RNA–Protein interactions for RNA: ENST00000537983.1

NPIPB3-208, Transcript of nuclear pore complex interacting protein family member B3, human

TSL 4

Gene NPIPB3, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB3-208	ENST00000537983	BMI1	P35226	326 aa		4.19	□□□□□ -1.74
NPIPB3-208	ENST00000537983	OR5I1	Q13606	314 aa		4.19	□□□□□ -1.74
NPIPB3-208	ENST00000537983	PSG3	Q16557	428 aa		4.19	□□□□□ -1.74
NPIPB3-208	ENST00000537983	RPEL1	Q2QD12	228 aa		4.19	□□□□□ -1.74
NPIPB3-208	ENST00000537983	ODF3L2	Q3SX64	289 aa		4.19	□□□□□ -1.74
NPIPB3-208	ENST00000537983	C16orf54	Q6UWD8	224 aa		4.19	□□□□□ -1.74
NPIPB3-208	ENST00000537983	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		4.19	□□□□□ -1.74
NPIPB3-208	ENST00000537983	GOLT1A	Q6ZVE7	132 aa		4.19	□□□□□ -1.74
NPIPB3-208	ENST00000537983	TMEM183A	Q8IXX5	376 aa		4.19	□□□□□ -1.74
NPIPB3-208	ENST00000537983	NRAC	Q8N912	160 aa		4.19	□□□□□ -1.74
NPIPB3-208	ENST00000537983	OR4B1	Q8NGF8	309 aa		4.19	□□□□□ -1.74
NPIPB3-208	ENST00000537983	OR4X2	Q8NGF9	303 aa		4.19	□□□□□ -1.74
NPIPB3-208	ENST00000537983	GRAMD2B	Q96HH9	432 aa		4.19	□□□□□ -1.74
NPIPB3-208	ENST00000537983	ZNF331	Q9NQX6	463 aa	Predicted RBP	4.19	□□□□□ -1.74
NPIPB3-208	ENST00000537983	PEMT	Q9UBM1	199 aa		4.19	□□□□□ -1.74
NPIPB3-208	ENST00000537983	PEF1	Q9UBV8	284 aa	Known RBP	4.19	□□□□□ -1.74
NPIPB3-208	ENST00000537983	ZFP30	Q9Y2G7	519 aa		4.19	□□□□□ -1.74
NPIPB3-208	ENST00000537983	IGHV3OR16-8	A0A075B7F1	116 aa		4.18	□□□□□ -1.74
NPIPB3-208	ENST00000537983	SMIM27	A0A1W2PRY6	76 aa		4.18	□□□□□ -1.74
NPIPB3-208	ENST00000537983	ZNF320	A2RRD8	509 aa		4.18	□□□□□ -1.74
NPIPB3-208	ENST00000537983	RBAKDN	A6NC62	111 aa		4.18	□□□□□ -1.74
NPIPB3-208	ENST00000537983	C19orf71	A6NCJ1	209 aa		4.18	□□□□□ -1.74
NPIPB3-208	ENST00000537983	ZNF705G	A8MUZ8	300 aa	Predicted RBP	4.18	□□□□□ -1.74
NPIPB3-208	ENST00000537983		K7EMT4	169 aa		4.18	□□□□□ -1.74
NPIPB3-208	ENST00000537983	GATC	O43716	136 aa	Known RBP	4.18	□□□□□ -1.74
NPIPB3-208	ENST00000537983	IGLV2-11	P01706	119 aa		4.18	□□□□□ -1.74
NPIPB3-208	ENST00000537983	TRBV12-3	P01733	135 aa		4.18	□□□□□ -1.74
NPIPB3-208	ENST00000537983	IGHV3-11	P01762	117 aa		4.18	□□□□□ -1.74
NPIPB3-208	ENST00000537983	S100A6	P06703	90 aa		4.18	□□□□□ -1.74
NPIPB3-208	ENST00000537983	LGALS1	P09382	135 aa	Known RBP	4.18	□□□□□ -1.74
NPIPB3-208	ENST00000537983	COX19	Q49B96	90 aa		4.18	□□□□□ -1.74
NPIPB3-208	ENST00000537983	ACTL10	Q5JWF8	245 aa		4.18	□□□□□ -1.74
NPIPB3-208	ENST00000537983	SAMD13	Q5VXD3	122 aa		4.18	□□□□□ -1.74
NPIPB3-208	ENST00000537983	GPHB5	Q86YW7	130 aa		4.18	□□□□□ -1.74
NPIPB3-208	ENST00000537983	GBGT1	Q8N5D6	347 aa		4.18	□□□□□ -1.74
NPIPB3-208	ENST00000537983	NHLRC2	Q8NBF2	726 aa		4.18	□□□□□ -1.74
NPIPB3-208	ENST00000537983	LINC00479	Q96M42	142 aa		4.18	□□□□□ -1.74
NPIPB3-208	ENST00000537983	C17orf77	Q96MU5	243 aa		4.18	□□□□□ -1.74
NPIPB3-208	ENST00000537983	RNASE7	Q9H1E1	156 aa	Known RBP	4.18	□□□□□ -1.74
NPIPB3-208	ENST00000537983	DAZ1	Q9NQZ3	744 aa	Known RBP	4.18	□□□□□ -1.74
NPIPB3-208	ENST00000537983	SMAD5-AS1	Q9Y6J3	95 aa		4.18	□□□□□ -1.74
NPIPB3-208	ENST00000537983	ZFHX3	Q15911	3703 aa		4.18	□□□□□ -1.74
NPIPB3-208	ENST00000537983	CSMD2	Q7Z408	3487 aa		4.18	□□□□□ -1.74
NPIPB3-208	ENST00000537983	SVEP1	Q4LDE5	3571 aa		4.17	□□□□□ -1.74
NPIPB3-208	ENST00000537983	TRAV8-1	A0A0A6YYK1	113 aa		4.17	□□□□□ -1.74
NPIPB3-208	ENST00000537983	IGLV5-39	A0A0G2JS06	123 aa		4.17	□□□□□ -1.74
NPIPB3-208	ENST00000537983	IGHV7-4-1	A0A0J9YVY3	117 aa		4.17	□□□□□ -1.74
NPIPB3-208	ENST00000537983		A8MWP6	167 aa		4.17	□□□□□ -1.74
NPIPB3-208	ENST00000537983		M0R3E3	92 aa		4.17	□□□□□ -1.74
NPIPB3-208	ENST00000537983	CHEK1	O14757	476 aa		4.17	□□□□□ -1.74
NPIPB3-208	ENST00000537983	PHOX2A	O14813	284 aa		4.17	□□□□□ -1.74
NPIPB3-208	ENST00000537983	ZNF207	O43670	478 aa	Known RBP	4.17	□□□□□ -1.74
NPIPB3-208	ENST00000537983		P01737	135 aa		4.17	□□□□□ -1.74
NPIPB3-208	ENST00000537983	MT-ND6	P03923	174 aa		4.17	□□□□□ -1.74
NPIPB3-208	ENST00000537983	TRGC2	P03986	189 aa		4.17	□□□□□ -1.74
NPIPB3-208	ENST00000537983	CT45A10	P0DMU9	189 aa		4.17	□□□□□ -1.74
NPIPB3-208	ENST00000537983	FAM106A	Q4KMX7	169 aa		4.17	□□□□□ -1.74
NPIPB3-208	ENST00000537983	SAPCD1	Q5SSQ6	148 aa		4.17	□□□□□ -1.74
NPIPB3-208	ENST00000537983	PRR27	Q6MZM9	219 aa		4.17	□□□□□ -1.74
NPIPB3-208	ENST00000537983	RASL11A	Q6T310	242 aa		4.17	□□□□□ -1.74
NPIPB3-208	ENST00000537983	UNQ9165/PRO28630	Q6UXU0	137 aa		4.17	□□□□□ -1.74
NPIPB3-208	ENST00000537983	IL17REL	Q6ZVW7	336 aa		4.17	□□□□□ -1.74
NPIPB3-208	ENST00000537983	COX8C	Q7Z4L0	72 aa		4.17	□□□□□ -1.74
NPIPB3-208	ENST00000537983	PRNT	Q86SH4	94 aa		4.17	□□□□□ -1.74
NPIPB3-208	ENST00000537983	ZFP82	Q8N141	532 aa		4.17	□□□□□ -1.74
NPIPB3-208	ENST00000537983	TSKU	Q8WUA8	353 aa		4.17	□□□□□ -1.74
NPIPB3-208	ENST00000537983	UBE2E2	Q96LR5	201 aa		4.17	□□□□□ -1.74
NPIPB3-208	ENST00000537983	NDFIP1	Q9BT67	221 aa		4.17	□□□□□ -1.74
NPIPB3-208	ENST00000537983	GFRA4	Q9GZZ7	299 aa		4.17	□□□□□ -1.74
NPIPB3-208	ENST00000537983	RPP21	Q9H633	154 aa	Known RBP	4.17	□□□□□ -1.74
NPIPB3-208	ENST00000537983	YAE1D1	Q9NRH1	226 aa		4.17	□□□□□ -1.74
NPIPB3-208	ENST00000537983	PSG8	Q9UQ74	426 aa		4.17	□□□□□ -1.74
NPIPB3-208	ENST00000537983	UFC1	Q9Y3C8	167 aa		4.17	□□□□□ -1.74
NPIPB3-208	ENST00000537983	AKAP9	Q99996	3911 aa		4.16	□□□□□ -1.74
NPIPB3-208	ENST00000537983	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	4.16	□□□□□ -1.74
NPIPB3-208	ENST00000537983	FAM231B	A6NCW3	169 aa		4.16	□□□□□ -1.74
NPIPB3-208	ENST00000537983	IZUMO1R	A6ND01	250 aa		4.16	□□□□□ -1.74
NPIPB3-208	ENST00000537983	C5orf52	A6NGY3	159 aa		4.16	□□□□□ -1.74
NPIPB3-208	ENST00000537983		A8MWL6	223 aa		4.16	□□□□□ -1.74
NPIPB3-208	ENST00000537983	LGALS9	O00182	355 aa		4.16	□□□□□ -1.74
NPIPB3-208	ENST00000537983	UBE2C	O00762	179 aa		4.16	□□□□□ -1.74
NPIPB3-208	ENST00000537983	HIST1H2BK	O60814	126 aa		4.16	□□□□□ -1.74
NPIPB3-208	ENST00000537983	IGKV2D-40	P01614	121 aa	Predicted RBP	4.16	□□□□□ -1.74
NPIPB3-208	ENST00000537983	APOH	P02749	345 aa	Predicted RBP	4.16	□□□□□ -1.74
NPIPB3-208	ENST00000537983	HIST1H2BJ	P06899	126 aa		4.16	□□□□□ -1.74
NPIPB3-208	ENST00000537983	EDN2	P20800	178 aa		4.16	□□□□□ -1.74
NPIPB3-208	ENST00000537983	HIST1H2BO	P23527	126 aa		4.16	□□□□□ -1.74
NPIPB3-208	ENST00000537983	HIST1H2BB	P33778	126 aa		4.16	□□□□□ -1.74
NPIPB3-208	ENST00000537983	HIST1H2BD	P58876	126 aa		4.16	□□□□□ -1.74
NPIPB3-208	ENST00000537983	HIST1H2BC	P62807	126 aa		4.16	□□□□□ -1.74
NPIPB3-208	ENST00000537983	TWIST1	Q15672	202 aa		4.16	□□□□□ -1.74
NPIPB3-208	ENST00000537983	HIST2H2BE	Q16778	126 aa		4.16	□□□□□ -1.74
NPIPB3-208	ENST00000537983	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	4.16	□□□□□ -1.74
NPIPB3-208	ENST00000537983	SERTAD4-AS1	Q5TG53	156 aa		4.16	□□□□□ -1.74
NPIPB3-208	ENST00000537983	WDR73	Q6P4I2	378 aa		4.16	□□□□□ -1.74
NPIPB3-208	ENST00000537983	C10orf99	Q6UWK7	81 aa		4.16	□□□□□ -1.74
NPIPB3-208	ENST00000537983	ATP5L2	Q7Z4Y8	100 aa		4.16	□□□□□ -1.74
NPIPB3-208	ENST00000537983	C4orf3	Q8WVX3	66 aa		4.16	□□□□□ -1.74
NPIPB3-208	ENST00000537983	HIST1H2BH	Q93079	126 aa		4.16	□□□□□ -1.74
NPIPB3-208	ENST00000537983	ZC2HC1A	Q96GY0	325 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms