RNA–Protein interactions for RNA: ENST00000539041.5

SMPDL3A-203, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2 BASIC

Gene SMPDL3A, Length 1,755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-203ENST00000539041 POLQO75417 2590 aa15.76■□□□□ 0.11
SMPDL3A-203ENST00000539041 ARMS2P0C7Q2 107 aa15.75■□□□□ 0.11
SMPDL3A-203ENST00000539041 ZNF80P51504 273 aaPredicted RBP15.75■□□□□ 0.11
SMPDL3A-203ENST00000539041 PTPN13Q12923 2485 aa15.75■□□□□ 0.11
SMPDL3A-203ENST00000539041 A0A1B0GW15 77 aa15.75■□□□□ 0.11
SMPDL3A-203ENST00000539041 RPS20P60866 119 aaKnown RBP15.75■□□□□ 0.11
SMPDL3A-203ENST00000539041 SRSF2Q01130 221 aaKnown RBP15.75■□□□□ 0.11
SMPDL3A-203ENST00000539041 IQCJQ1A5X6 159 aa15.75■□□□□ 0.11
SMPDL3A-203ENST00000539041 GATD1Q8NB37 220 aa15.75■□□□□ 0.11
SMPDL3A-203ENST00000539041 BORCS7Q96B45 105 aa15.75■□□□□ 0.11
SMPDL3A-203ENST00000539041 PLA2G2AP14555 144 aa15.74■□□□□ 0.11
SMPDL3A-203ENST00000539041 USP9YO00507 2555 aaPredicted RBP15.73■□□□□ 0.11
SMPDL3A-203ENST00000539041 TMSB15BA0A087X1C1 80 aa15.73■□□□□ 0.11
SMPDL3A-203ENST00000539041 IGHV7-4-1A0A0J9YVY3 117 aa15.73■□□□□ 0.11
SMPDL3A-203ENST00000539041 AGPAT4-IT1Q9H0P7 198 aa15.73■□□□□ 0.11
SMPDL3A-203ENST00000539041 J3QKU1 62 aa15.72■□□□□ 0.11
SMPDL3A-203ENST00000539041 HOXA3O43365 443 aaPredicted RBP15.72■□□□□ 0.11
SMPDL3A-203ENST00000539041 GPX1P07203 203 aa15.72■□□□□ 0.11
SMPDL3A-203ENST00000539041 TMEM78Q5T7P6 136 aa15.72■□□□□ 0.11
SMPDL3A-203ENST00000539041 SIGLECL1Q8N7X8 197 aa15.72■□□□□ 0.11
SMPDL3A-203ENST00000539041 DOPEY2Q9Y3R5 2298 aa15.72■□□□□ 0.11
SMPDL3A-203ENST00000539041 LOC102724200A0A096LPH7 203 aaPredicted RBP15.72■□□□□ 0.11
SMPDL3A-203ENST00000539041 FABP5P3A8MUU1 101 aa15.72■□□□□ 0.11
SMPDL3A-203ENST00000539041 PRR31Q5SQ13 230 aa15.72■□□□□ 0.11
SMPDL3A-203ENST00000539041 C9orf47Q6ZRZ4 202 aa15.72■□□□□ 0.11
SMPDL3A-203ENST00000539041 IL17RELQ6ZVW7 336 aa15.72■□□□□ 0.11
SMPDL3A-203ENST00000539041 Q6ZWC4 215 aa15.72■□□□□ 0.11
SMPDL3A-203ENST00000539041 TPPP3Q9BW30 176 aa15.72■□□□□ 0.11
SMPDL3A-203ENST00000539041 ZNF702PQ9H963 129 aa15.72■□□□□ 0.11
SMPDL3A-203ENST00000539041 AMTP48728 403 aa15.71■□□□□ 0.11
SMPDL3A-203ENST00000539041 ZNF138P52744 262 aa15.71■□□□□ 0.11
SMPDL3A-203ENST00000539041 FAM106AQ4KMX7 169 aa15.71■□□□□ 0.11
SMPDL3A-203ENST00000539041 C10orf99Q6UWK7 81 aa15.71■□□□□ 0.11
SMPDL3A-203ENST00000539041 GPHB5Q86YW7 130 aa15.71■□□□□ 0.11
SMPDL3A-203ENST00000539041 DAZ1Q9NQZ3 744 aaKnown RBP15.71■□□□□ 0.11
SMPDL3A-203ENST00000539041 LINC00587B1AMM8 73 aa15.7■□□□□ 0.1
SMPDL3A-203ENST00000539041 K7EMT4 169 aa15.7■□□□□ 0.1
SMPDL3A-203ENST00000539041 ZNF324O75467 553 aaPredicted RBP15.7■□□□□ 0.1
SMPDL3A-203ENST00000539041 SCGB1D1O95968 90 aa15.7■□□□□ 0.1
SMPDL3A-203ENST00000539041 TM4SF20Q53R12 229 aa15.7■□□□□ 0.1
SMPDL3A-203ENST00000539041 LYZL1Q6UWQ5 148 aa15.7■□□□□ 0.1
SMPDL3A-203ENST00000539041 PPP1R14DQ9NXH3 145 aa15.7■□□□□ 0.1
SMPDL3A-203ENST00000539041 MAP1AP78559 2803 aaPredicted RBP15.7■□□□□ 0.1
SMPDL3A-203ENST00000539041 SOCS3O14543 225 aa15.7■□□□□ 0.1
SMPDL3A-203ENST00000539041 PMCHP20382 165 aa15.7■□□□□ 0.1
SMPDL3A-203ENST00000539041 C20orf173Q96LM9 149 aa15.7■□□□□ 0.1
SMPDL3A-203ENST00000539041 RHPN1-AS1Q9BWJ2 59 aa15.7■□□□□ 0.1
SMPDL3A-203ENST00000539041 NAGKQ9UJ70 344 aa15.7■□□□□ 0.1
SMPDL3A-203ENST00000539041 HIST2H2BCQ6DN03 193 aa15.69■□□□□ 0.1
SMPDL3A-203ENST00000539041 ZNF738Q8NE65 137 aa15.69■□□□□ 0.1
SMPDL3A-203ENST00000539041 SMPXQ9UHP9 88 aa15.69■□□□□ 0.1
SMPDL3A-203ENST00000539041 PKIAP61925 76 aa15.68■□□□□ 0.1
SMPDL3A-203ENST00000539041 FOXE3Q13461 319 aa15.68■□□□□ 0.1
SMPDL3A-203ENST00000539041 NRN1Q9NPD7 142 aa15.68■□□□□ 0.1
SMPDL3A-203ENST00000539041 CSMD2Q7Z408 3487 aa15.68■□□□□ 0.1
SMPDL3A-203ENST00000539041 ORM1P02763 201 aa15.67■□□□□ 0.1
SMPDL3A-203ENST00000539041 RPLP1P05386 114 aaKnown RBP15.67■□□□□ 0.1
SMPDL3A-203ENST00000539041 ELANEP08246 267 aa15.67■□□□□ 0.1
SMPDL3A-203ENST00000539041 IGLC6P0CF74 106 aa15.67■□□□□ 0.1
SMPDL3A-203ENST00000539041 CTRLP40313 264 aa15.67■□□□□ 0.1
SMPDL3A-203ENST00000539041 HIST1H1AQ02539 215 aaPredicted RBP15.67■□□□□ 0.1
SMPDL3A-203ENST00000539041 LINC01559Q495D7 138 aa15.67■□□□□ 0.1
SMPDL3A-203ENST00000539041 ZNF493Q6ZR52 646 aa15.67■□□□□ 0.1
SMPDL3A-203ENST00000539041 FER1L6-AS1Q8NA97 138 aa15.67■□□□□ 0.1
SMPDL3A-203ENST00000539041 PSMG3-AS1Q96PY0 264 aa15.67■□□□□ 0.1
SMPDL3A-203ENST00000539041 ABCA12Q86UK0 2595 aa15.67■□□□□ 0.1
SMPDL3A-203ENST00000539041 NAV2Q8IVL1 2488 aa15.67■□□□□ 0.1
SMPDL3A-203ENST00000539041 WFDC11Q8NEX6 87 aa15.67■□□□□ 0.1
SMPDL3A-203ENST00000539041 UFC1Q9Y3C8 167 aa15.67■□□□□ 0.1
SMPDL3A-203ENST00000539041 OVOL1O14753 267 aa15.66■□□□□ 0.1
SMPDL3A-203ENST00000539041 HSBP1O75506 76 aa15.66■□□□□ 0.1
SMPDL3A-203ENST00000539041 RPL11P62913 178 aaKnown RBP15.66■□□□□ 0.1
SMPDL3A-203ENST00000539041 RNASEKQ6P5S7 137 aaKnown RBP15.66■□□□□ 0.1
SMPDL3A-203ENST00000539041 TEX29Q8N6K0 151 aa15.66■□□□□ 0.1
SMPDL3A-203ENST00000539041 MYOZ3Q8TDC0 251 aa15.66■□□□□ 0.1
SMPDL3A-203ENST00000539041 LENEPQ9Y5L5 61 aa15.66■□□□□ 0.1
SMPDL3A-203ENST00000539041 TSTD3H0UI37 97 aa15.65■□□□□ 0.1
SMPDL3A-203ENST00000539041 CENPEQ02224 2701 aa15.65■□□□□ 0.1
SMPDL3A-203ENST00000539041 KMT2BQ9UMN6 2715 aaPredicted RBP15.65■□□□□ 0.1
SMPDL3A-203ENST00000539041 LGALS1P09382 135 aaKnown RBP15.64■□□□□ 0.1
SMPDL3A-203ENST00000539041 NTF3P20783 257 aa15.64■□□□□ 0.1
SMPDL3A-203ENST00000539041 NIT1Q86X76 327 aa15.64■□□□□ 0.1
SMPDL3A-203ENST00000539041 ZNF575Q86XF7 245 aa15.64■□□□□ 0.1
SMPDL3A-203ENST00000539041 FAM19A2Q8N3H0 131 aa15.64■□□□□ 0.1
SMPDL3A-203ENST00000539041 PRO1933Q9H354 126 aa15.64■□□□□ 0.1
SMPDL3A-203ENST00000539041 TMEM213A2RRL7 107 aa15.64■□□□□ 0.09
SMPDL3A-203ENST00000539041 ZNF705DP0CH99 300 aaPredicted RBP15.64■□□□□ 0.09
SMPDL3A-203ENST00000539041 ZNF705BP0CI00 300 aaPredicted RBP15.64■□□□□ 0.09
SMPDL3A-203ENST00000539041 CD33P20138 364 aa15.64■□□□□ 0.09
SMPDL3A-203ENST00000539041 OR10J6PQ8NGY7 276 aa15.64■□□□□ 0.09
SMPDL3A-203ENST00000539041 URB1-AS1Q96HZ7 61 aa15.64■□□□□ 0.09
SMPDL3A-203ENST00000539041 LINC00477Q96M19 166 aa15.64■□□□□ 0.09
SMPDL3A-203ENST00000539041 RNF114Q9Y508 228 aa15.63■□□□□ 0.09
SMPDL3A-203ENST00000539041 EDN2P20800 178 aa15.62■□□□□ 0.09
SMPDL3A-203ENST00000539041 Q8N2B8 174 aa15.62■□□□□ 0.09
SMPDL3A-203ENST00000539041 ZNF664Q8N3J9 261 aa15.62■□□□□ 0.09
SMPDL3A-203ENST00000539041 RNF152Q8N8N0 203 aa15.62■□□□□ 0.09
SMPDL3A-203ENST00000539041 APCP25054 2843 aa15.62■□□□□ 0.09
SMPDL3A-203ENST00000539041 ZANQ9Y493 2812 aa15.62■□□□□ 0.09
SMPDL3A-203ENST00000539041 KRTDAPP60985 99 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms