RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 MORN3Q6PF18 240 aaPredicted RBP9.47□□□□□ -0.89
CHFR-216ENST00000538235 PQLC2Q6ZP29 291 aa9.47□□□□□ -0.89
CHFR-216ENST00000538235 Q6ZQT7 251 aa9.47□□□□□ -0.89
CHFR-216ENST00000538235 Q8NAQ8 132 aa9.47□□□□□ -0.89
CHFR-216ENST00000538235 FAM19A4Q96LR4 140 aa9.47□□□□□ -0.89
CHFR-216ENST00000538235 VGLL1Q99990 258 aa9.47□□□□□ -0.89
CHFR-216ENST00000538235 TCEAL7Q9BRU2 100 aa9.47□□□□□ -0.89
CHFR-216ENST00000538235 ZMAT4Q9H898 229 aa9.47□□□□□ -0.89
CHFR-216ENST00000538235 RNF24Q9Y225 148 aa9.47□□□□□ -0.89
CHFR-216ENST00000538235 TP53TG1Q9Y2A0 90 aa9.47□□□□□ -0.89
CHFR-216ENST00000538235 YTHDF2Q9Y5A9 579 aaKnown RBP9.47□□□□□ -0.89
CHFR-216ENST00000538235 ZNF705EA8MWA4 302 aaPredicted RBP9.46□□□□□ -0.9
CHFR-216ENST00000538235 TAS2R45P59539 299 aa9.46□□□□□ -0.9
CHFR-216ENST00000538235 PSG9Q00887 426 aa9.46□□□□□ -0.9
CHFR-216ENST00000538235 FAM74A1Q5RGS3 127 aa9.46□□□□□ -0.9
CHFR-216ENST00000538235 ZNF705AQ6ZN79 300 aaPredicted RBP9.46□□□□□ -0.9
CHFR-216ENST00000538235 Q8TAT8 98 aa9.46□□□□□ -0.9
CHFR-216ENST00000538235 MRPL53Q96EL3 112 aaKnown RBP9.46□□□□□ -0.9
CHFR-216ENST00000538235 NKX6-2Q9C056 277 aaPredicted RBP9.46□□□□□ -0.9
CHFR-216ENST00000538235 ACTR3CQ9C0K3 210 aaPredicted RBP9.46□□□□□ -0.9
CHFR-216ENST00000538235 AGPAT4-IT1Q9H0P7 198 aa9.46□□□□□ -0.9
CHFR-216ENST00000538235 PLECQ15149 4684 aaKnown RBP9.46□□□□□ -0.9
CHFR-216ENST00000538235 A0A0J9YWU9 116 aa9.45□□□□□ -0.9
CHFR-216ENST00000538235 MAP1LC3B2A6NCE7 125 aa9.45□□□□□ -0.9
CHFR-216ENST00000538235 SNAPINO95295 136 aa9.45□□□□□ -0.9
CHFR-216ENST00000538235 MBP02144 154 aa9.45□□□□□ -0.9
CHFR-216ENST00000538235 TPT1P13693 172 aaKnown RBP9.45□□□□□ -0.9
CHFR-216ENST00000538235 AKR1C8PQ5T2L2 129 aa9.45□□□□□ -0.9
CHFR-216ENST00000538235 OR11H2Q8NH07 326 aa9.45□□□□□ -0.9
CHFR-216ENST00000538235 MAP1LC3BQ9GZQ8 125 aa9.45□□□□□ -0.9
CHFR-216ENST00000538235 IGHV4-28A0A0C4DH34 117 aa9.44□□□□□ -0.9
CHFR-216ENST00000538235 A0A1B0GV50 99 aa9.44□□□□□ -0.9
CHFR-216ENST00000538235 SCO1O75880 301 aa9.44□□□□□ -0.9
CHFR-216ENST00000538235 APOC3P02656 99 aa9.44□□□□□ -0.9
CHFR-216ENST00000538235 S100A8P05109 93 aa9.44□□□□□ -0.9
CHFR-216ENST00000538235 S100A9P06702 114 aaKnown RBP9.44□□□□□ -0.9
CHFR-216ENST00000538235 GFI1BQ5VTD9 330 aa9.44□□□□□ -0.9
CHFR-216ENST00000538235 FAM213BQ8TBF2 198 aa9.44□□□□□ -0.9
CHFR-216ENST00000538235 TRAV8-1A0A0A6YYK1 113 aa9.43□□□□□ -0.9
CHFR-216ENST00000538235 PGPA6NDG6 321 aa9.43□□□□□ -0.9
CHFR-216ENST00000538235 DIRC3C9JPN6 131 aa9.43□□□□□ -0.9
CHFR-216ENST00000538235 DUSP14O95147 198 aaKnown RBP9.43□□□□□ -0.9
CHFR-216ENST00000538235 CXorf1O96002 111 aa9.43□□□□□ -0.9
CHFR-216ENST00000538235 UBE2G2P60604 165 aa9.43□□□□□ -0.9
CHFR-216ENST00000538235 CCL20P78556 96 aa9.43□□□□□ -0.9
CHFR-216ENST00000538235 C9orf47Q6ZRZ4 202 aa9.43□□□□□ -0.9
CHFR-216ENST00000538235 ZFAND2AQ8N6M9 145 aa9.43□□□□□ -0.9
CHFR-216ENST00000538235 TVP23CQ96ET8 276 aa9.43□□□□□ -0.9
CHFR-216ENST00000538235 RARRES2Q99969 163 aa9.43□□□□□ -0.9
CHFR-216ENST00000538235 OTORQ9NRC9 128 aa9.43□□□□□ -0.9
CHFR-216ENST00000538235 RPH3ALQ9UNE2 315 aa9.43□□□□□ -0.9
CHFR-216ENST00000538235 CELA1Q9UNI1 258 aa9.43□□□□□ -0.9
CHFR-216ENST00000538235 J3KRW8 73 aa9.42□□□□□ -0.9
CHFR-216ENST00000538235 MBD3L1Q8WWY6 194 aa9.42□□□□□ -0.9
CHFR-216ENST00000538235 SGK494Q96LW2 274 aa9.42□□□□□ -0.9
CHFR-216ENST00000538235 IGF2BP2-AS1Q96M15 143 aa9.42□□□□□ -0.9
CHFR-216ENST00000538235 WWC2-AS2Q96NR7 200 aa9.42□□□□□ -0.9
CHFR-216ENST00000538235 IGHV3OR16-12A0A075B7B8 117 aa9.41□□□□□ -0.9
CHFR-216ENST00000538235 PLAC8L1A1L4L8 177 aa9.41□□□□□ -0.9
CHFR-216ENST00000538235 FAM74A7A6NL05 159 aa9.41□□□□□ -0.9
CHFR-216ENST00000538235 IGLV2-11P01706 119 aa9.41□□□□□ -0.9
CHFR-216ENST00000538235 ATP5G3P48201 142 aa9.41□□□□□ -0.9
CHFR-216ENST00000538235 SULT1A2P50226 295 aa9.41□□□□□ -0.9
CHFR-216ENST00000538235 ALKAL2Q6UX46 152 aa9.41□□□□□ -0.9
CHFR-216ENST00000538235 GOLT1AQ6ZVE7 132 aa9.41□□□□□ -0.9
CHFR-216ENST00000538235 LYPD1Q8N2G4 141 aa9.41□□□□□ -0.9
CHFR-216ENST00000538235 AAMDCQ9H7C9 122 aa9.41□□□□□ -0.9
CHFR-216ENST00000538235 KMT2CQ8NEZ4 4911 aaKnown RBP9.41□□□□□ -0.9
CHFR-216ENST00000538235 LYSTQ99698 3801 aa9.4□□□□□ -0.9
CHFR-216ENST00000538235 KLLNB2CW77 178 aa9.4□□□□□ -0.9
CHFR-216ENST00000538235 AZU1P20160 251 aa9.4□□□□□ -0.9
CHFR-216ENST00000538235 OR10J6PQ8NGY7 276 aa9.4□□□□□ -0.9
CHFR-216ENST00000538235 ODF3Q96PU9 254 aa9.4□□□□□ -0.9
CHFR-216ENST00000538235 C11orf68Q9H3H3 251 aaKnown RBP9.4□□□□□ -0.9
CHFR-216ENST00000538235 ZNF492Q9P255 531 aa9.4□□□□□ -0.9
CHFR-216ENST00000538235 CARHSP1Q9Y2V2 147 aaKnown RBP9.4□□□□□ -0.9
CHFR-216ENST00000538235 TENM2Q9NT68 2774 aa9.4□□□□□ -0.91
CHFR-216ENST00000538235 ALMS1Q8TCU4 4167 aa9.39□□□□□ -0.91
CHFR-216ENST00000538235 ZNF705GA8MUZ8 300 aaPredicted RBP9.39□□□□□ -0.91
CHFR-216ENST00000538235 UMAD1C9J7I0 102 aa9.39□□□□□ -0.91
CHFR-216ENST00000538235 F8W036 122 aa9.39□□□□□ -0.91
CHFR-216ENST00000538235 INSP01308 110 aa9.39□□□□□ -0.91
CHFR-216ENST00000538235 TCRAP04437 139 aa9.39□□□□□ -0.91
CHFR-216ENST00000538235 SLC25A5P05141 298 aaKnown RBP9.39□□□□□ -0.91
CHFR-216ENST00000538235 SMIM6P0DI80 62 aa9.39□□□□□ -0.91
CHFR-216ENST00000538235 CRISP2P16562 243 aa9.39□□□□□ -0.91
CHFR-216ENST00000538235 CDKN1BP46527 198 aa9.39□□□□□ -0.91
CHFR-216ENST00000538235 RAB5BP61020 215 aa9.39□□□□□ -0.91
CHFR-216ENST00000538235 SUMO1P63165 101 aaKnown RBP9.39□□□□□ -0.91
CHFR-216ENST00000538235 SFT2D1Q8WV19 159 aa9.39□□□□□ -0.91
CHFR-216ENST00000538235 LINC00479Q96M42 142 aa9.39□□□□□ -0.91
CHFR-216ENST00000538235 C1QTNF4Q9BXJ3 329 aa9.39□□□□□ -0.91
CHFR-216ENST00000538235 SEC11CQ9BY50 192 aa9.39□□□□□ -0.91
CHFR-216ENST00000538235 TMEM167BQ9NRX6 74 aa9.39□□□□□ -0.91
CHFR-216ENST00000538235 DNAH1Q9P2D7 4330 aa9.39□□□□□ -0.91
CHFR-216ENST00000538235 SACSQ9NZJ4 4579 aa9.39□□□□□ -0.91
CHFR-216ENST00000538235 TMEM218A2RU14 115 aa9.38□□□□□ -0.91
CHFR-216ENST00000538235 NUTF2P61970 127 aaKnown RBP9.38□□□□□ -0.91
CHFR-216ENST00000538235 C10orf91Q5T1B1 145 aa9.38□□□□□ -0.91
CHFR-216ENST00000538235 C5orf17Q8NAS9 161 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms