RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 HIST1H2BAQ96A08 127 aa11.63□□□□□ -0.55
SFSWAP-206ENST00000537582 MRPL53Q96EL3 112 aaKnown RBP11.63□□□□□ -0.55
SFSWAP-206ENST00000537582 PARLQ9H300 379 aa11.63□□□□□ -0.55
SFSWAP-206ENST00000537582 DNHD1Q96M86 4753 aa11.63□□□□□ -0.55
SFSWAP-206ENST00000537582 SORL1Q92673 2214 aa11.62□□□□□ -0.55
SFSWAP-206ENST00000537582 A0A087WWC5 75 aa11.62□□□□□ -0.55
SFSWAP-206ENST00000537582 MT-ND4LP03901 98 aa11.62□□□□□ -0.55
SFSWAP-206ENST00000537582 AKR1C3P42330 323 aa11.62□□□□□ -0.55
SFSWAP-206ENST00000537582 KRTAP21-3Q3LHN1 58 aa11.62□□□□□ -0.55
SFSWAP-206ENST00000537582 TRBV20OR9-2A0A075B6H5 130 aa11.62□□□□□ -0.55
SFSWAP-206ENST00000537582 TMEM250H0YL14 139 aa11.62□□□□□ -0.55
SFSWAP-206ENST00000537582 RPL35P42766 123 aaKnown RBP11.62□□□□□ -0.55
SFSWAP-206ENST00000537582 KRTAP10-11P60412 298 aa11.62□□□□□ -0.55
SFSWAP-206ENST00000537582 HIST1H1AQ02539 215 aaPredicted RBP11.62□□□□□ -0.55
SFSWAP-206ENST00000537582 C19orf73Q9NVV2 129 aa11.62□□□□□ -0.55
SFSWAP-206ENST00000537582 PGPEP1LA6NFU8 196 aa11.61□□□□□ -0.55
SFSWAP-206ENST00000537582 IGKV3-20P01619 116 aa11.61□□□□□ -0.55
SFSWAP-206ENST00000537582 OR8A1Q8NGG7 326 aa11.61□□□□□ -0.55
SFSWAP-206ENST00000537582 TCEAL7Q9BRU2 100 aa11.61□□□□□ -0.55
SFSWAP-206ENST00000537582 AGPAT4-IT1Q9H0P7 198 aa11.61□□□□□ -0.55
SFSWAP-206ENST00000537582 CLEC5AQ9NY25 188 aa11.61□□□□□ -0.55
SFSWAP-206ENST00000537582 RAB5BP61020 215 aa11.6□□□□□ -0.55
SFSWAP-206ENST00000537582 ACTL10Q5JWF8 245 aa11.6□□□□□ -0.55
SFSWAP-206ENST00000537582 PRNTQ86SH4 94 aa11.6□□□□□ -0.55
SFSWAP-206ENST00000537582 NHLRC2Q8NBF2 726 aa11.6□□□□□ -0.55
SFSWAP-206ENST00000537582 TVP23CQ96ET8 276 aa11.6□□□□□ -0.55
SFSWAP-206ENST00000537582 PRR25Q96S07 402 aa11.6□□□□□ -0.55
SFSWAP-206ENST00000537582 GPR61Q9BZJ8 451 aa11.6□□□□□ -0.55
SFSWAP-206ENST00000537582 BIN3Q9NQY0 253 aa11.6□□□□□ -0.55
SFSWAP-206ENST00000537582 AURKAIP1Q9NWT8 199 aaPredicted RBP11.6□□□□□ -0.55
SFSWAP-206ENST00000537582 KLF12Q9Y4X4 402 aa11.6□□□□□ -0.55
SFSWAP-206ENST00000537582 A0A0J9YX75 114 aa11.59□□□□□ -0.55
SFSWAP-206ENST00000537582 OR11H12B2RN74 326 aa11.59□□□□□ -0.55
SFSWAP-206ENST00000537582 CNN1P51911 297 aaKnown RBP11.59□□□□□ -0.55
SFSWAP-206ENST00000537582 TMEM183BQ1AE95 376 aa11.59□□□□□ -0.55
SFSWAP-206ENST00000537582 CENPWQ5EE01 88 aa11.59□□□□□ -0.55
SFSWAP-206ENST00000537582 Q86TA4 180 aa11.59□□□□□ -0.55
SFSWAP-206ENST00000537582 IGF2BP2-AS1Q96M15 143 aa11.59□□□□□ -0.55
SFSWAP-206ENST00000537582 YPEL4Q96NS1 127 aa11.59□□□□□ -0.55
SFSWAP-206ENST00000537582 SMIM7Q9BQ49 75 aa11.59□□□□□ -0.55
SFSWAP-206ENST00000537582 NIPSNAP3BQ9BS92 247 aa11.59□□□□□ -0.55
SFSWAP-206ENST00000537582 SAV1Q9H4B6 383 aaPredicted RBP11.59□□□□□ -0.55
SFSWAP-206ENST00000537582 PSG8Q9UQ74 426 aa11.59□□□□□ -0.55
SFSWAP-206ENST00000537582 ZNF727A8MUV8 499 aa11.58□□□□□ -0.55
SFSWAP-206ENST00000537582 B4DEV8 164 aa11.58□□□□□ -0.55
SFSWAP-206ENST00000537582 NPIPB6E9PJ23 425 aa11.58□□□□□ -0.55
SFSWAP-206ENST00000537582 PNRC1Q12796 327 aaPredicted RBP11.58□□□□□ -0.55
SFSWAP-206ENST00000537582 SAMD5Q5TGI4 173 aa11.58□□□□□ -0.55
SFSWAP-206ENST00000537582 TMEM75Q8N9X5 138 aa11.58□□□□□ -0.55
SFSWAP-206ENST00000537582 OR10J6PQ8NGY7 276 aa11.58□□□□□ -0.55
SFSWAP-206ENST00000537582 RBMY1BA6NDE4 496 aaKnown RBP11.58□□□□□ -0.56
SFSWAP-206ENST00000537582 RBMY1EA6NEQ0 496 aaKnown RBP11.58□□□□□ -0.56
SFSWAP-206ENST00000537582 C1orf196B1AJZ1 125 aa11.58□□□□□ -0.56
SFSWAP-206ENST00000537582 RBMY1DP0C7P1 496 aaKnown RBP11.58□□□□□ -0.56
SFSWAP-206ENST00000537582 CT45A10P0DMU9 189 aa11.58□□□□□ -0.56
SFSWAP-206ENST00000537582 UBE2G1P62253 170 aa11.58□□□□□ -0.56
SFSWAP-206ENST00000537582 FOXI2Q6ZQN5 318 aa11.58□□□□□ -0.56
SFSWAP-206ENST00000537582 C9orf47Q6ZRZ4 202 aa11.58□□□□□ -0.56
SFSWAP-206ENST00000537582 DEFB125Q8N687 156 aa11.58□□□□□ -0.56
SFSWAP-206ENST00000537582 ARL6IP6Q8N6S5 226 aa11.58□□□□□ -0.56
SFSWAP-206ENST00000537582 OR4B1Q8NGF8 309 aa11.58□□□□□ -0.56
SFSWAP-206ENST00000537582 FMC1Q96HJ9 113 aa11.58□□□□□ -0.56
SFSWAP-206ENST00000537582 RBAKDNA6NC62 111 aa11.57□□□□□ -0.56
SFSWAP-206ENST00000537582 CXorf65A6NEN9 183 aa11.57□□□□□ -0.56
SFSWAP-206ENST00000537582 RAB5AP20339 215 aa11.57□□□□□ -0.56
SFSWAP-206ENST00000537582 EBLN2Q6P2I7 272 aa11.57□□□□□ -0.56
SFSWAP-206ENST00000537582 C8orf49Q96NF6 230 aa11.57□□□□□ -0.56
SFSWAP-206ENST00000537582 SERTM2A0A1B0GWG4 89 aa11.56□□□□□ -0.56
SFSWAP-206ENST00000537582 H3BMM0 161 aa11.56□□□□□ -0.56
SFSWAP-206ENST00000537582 K7EQM0 130 aa11.56□□□□□ -0.56
SFSWAP-206ENST00000537582 AGRNO00468 2067 aa11.56□□□□□ -0.56
SFSWAP-206ENST00000537582 IGLV2-8P01709 118 aa11.56□□□□□ -0.56
SFSWAP-206ENST00000537582 HLA-DRB4P13762 266 aa11.56□□□□□ -0.56
SFSWAP-206ENST00000537582 EGFEM1PQ0D2K5 195 aa11.56□□□□□ -0.56
SFSWAP-206ENST00000537582 KIR3DS1Q14943 382 aa11.56□□□□□ -0.56
SFSWAP-206ENST00000537582 GTSCR1Q86UQ5 136 aa11.56□□□□□ -0.56
SFSWAP-206ENST00000537582 Q8N1Y9 231 aa11.56□□□□□ -0.56
SFSWAP-206ENST00000537582 HLA-DRB4X5D2U9 266 aa11.56□□□□□ -0.56
SFSWAP-206ENST00000537582 J3KRW8 73 aa11.55□□□□□ -0.56
SFSWAP-206ENST00000537582 LTAP01374 205 aa11.55□□□□□ -0.56
SFSWAP-206ENST00000537582 GNG4P50150 75 aa11.55□□□□□ -0.56
SFSWAP-206ENST00000537582 ZNF138P52744 262 aa11.55□□□□□ -0.56
SFSWAP-206ENST00000537582 TMEM78Q5T7P6 136 aa11.55□□□□□ -0.56
SFSWAP-206ENST00000537582 BAGE2Q86Y30 109 aa11.55□□□□□ -0.56
SFSWAP-206ENST00000537582 ISOC2Q96AB3 205 aa11.55□□□□□ -0.56
SFSWAP-206ENST00000537582 ZNF492Q9P255 531 aa11.55□□□□□ -0.56
SFSWAP-206ENST00000537582 K7EN84 100 aa11.54□□□□□ -0.56
SFSWAP-206ENST00000537582 FXYD7P58549 80 aa11.54□□□□□ -0.56
SFSWAP-206ENST00000537582 TAS2R60P59551 318 aa11.54□□□□□ -0.56
SFSWAP-206ENST00000537582 PRR9Q5T870 116 aa11.54□□□□□ -0.56
SFSWAP-206ENST00000537582 AMTNQ6UX39 209 aa11.54□□□□□ -0.56
SFSWAP-206ENST00000537582 OCC1Q8TAD7 63 aa11.54□□□□□ -0.56
SFSWAP-206ENST00000537582 MGAM2Q2M2H8 2515 aa11.54□□□□□ -0.56
SFSWAP-206ENST00000537582 TRBV6-1A0A0K0K1D8 114 aa11.54□□□□□ -0.56
SFSWAP-206ENST00000537582 PRB2P02812 416 aaPredicted RBP11.54□□□□□ -0.56
SFSWAP-206ENST00000537582 Q6ZQT7 251 aa11.54□□□□□ -0.56
SFSWAP-206ENST00000537582 FAM19A4Q96LR4 140 aa11.54□□□□□ -0.56
SFSWAP-206ENST00000537582 LINC00477Q96M19 166 aa11.54□□□□□ -0.56
SFSWAP-206ENST00000537582 FAM110AQ9BQ89 295 aa11.54□□□□□ -0.56
SFSWAP-206ENST00000537582 TMEM242Q9NWH2 141 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms