RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 F6UB75 175 aa10.76□□□□□ -0.69
ACTN1-205ENST00000538545 NDUFA4O00483 81 aa10.76□□□□□ -0.69
ACTN1-205ENST00000538545 WFDC3Q8IUB2 231 aa10.76□□□□□ -0.69
ACTN1-205ENST00000538545 PRR25Q96S07 402 aa10.76□□□□□ -0.69
ACTN1-205ENST00000538545 HIST1H2BLQ99880 126 aa10.76□□□□□ -0.69
ACTN1-205ENST00000538545 RHPN1-AS1Q9BWJ2 59 aa10.76□□□□□ -0.69
ACTN1-205ENST00000538545 ESM1Q9NQ30 184 aa10.76□□□□□ -0.69
ACTN1-205ENST00000538545 A0A0G2JLM5 398 aa10.75□□□□□ -0.69
ACTN1-205ENST00000538545 C16orf54Q6UWD8 224 aa10.75□□□□□ -0.69
ACTN1-205ENST00000538545 C16orf92Q96LL3 132 aa10.75□□□□□ -0.69
ACTN1-205ENST00000538545 YAE1D1Q9NRH1 226 aa10.75□□□□□ -0.69
ACTN1-205ENST00000538545 H3BUA1 57 aa10.75□□□□□ -0.69
ACTN1-205ENST00000538545 CD33P20138 364 aa10.75□□□□□ -0.69
ACTN1-205ENST00000538545 S100A2P29034 98 aa10.75□□□□□ -0.69
ACTN1-205ENST00000538545 TMEM190Q8WZ59 177 aa10.75□□□□□ -0.69
ACTN1-205ENST00000538545 S100A9P06702 114 aaKnown RBP10.74□□□□□ -0.69
ACTN1-205ENST00000538545 TFPI2P48307 235 aa10.74□□□□□ -0.69
ACTN1-205ENST00000538545 PYY3Q5JQD4 70 aa10.74□□□□□ -0.69
ACTN1-205ENST00000538545 WFDC12Q8WWY7 111 aa10.74□□□□□ -0.69
ACTN1-205ENST00000538545 NOTCH3Q9UM47 2321 aa10.74□□□□□ -0.69
ACTN1-205ENST00000538545 IGHV4OR15-8A0A075B7B6 117 aa10.74□□□□□ -0.69
ACTN1-205ENST00000538545 A0A087WW49 117 aa10.74□□□□□ -0.69
ACTN1-205ENST00000538545 SYNJ2BPP57105 145 aa10.74□□□□□ -0.69
ACTN1-205ENST00000538545 LINC00310P59036 64 aa10.74□□□□□ -0.69
ACTN1-205ENST00000538545 KHDC1LQ5JSQ8 128 aa10.74□□□□□ -0.69
ACTN1-205ENST00000538545 AGPAT4-IT1Q9H0P7 198 aa10.74□□□□□ -0.69
ACTN1-205ENST00000538545 ZFP30Q9Y2G7 519 aa10.74□□□□□ -0.69
ACTN1-205ENST00000538545 SH2D1AO60880 128 aa10.73□□□□□ -0.69
ACTN1-205ENST00000538545 AMBPP02760 352 aa10.73□□□□□ -0.69
ACTN1-205ENST00000538545 IQCJQ1A5X6 159 aa10.73□□□□□ -0.69
ACTN1-205ENST00000538545 ZNF492Q9P255 531 aa10.73□□□□□ -0.69
ACTN1-205ENST00000538545 A8MWL6 223 aa10.73□□□□□ -0.69
ACTN1-205ENST00000538545 SRIP30626 198 aa10.73□□□□□ -0.69
ACTN1-205ENST00000538545 SRSF2Q01130 221 aaKnown RBP10.73□□□□□ -0.69
ACTN1-205ENST00000538545 PRDM13Q9H4Q3 707 aa10.73□□□□□ -0.69
ACTN1-205ENST00000538545 A0A087X0K7 114 aa10.72□□□□□ -0.69
ACTN1-205ENST00000538545 NPIPB6E9PJ23 425 aa10.72□□□□□ -0.69
ACTN1-205ENST00000538545 ARMS2P0C7Q2 107 aa10.72□□□□□ -0.69
ACTN1-205ENST00000538545 FOXA3P55318 350 aaPredicted RBP10.72□□□□□ -0.69
ACTN1-205ENST00000538545 RCHY1Q96PM5 261 aa10.72□□□□□ -0.69
ACTN1-205ENST00000538545 GNB1LQ9BYB4 327 aa10.72□□□□□ -0.69
ACTN1-205ENST00000538545 CT45A10P0DMU9 189 aa10.72□□□□□ -0.69
ACTN1-205ENST00000538545 CRISP2P16562 243 aa10.72□□□□□ -0.69
ACTN1-205ENST00000538545 KIR3DS1Q14943 382 aa10.72□□□□□ -0.69
ACTN1-205ENST00000538545 C1orf194Q5T5A4 169 aa10.72□□□□□ -0.69
ACTN1-205ENST00000538545 SMIM12Q96EX1 92 aa10.72□□□□□ -0.69
ACTN1-205ENST00000538545 PACRGQ96M98 296 aaPredicted RBP10.72□□□□□ -0.69
ACTN1-205ENST00000538545 HIVEP1P15822 2718 aa10.72□□□□□ -0.69
ACTN1-205ENST00000538545 TRAV9-1A0A075B6T8 112 aa10.71□□□□□ -0.69
ACTN1-205ENST00000538545 DNAJC9-AS1A6NH13 148 aa10.71□□□□□ -0.69
ACTN1-205ENST00000538545 WIPF2Q8TF74 440 aaPredicted RBP10.71□□□□□ -0.69
ACTN1-205ENST00000538545 DAZ1Q9NQZ3 744 aaKnown RBP10.71□□□□□ -0.69
ACTN1-205ENST00000538545 IGHV7-4-1A0A0J9YVY3 117 aa10.71□□□□□ -0.69
ACTN1-205ENST00000538545 SERF1AO75920 110 aa10.71□□□□□ -0.69
ACTN1-205ENST00000538545 TCTEX1D4Q5JR98 221 aa10.71□□□□□ -0.69
ACTN1-205ENST00000538545 KLHDC1Q8N7A1 406 aa10.71□□□□□ -0.69
ACTN1-205ENST00000538545 ZNF738Q8NE65 137 aa10.71□□□□□ -0.69
ACTN1-205ENST00000538545 NIT2Q9NQR4 276 aa10.71□□□□□ -0.69
ACTN1-205ENST00000538545 JMJD1CQ15652 2540 aa10.71□□□□□ -0.7
ACTN1-205ENST00000538545 CTAG1AP78358 180 aa10.71□□□□□ -0.7
ACTN1-205ENST00000538545 ZNF575Q86XF7 245 aa10.71□□□□□ -0.7
ACTN1-205ENST00000538545 M0QZ24 198 aa10.7□□□□□ -0.7
ACTN1-205ENST00000538545 SPRY2O43597 315 aa10.7□□□□□ -0.7
ACTN1-205ENST00000538545 ZNF253O75346 499 aa10.7□□□□□ -0.7
ACTN1-205ENST00000538545 BRI3O95415 125 aa10.7□□□□□ -0.7
ACTN1-205ENST00000538545 APCSP02743 223 aa10.7□□□□□ -0.7
ACTN1-205ENST00000538545 SLURP1P55000 103 aa10.7□□□□□ -0.7
ACTN1-205ENST00000538545 SLC50A1Q9BRV3 221 aa10.7□□□□□ -0.7
ACTN1-205ENST00000538545 TMEM213A2RRL7 107 aa10.7□□□□□ -0.7
ACTN1-205ENST00000538545 FOXE3Q13461 319 aa10.7□□□□□ -0.7
ACTN1-205ENST00000538545 PRR9Q5T870 116 aa10.7□□□□□ -0.7
ACTN1-205ENST00000538545 Q6ZSV7 163 aa10.7□□□□□ -0.7
ACTN1-205ENST00000538545 A0A1B0GXF2 115 aa10.69□□□□□ -0.7
ACTN1-205ENST00000538545 ORM1P02763 201 aa10.69□□□□□ -0.7
ACTN1-205ENST00000538545 FAM209BQ5JX69 171 aa10.69□□□□□ -0.7
ACTN1-205ENST00000538545 RBPMS2Q6ZRY4 209 aaKnown RBP10.69□□□□□ -0.7
ACTN1-205ENST00000538545 BAGE3Q86Y29 109 aa10.69□□□□□ -0.7
ACTN1-205ENST00000538545 C11orf21Q9P2W6 132 aa10.69□□□□□ -0.7
ACTN1-205ENST00000538545 SMPXQ9UHP9 88 aa10.69□□□□□ -0.7
ACTN1-205ENST00000538545 TRBV6-1A0A0K0K1D8 114 aa10.69□□□□□ -0.7
ACTN1-205ENST00000538545 FAM106AQ4KMX7 169 aa10.69□□□□□ -0.7
ACTN1-205ENST00000538545 A0A1W2PRX2 142 aa10.68□□□□□ -0.7
ACTN1-205ENST00000538545 S100A8P05109 93 aa10.68□□□□□ -0.7
ACTN1-205ENST00000538545 S100A7P31151 101 aa10.68□□□□□ -0.7
ACTN1-205ENST00000538545 HOXD3P31249 432 aaPredicted RBP10.68□□□□□ -0.7
ACTN1-205ENST00000538545 FAM162BQ5T6X4 162 aa10.68□□□□□ -0.7
ACTN1-205ENST00000538545 ATP6V0BQ99437 205 aa10.68□□□□□ -0.7
ACTN1-205ENST00000538545 TMEM189A5PLL7 270 aa10.68□□□□□ -0.7
ACTN1-205ENST00000538545 SOCS3O14543 225 aa10.68□□□□□ -0.7
ACTN1-205ENST00000538545 HLA-DQA1P01909 254 aa10.68□□□□□ -0.7
ACTN1-205ENST00000538545 HBBP68871 147 aa10.68□□□□□ -0.7
ACTN1-205ENST00000538545 COA6Q5JTJ3 125 aaKnown RBP10.68□□□□□ -0.7
ACTN1-205ENST00000538545 WDR73Q6P4I2 378 aa10.68□□□□□ -0.7
ACTN1-205ENST00000538545 LYZL1Q6UWQ5 148 aa10.68□□□□□ -0.7
ACTN1-205ENST00000538545 NRN1Q9NPD7 142 aa10.68□□□□□ -0.7
ACTN1-205ENST00000538545 FOXC2Q99958 501 aa10.67□□□□□ -0.7
ACTN1-205ENST00000538545 CLEC5AQ9NY25 188 aa10.67□□□□□ -0.7
ACTN1-205ENST00000538545 TMEM78Q5T7P6 136 aa10.67□□□□□ -0.7
ACTN1-205ENST00000538545 MSRB1Q9NZV6 116 aa10.67□□□□□ -0.7
ACTN1-205ENST00000538545 HAX1O00165 279 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms