RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 ZNF674Q2M3X9 581 aa9.57□□□□□ -0.88
CCDC42-202ENST00000539522 DEFB121Q5J5C9 76 aa9.57□□□□□ -0.88
CCDC42-202ENST00000539522 PSMG4Q5JS54 123 aa9.57□□□□□ -0.88
CCDC42-202ENST00000539522 SBSPONQ8IVN8 264 aa9.57□□□□□ -0.88
CCDC42-202ENST00000539522 EXOC3-AS1Q8N2X6 119 aa9.57□□□□□ -0.88
CCDC42-202ENST00000539522 TVP23CQ96ET8 276 aa9.57□□□□□ -0.88
CCDC42-202ENST00000539522 C16orf92Q96LL3 132 aa9.57□□□□□ -0.88
CCDC42-202ENST00000539522 ZNF331Q9NQX6 463 aaPredicted RBP9.57□□□□□ -0.88
CCDC42-202ENST00000539522 NAT8Q9UHE5 227 aa9.57□□□□□ -0.88
CCDC42-202ENST00000539522 K7EQM0 130 aa9.56□□□□□ -0.88
CCDC42-202ENST00000539522 PEX7O00628 323 aa9.56□□□□□ -0.88
CCDC42-202ENST00000539522 TCRAP04437 139 aa9.56□□□□□ -0.88
CCDC42-202ENST00000539522 GIG44P09565 113 aaPredicted RBP9.56□□□□□ -0.88
CCDC42-202ENST00000539522 ID1P41134 155 aa9.56□□□□□ -0.88
CCDC42-202ENST00000539522 CNN1P51911 297 aaKnown RBP9.56□□□□□ -0.88
CCDC42-202ENST00000539522 SNRPD3P62318 126 aaKnown RBP9.56□□□□□ -0.88
CCDC42-202ENST00000539522 PNRC1Q12796 327 aaPredicted RBP9.56□□□□□ -0.88
CCDC42-202ENST00000539522 C2CD4CQ8TF44 421 aa9.56□□□□□ -0.88
CCDC42-202ENST00000539522 ATG101Q9BSB4 218 aa9.56□□□□□ -0.88
CCDC42-202ENST00000539522 SDF2L1Q9HCN8 221 aa9.56□□□□□ -0.88
CCDC42-202ENST00000539522 KLF12Q9Y4X4 402 aa9.56□□□□□ -0.88
CCDC42-202ENST00000539522 SERTM2A0A1B0GWG4 89 aa9.55□□□□□ -0.88
CCDC42-202ENST00000539522 ZNF705FA8MVS1 300 aaPredicted RBP9.55□□□□□ -0.88
CCDC42-202ENST00000539522 PRAC2D3DTV9 90 aa9.55□□□□□ -0.88
CCDC42-202ENST00000539522 AKR1C3P42330 323 aa9.55□□□□□ -0.88
CCDC42-202ENST00000539522 RPL35P42766 123 aaKnown RBP9.55□□□□□ -0.88
CCDC42-202ENST00000539522 CMC4P56277 68 aaPredicted RBP9.55□□□□□ -0.88
CCDC42-202ENST00000539522 TMEM183BQ1AE95 376 aa9.55□□□□□ -0.88
CCDC42-202ENST00000539522 CLRN3Q8NCR9 226 aa9.55□□□□□ -0.88
CCDC42-202ENST00000539522 MRPL53Q96EL3 112 aaKnown RBP9.55□□□□□ -0.88
CCDC42-202ENST00000539522 LY96Q9Y6Y9 160 aa9.55□□□□□ -0.88
CCDC42-202ENST00000539522 FBLL1A6NHQ2 334 aaKnown RBP9.54□□□□□ -0.88
CCDC42-202ENST00000539522 B4DEV8 164 aa9.54□□□□□ -0.88
CCDC42-202ENST00000539522 C9JCJ5 164 aa9.54□□□□□ -0.88
CCDC42-202ENST00000539522 DIRC3C9JPN6 131 aa9.54□□□□□ -0.88
CCDC42-202ENST00000539522 M0R036 132 aa9.54□□□□□ -0.88
CCDC42-202ENST00000539522 ZNF705DP0CH99 300 aaPredicted RBP9.54□□□□□ -0.88
CCDC42-202ENST00000539522 ZNF705BP0CI00 300 aaPredicted RBP9.54□□□□□ -0.88
CCDC42-202ENST00000539522 TRPT1Q86TN4 253 aaKnown RBP9.54□□□□□ -0.88
CCDC42-202ENST00000539522 ASCL2Q99929 193 aa9.54□□□□□ -0.88
CCDC42-202ENST00000539522 B9D2Q9BPU9 175 aa9.54□□□□□ -0.88
CCDC42-202ENST00000539522 DERL1Q9BUN8 251 aa9.54□□□□□ -0.88
CCDC42-202ENST00000539522 TRBV6-1A0A0K0K1D8 114 aa9.53□□□□□ -0.88
CCDC42-202ENST00000539522 A8MTW9 85 aa9.53□□□□□ -0.88
CCDC42-202ENST00000539522 H3BMM0 161 aa9.53□□□□□ -0.88
CCDC42-202ENST00000539522 M0R3E3 92 aa9.53□□□□□ -0.88
CCDC42-202ENST00000539522 GNG4P50150 75 aa9.53□□□□□ -0.88
CCDC42-202ENST00000539522 UBE2G1P62253 170 aa9.53□□□□□ -0.88
CCDC42-202ENST00000539522 GNG5P63218 68 aa9.53□□□□□ -0.88
CCDC42-202ENST00000539522 PSG3Q16557 428 aa9.53□□□□□ -0.88
CCDC42-202ENST00000539522 FMC1Q96HJ9 113 aa9.53□□□□□ -0.88
CCDC42-202ENST00000539522 LINC00479Q96M42 142 aa9.53□□□□□ -0.88
CCDC42-202ENST00000539522 SAV1Q9H4B6 383 aaPredicted RBP9.53□□□□□ -0.88
CCDC42-202ENST00000539522 A0A0J9YX75 114 aa9.52□□□□□ -0.89
CCDC42-202ENST00000539522 HLA-DRB4P13762 266 aa9.52□□□□□ -0.89
CCDC42-202ENST00000539522 RPL35AP18077 110 aaKnown RBP9.52□□□□□ -0.89
CCDC42-202ENST00000539522 RHEBQ15382 184 aa9.52□□□□□ -0.89
CCDC42-202ENST00000539522 ACTL10Q5JWF8 245 aa9.52□□□□□ -0.89
CCDC42-202ENST00000539522 AMTNQ6UX39 209 aa9.52□□□□□ -0.89
CCDC42-202ENST00000539522 GOLT1AQ6ZVE7 132 aa9.52□□□□□ -0.89
CCDC42-202ENST00000539522 BAGE2Q86Y30 109 aa9.52□□□□□ -0.89
CCDC42-202ENST00000539522 OCC1Q8TAD7 63 aa9.52□□□□□ -0.89
CCDC42-202ENST00000539522 RPH3ALQ9UNE2 315 aa9.52□□□□□ -0.89
CCDC42-202ENST00000539522 HLA-DRB4X5D2U9 266 aa9.52□□□□□ -0.89
CCDC42-202ENST00000539522 DNAH7Q8WXX0 4024 aa9.52□□□□□ -0.89
CCDC42-202ENST00000539522 TRAV34A0A0B4J273 112 aa9.51□□□□□ -0.89
CCDC42-202ENST00000539522 C7orf77A4D0Y5 90 aa9.51□□□□□ -0.89
CCDC42-202ENST00000539522 RBAKDNA6NC62 111 aa9.51□□□□□ -0.89
CCDC42-202ENST00000539522 RPL23P62829 140 aaKnown RBP9.51□□□□□ -0.89
CCDC42-202ENST00000539522 TMEM75Q8N9X5 138 aa9.51□□□□□ -0.89
CCDC42-202ENST00000539522 ZNF738Q8NE65 137 aa9.51□□□□□ -0.89
CCDC42-202ENST00000539522 SMIM12Q96EX1 92 aa9.51□□□□□ -0.89
CCDC42-202ENST00000539522 TM2D3Q9BRN9 247 aa9.51□□□□□ -0.89
CCDC42-202ENST00000539522 TUBA4BQ9H853 241 aa9.51□□□□□ -0.89
CCDC42-202ENST00000539522 RETNQ9HD89 108 aa9.51□□□□□ -0.89
CCDC42-202ENST00000539522 ZFP30Q9Y2G7 519 aa9.51□□□□□ -0.89
CCDC42-202ENST00000539522 TRBV20OR9-2A0A075B6H5 130 aa9.5□□□□□ -0.89
CCDC42-202ENST00000539522 LOC102724200A0A096LPH7 203 aaPredicted RBP9.5□□□□□ -0.89
CCDC42-202ENST00000539522 MT-ND4LP03901 98 aa9.5□□□□□ -0.89
CCDC42-202ENST00000539522 ADIRFQ15847 76 aa9.5□□□□□ -0.89
CCDC42-202ENST00000539522 CENPWQ5EE01 88 aa9.5□□□□□ -0.89
CCDC42-202ENST00000539522 ATRAIDQ6UW56 229 aa9.5□□□□□ -0.89
CCDC42-202ENST00000539522 FOXI2Q6ZQN5 318 aa9.5□□□□□ -0.89
CCDC42-202ENST00000539522 LINC01551Q86U37 167 aa9.5□□□□□ -0.89
CCDC42-202ENST00000539522 IGF2BP2-AS1Q96M15 143 aa9.5□□□□□ -0.89
CCDC42-202ENST00000539522 RPS10P5Q9NQ39 176 aa9.5□□□□□ -0.89
CCDC42-202ENST00000539522 BIN3Q9NQY0 253 aa9.5□□□□□ -0.89
CCDC42-202ENST00000539522 A0A087WWC5 75 aa9.49□□□□□ -0.89
CCDC42-202ENST00000539522 GCGP01275 180 aa9.49□□□□□ -0.89
CCDC42-202ENST00000539522 LTAP01374 205 aa9.49□□□□□ -0.89
CCDC42-202ENST00000539522 IGLV2-11P01706 119 aa9.49□□□□□ -0.89
CCDC42-202ENST00000539522 FLI1Q01543 452 aaPredicted RBP9.49□□□□□ -0.89
CCDC42-202ENST00000539522 SAPCD1Q5SSQ6 148 aa9.49□□□□□ -0.89
CCDC42-202ENST00000539522 CSNK1G2-AS1Q8NCQ2 148 aa9.49□□□□□ -0.89
CCDC42-202ENST00000539522 CTDSP1Q9GZU7 261 aa9.49□□□□□ -0.89
CCDC42-202ENST00000539522 PSG8Q9UQ74 426 aa9.49□□□□□ -0.89
CCDC42-202ENST00000539522 IGKV3-20P01619 116 aa9.48□□□□□ -0.89
CCDC42-202ENST00000539522 IGLV2-8P01709 118 aa9.48□□□□□ -0.89
CCDC42-202ENST00000539522 PRNTQ86SH4 94 aa9.48□□□□□ -0.89
CCDC42-202ENST00000539522 TMEM183AQ8IXX5 376 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms