RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 NHLRC2Q8NBF2 726 aa10.54□□□□□ -0.72
CD4-208ENST00000538827 OR8A1Q8NGG7 326 aa10.54□□□□□ -0.72
CD4-208ENST00000538827 VGLL1Q99990 258 aa10.54□□□□□ -0.72
CD4-208ENST00000538827 PSG8Q9UQ74 426 aa10.54□□□□□ -0.72
CD4-208ENST00000538827 PGPEP1LA6NFU8 196 aa10.53□□□□□ -0.72
CD4-208ENST00000538827 KRBOX1C9JBD0 128 aa10.53□□□□□ -0.72
CD4-208ENST00000538827 S100A9P06702 114 aaKnown RBP10.53□□□□□ -0.72
CD4-208ENST00000538827 ZNF124Q15973 351 aa10.53□□□□□ -0.72
CD4-208ENST00000538827 ODF3L2Q3SX64 289 aa10.53□□□□□ -0.72
CD4-208ENST00000538827 FAM74A3Q4VXF1 159 aa10.53□□□□□ -0.72
CD4-208ENST00000538827 APRG1Q8IVJ8 170 aa10.53□□□□□ -0.72
CD4-208ENST00000538827 ARL6IP6Q8N6S5 226 aa10.53□□□□□ -0.72
CD4-208ENST00000538827 NIPSNAP3BQ9BS92 247 aa10.53□□□□□ -0.72
CD4-208ENST00000538827 SEC11CQ9BY50 192 aa10.53□□□□□ -0.72
CD4-208ENST00000538827 RBAKDNA6NC62 111 aa10.52□□□□□ -0.73
CD4-208ENST00000538827 IGKV3-20P01619 116 aa10.52□□□□□ -0.73
CD4-208ENST00000538827 CD7P09564 240 aa10.52□□□□□ -0.73
CD4-208ENST00000538827 MGST1P10620 155 aaKnown RBP10.52□□□□□ -0.73
CD4-208ENST00000538827 TAS2R60P59551 318 aa10.52□□□□□ -0.73
CD4-208ENST00000538827 ADIRFQ15847 76 aa10.52□□□□□ -0.73
CD4-208ENST00000538827 BEAN1Q3B7T3 259 aa10.52□□□□□ -0.73
CD4-208ENST00000538827 ACTL10Q5JWF8 245 aa10.52□□□□□ -0.73
CD4-208ENST00000538827 GDF5OSQ5U4N7 250 aa10.52□□□□□ -0.73
CD4-208ENST00000538827 FOXI2Q6ZQN5 318 aa10.52□□□□□ -0.73
CD4-208ENST00000538827 GTSCR1Q86UQ5 136 aa10.52□□□□□ -0.73
CD4-208ENST00000538827 OR4B1Q8NGF8 309 aa10.52□□□□□ -0.73
CD4-208ENST00000538827 IGF2BP2-AS1Q96M15 143 aa10.52□□□□□ -0.73
CD4-208ENST00000538827 NDFIP1Q9BT67 221 aa10.52□□□□□ -0.73
CD4-208ENST00000538827 PPP1R14DQ9NXH3 145 aa10.52□□□□□ -0.73
CD4-208ENST00000538827 NAT8Q9UHE5 227 aa10.52□□□□□ -0.73
CD4-208ENST00000538827 A0A0J9YX75 114 aa10.51□□□□□ -0.73
CD4-208ENST00000538827 C9JCJ5 164 aa10.51□□□□□ -0.73
CD4-208ENST00000538827 NPIPB6E9PJ23 425 aa10.51□□□□□ -0.73
CD4-208ENST00000538827 DUSP14O95147 198 aaKnown RBP10.51□□□□□ -0.73
CD4-208ENST00000538827 APOC3P02656 99 aa10.51□□□□□ -0.73
CD4-208ENST00000538827 OXLD1Q5BKU9 147 aa10.51□□□□□ -0.73
CD4-208ENST00000538827 BAGE2Q86Y30 109 aa10.51□□□□□ -0.73
CD4-208ENST00000538827 WFDC10AQ9H1F0 79 aa10.51□□□□□ -0.73
CD4-208ENST00000538827 SAV1Q9H4B6 383 aaPredicted RBP10.51□□□□□ -0.73
CD4-208ENST00000538827 AURKAIP1Q9NWT8 199 aaPredicted RBP10.51□□□□□ -0.73
CD4-208ENST00000538827 TRBV20OR9-2A0A075B6H5 130 aa10.5□□□□□ -0.73
CD4-208ENST00000538827 FBLL1A6NHQ2 334 aaKnown RBP10.5□□□□□ -0.73
CD4-208ENST00000538827 J3KRW8 73 aa10.5□□□□□ -0.73
CD4-208ENST00000538827 M0R036 132 aa10.5□□□□□ -0.73
CD4-208ENST00000538827 IGLV2-11P01706 119 aa10.5□□□□□ -0.73
CD4-208ENST00000538827 ZNF138P52744 262 aa10.5□□□□□ -0.73
CD4-208ENST00000538827 CMC4P56277 68 aaPredicted RBP10.5□□□□□ -0.73
CD4-208ENST00000538827 TMEM241Q24JQ0 296 aa10.5□□□□□ -0.73
CD4-208ENST00000538827 C9orf47Q6ZRZ4 202 aa10.5□□□□□ -0.73
CD4-208ENST00000538827 TVP23CQ96ET8 276 aa10.5□□□□□ -0.73
CD4-208ENST00000538827 C8orf49Q96NF6 230 aa10.5□□□□□ -0.73
CD4-208ENST00000538827 AGPAT4-IT1Q9H0P7 198 aa10.5□□□□□ -0.73
CD4-208ENST00000538827 CARHSP1Q9Y2V2 147 aaKnown RBP10.5□□□□□ -0.73
CD4-208ENST00000538827 KLF12Q9Y4X4 402 aa10.5□□□□□ -0.73
CD4-208ENST00000538827 TRBV6-1A0A0K0K1D8 114 aa10.49□□□□□ -0.73
CD4-208ENST00000538827 LTAP01374 205 aa10.49□□□□□ -0.73
CD4-208ENST00000538827 HLA-DRB4P13762 266 aa10.49□□□□□ -0.73
CD4-208ENST00000538827 PRR27Q6MZM9 219 aa10.49□□□□□ -0.73
CD4-208ENST00000538827 PRR25Q96S07 402 aa10.49□□□□□ -0.73
CD4-208ENST00000538827 HLA-DRB4X5D2U9 266 aa10.49□□□□□ -0.73
CD4-208ENST00000538827 AGRNO00468 2067 aa10.49□□□□□ -0.73
CD4-208ENST00000538827 SORL1Q92673 2214 aa10.49□□□□□ -0.73
CD4-208ENST00000538827 S100A1P23297 94 aa10.48□□□□□ -0.73
CD4-208ENST00000538827 RPL23P62829 140 aaKnown RBP10.48□□□□□ -0.73
CD4-208ENST00000538827 STHQ8IWL8 128 aa10.48□□□□□ -0.73
CD4-208ENST00000538827 LINC00477Q96M19 166 aa10.48□□□□□ -0.73
CD4-208ENST00000538827 SDF2L1Q9HCN8 221 aa10.48□□□□□ -0.73
CD4-208ENST00000538827 ZNF492Q9P255 531 aa10.48□□□□□ -0.73
CD4-208ENST00000538827 G3V4G9 280 aa10.47□□□□□ -0.73
CD4-208ENST00000538827 CT45A10P0DMU9 189 aa10.47□□□□□ -0.73
CD4-208ENST00000538827 LEPP41159 167 aa10.47□□□□□ -0.73
CD4-208ENST00000538827 FXYD7P58549 80 aa10.47□□□□□ -0.73
CD4-208ENST00000538827 OR5I1Q13606 314 aa10.47□□□□□ -0.73
CD4-208ENST00000538827 SAPCD1Q5SSQ6 148 aa10.47□□□□□ -0.73
CD4-208ENST00000538827 C10orf91Q5T1B1 145 aa10.47□□□□□ -0.73
CD4-208ENST00000538827 LINC01551Q86U37 167 aa10.47□□□□□ -0.73
CD4-208ENST00000538827 OCC1Q8TAD7 63 aa10.47□□□□□ -0.73
CD4-208ENST00000538827 ZFP30Q9Y2G7 519 aa10.47□□□□□ -0.73
CD4-208ENST00000538827 NOTCH3Q9UM47 2321 aa10.46□□□□□ -0.73
CD4-208ENST00000538827 H3BMM0 161 aa10.46□□□□□ -0.73
CD4-208ENST00000538827 K7EN84 100 aa10.46□□□□□ -0.73
CD4-208ENST00000538827 IGLV2-8P01709 118 aa10.46□□□□□ -0.73
CD4-208ENST00000538827 PNRC1Q12796 327 aaPredicted RBP10.46□□□□□ -0.73
CD4-208ENST00000538827 SMUG1Q53HV7 270 aa10.46□□□□□ -0.73
CD4-208ENST00000538827 TMEM183AQ8IXX5 376 aa10.46□□□□□ -0.73
CD4-208ENST00000538827 SVBPQ8N300 66 aa10.46□□□□□ -0.73
CD4-208ENST00000538827 DEFB125Q8N687 156 aa10.46□□□□□ -0.73
CD4-208ENST00000538827 ZC2HC1AQ96GY0 325 aa10.46□□□□□ -0.73
CD4-208ENST00000538827 LY96Q9Y6Y9 160 aa10.46□□□□□ -0.73
CD4-208ENST00000538827 RBMY1BA6NDE4 496 aaKnown RBP10.45□□□□□ -0.74
CD4-208ENST00000538827 RBMY1EA6NEQ0 496 aaKnown RBP10.45□□□□□ -0.74
CD4-208ENST00000538827 M0R2Z0 102 aa10.45□□□□□ -0.74
CD4-208ENST00000538827 GCGP01275 180 aa10.45□□□□□ -0.74
CD4-208ENST00000538827 RBMY1DP0C7P1 496 aaKnown RBP10.45□□□□□ -0.74
CD4-208ENST00000538827 RPL35AP18077 110 aaKnown RBP10.45□□□□□ -0.74
CD4-208ENST00000538827 SPINK13Q1W4C9 94 aa10.45□□□□□ -0.74
CD4-208ENST00000538827 CLRN3Q8NCR9 226 aa10.45□□□□□ -0.74
CD4-208ENST00000538827 SMIM12Q96EX1 92 aa10.45□□□□□ -0.74
CD4-208ENST00000538827 FAM110AQ9BQ89 295 aa10.45□□□□□ -0.74
CD4-208ENST00000538827 SRD5A3Q9H8P0 318 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms