q8IXL9 164 aa10.57□□□□□ -0.72
USB1-203ENST00000539737 STOML3Q8TAV4 291 aa10.57□□□□□ -0.72
USB1-203ENST00000539737 DKK2Q9UBU2 259 aa10.57□□□□□ -0.72
USB1-203ENST00000539737 TRBV7-9A0A0J9YWB2 115 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms