RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 NRGNQ92686 78 aa7.13□□□□□ -1.27
UBE3B-207ENST00000537063 C2orf88Q9BSF0 95 aa7.13□□□□□ -1.27
UBE3B-207ENST00000537063 VAMP8Q9BV40 100 aa7.13□□□□□ -1.27
UBE3B-207ENST00000537063 LINC00527Q9UJ94 153 aa7.13□□□□□ -1.27
UBE3B-207ENST00000537063 IGHV1-24A0A0C4DH33 117 aa7.12□□□□□ -1.27
UBE3B-207ENST00000537063 C9orf47Q6ZRZ4 202 aa7.12□□□□□ -1.27
UBE3B-207ENST00000537063 ZNF843Q8N446 348 aa7.12□□□□□ -1.27
UBE3B-207ENST00000537063 SOCS3O14543 225 aa7.12□□□□□ -1.27
UBE3B-207ENST00000537063 TRBV12-3P01733 135 aa7.12□□□□□ -1.27
UBE3B-207ENST00000537063 PRB1P04280 392 aa7.12□□□□□ -1.27
UBE3B-207ENST00000537063 NTF3P20783 257 aa7.12□□□□□ -1.27
UBE3B-207ENST00000537063 ERCC8Q13216 396 aa7.12□□□□□ -1.27
UBE3B-207ENST00000537063 BORCS7Q96B45 105 aa7.12□□□□□ -1.27
UBE3B-207ENST00000537063 IGHV3-66A0A0C4DH42 116 aa7.12□□□□□ -1.27
UBE3B-207ENST00000537063 FSHBP01225 129 aa7.12□□□□□ -1.27
UBE3B-207ENST00000537063 GPHB5Q86YW7 130 aa7.12□□□□□ -1.27
UBE3B-207ENST00000537063 MIEN1Q9BRT3 115 aa7.12□□□□□ -1.27
UBE3B-207ENST00000537063 LINC00614P0C842 121 aa7.11□□□□□ -1.27
UBE3B-207ENST00000537063 BTF3P20290 206 aaKnown RBP7.11□□□□□ -1.27
UBE3B-207ENST00000537063 BLCAPP62952 87 aa7.11□□□□□ -1.27
UBE3B-207ENST00000537063 UNQ9165/PRO28630Q6UXU0 137 aa7.11□□□□□ -1.27
UBE3B-207ENST00000537063 Q6ZS46 218 aa7.11□□□□□ -1.27
UBE3B-207ENST00000537063 C9orf139Q6ZV77 190 aa7.11□□□□□ -1.27
UBE3B-207ENST00000537063 AGPAT4-IT1Q9H0P7 198 aa7.11□□□□□ -1.27
UBE3B-207ENST00000537063 FABP5P3A8MUU1 101 aa7.11□□□□□ -1.27
UBE3B-207ENST00000537063 M0QZ24 198 aa7.11□□□□□ -1.27
UBE3B-207ENST00000537063 FAM104BQ5XKR9 115 aa7.11□□□□□ -1.27
UBE3B-207ENST00000537063 IL17RELQ6ZVW7 336 aa7.11□□□□□ -1.27
UBE3B-207ENST00000537063 FER1L6-AS1Q8NA97 138 aa7.11□□□□□ -1.27
UBE3B-207ENST00000537063 CELSR2Q9HCU4 2923 aa7.11□□□□□ -1.27
UBE3B-207ENST00000537063 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.11□□□□□ -1.27
UBE3B-207ENST00000537063 ZNF207O43670 478 aaKnown RBP7.1□□□□□ -1.27
UBE3B-207ENST00000537063 COX6B1P14854 86 aa7.1□□□□□ -1.27
UBE3B-207ENST00000537063 KLK15Q9H2R5 256 aa7.1□□□□□ -1.27
UBE3B-207ENST00000537063 FBN2P35556 2912 aa7.1□□□□□ -1.27
UBE3B-207ENST00000537063 CELSR1Q9NYQ6 3014 aa7.1□□□□□ -1.27
UBE3B-207ENST00000537063 TMEM213A2RRL7 107 aa7.1□□□□□ -1.27
UBE3B-207ENST00000537063 SMAD7O15105 426 aaKnown RBP7.1□□□□□ -1.27
UBE3B-207ENST00000537063 OR5AL1P0C617 328 aa7.1□□□□□ -1.27
UBE3B-207ENST00000537063 ZNF138P52744 262 aa7.1□□□□□ -1.27
UBE3B-207ENST00000537063 HIST1H1AQ02539 215 aaPredicted RBP7.1□□□□□ -1.27
UBE3B-207ENST00000537063 LOXL1Q08397 574 aaPredicted RBP7.1□□□□□ -1.27
UBE3B-207ENST00000537063 PMCHL1Q16048 86 aa7.1□□□□□ -1.27
UBE3B-207ENST00000537063 ACACBO00763 2458 aa7.1□□□□□ -1.27
UBE3B-207ENST00000537063 SPATA12Q7Z6I5 190 aa7.1□□□□□ -1.27
UBE3B-207ENST00000537063 PAM16Q9Y3D7 125 aa7.1□□□□□ -1.27
UBE3B-207ENST00000537063 LENEPQ9Y5L5 61 aa7.1□□□□□ -1.27
UBE3B-207ENST00000537063 IGHV3OR16-13A0A075B7E8 117 aa7.09□□□□□ -1.27
UBE3B-207ENST00000537063 IGHV3-74A0A0B4J1X5 117 aa7.09□□□□□ -1.27
UBE3B-207ENST00000537063 TMEM89A2RUT3 159 aa7.09□□□□□ -1.27
UBE3B-207ENST00000537063 CR1P17927 2039 aa7.09□□□□□ -1.27
UBE3B-207ENST00000537063 TMSB15BA0A087X1C1 80 aa7.09□□□□□ -1.27
UBE3B-207ENST00000537063 IGHV3-49A0A0A0MS15 119 aa7.09□□□□□ -1.27
UBE3B-207ENST00000537063 A0A0G2JLM5 398 aa7.09□□□□□ -1.27
UBE3B-207ENST00000537063 EREGO14944 169 aa7.09□□□□□ -1.27
UBE3B-207ENST00000537063 C20orf173Q96LM9 149 aa7.09□□□□□ -1.27
UBE3B-207ENST00000537063 OR4X2Q8NGF9 303 aa7.09□□□□□ -1.27
UBE3B-207ENST00000537063 TMEM70Q9BUB7 260 aa7.09□□□□□ -1.27
UBE3B-207ENST00000537063 SNHG12Q9BXW3 62 aa7.09□□□□□ -1.27
UBE3B-207ENST00000537063 TMEM191AQ9H0A3 160 aa7.09□□□□□ -1.27
UBE3B-207ENST00000537063 UTP20O75691 2785 aaKnown RBP7.09□□□□□ -1.28
UBE3B-207ENST00000537063 PSMB8P28062 276 aa7.08□□□□□ -1.28
UBE3B-207ENST00000537063 DEFB112Q30KQ8 113 aa7.08□□□□□ -1.28
UBE3B-207ENST00000537063 TPPP3Q9BW30 176 aa7.08□□□□□ -1.28
UBE3B-207ENST00000537063 C11orf21Q9P2W6 132 aa7.08□□□□□ -1.28
UBE3B-207ENST00000537063 IGKV3D-20A0A0C4DH25 116 aa7.08□□□□□ -1.28
UBE3B-207ENST00000537063 C20orf202A1L168 122 aa7.08□□□□□ -1.28
UBE3B-207ENST00000537063 LINC01546A6NGU7 62 aa7.08□□□□□ -1.28
UBE3B-207ENST00000537063 MRPL51Q4U2R6 128 aaKnown RBP7.08□□□□□ -1.28
UBE3B-207ENST00000537063 SPATA45Q537H7 98 aa7.08□□□□□ -1.28
UBE3B-207ENST00000537063 TMEM78Q5T7P6 136 aa7.08□□□□□ -1.28
UBE3B-207ENST00000537063 FAM19A4Q96LR4 140 aa7.08□□□□□ -1.28
UBE3B-207ENST00000537063 NPFFR1Q9GZQ6 430 aa7.08□□□□□ -1.28
UBE3B-207ENST00000537063 D6R8Y8 96 aa7.08□□□□□ -1.28
UBE3B-207ENST00000537063 IGHV4-59P01825 116 aa7.08□□□□□ -1.28
UBE3B-207ENST00000537063 PF4V1P10720 104 aa7.08□□□□□ -1.28
UBE3B-207ENST00000537063 AMN1Q8IY45 258 aa7.08□□□□□ -1.28
UBE3B-207ENST00000537063 LRRC75A-AS1Q8N1F1 130 aa7.08□□□□□ -1.28
UBE3B-207ENST00000537063 RNF185Q96GF1 192 aa7.08□□□□□ -1.28
UBE3B-207ENST00000537063 IGHV7-4-1A0A0J9YVY3 117 aa7.07□□□□□ -1.28
UBE3B-207ENST00000537063 SYS1-DBNDD2H3BUS1 97 aa7.07□□□□□ -1.28
UBE3B-207ENST00000537063 K7EMT4 169 aa7.07□□□□□ -1.28
UBE3B-207ENST00000537063 IGLC3P0DOY3 106 aa7.07□□□□□ -1.28
UBE3B-207ENST00000537063 LINC00173Q6ZV60 143 aa7.07□□□□□ -1.28
UBE3B-207ENST00000537063 ORMDL3Q8N138 153 aa7.07□□□□□ -1.28
UBE3B-207ENST00000537063 C16orf92Q96LL3 132 aa7.07□□□□□ -1.28
UBE3B-207ENST00000537063 BEX4Q9NWD9 120 aaPredicted RBP7.07□□□□□ -1.28
UBE3B-207ENST00000537063 LEPROTL1O95214 131 aa7.07□□□□□ -1.28
UBE3B-207ENST00000537063 CACNA1BQ00975 2339 aa7.07□□□□□ -1.28
UBE3B-207ENST00000537063 IGHV4-4A0A075B6R2 117 aa7.07□□□□□ -1.28
UBE3B-207ENST00000537063 TRAV9-2A0A087WT02 112 aa7.07□□□□□ -1.28
UBE3B-207ENST00000537063 A0A096LNJ9 63 aa7.07□□□□□ -1.28
UBE3B-207ENST00000537063 ORM1P02763 201 aa7.07□□□□□ -1.28
UBE3B-207ENST00000537063 IGHV4-31P0DP07 118 aa7.07□□□□□ -1.28
UBE3B-207ENST00000537063 APRG1Q8IVJ8 170 aa7.07□□□□□ -1.28
UBE3B-207ENST00000537063 PRELID3AQ96N28 172 aa7.07□□□□□ -1.28
UBE3B-207ENST00000537063 AP5S1Q9NUS5 200 aa7.07□□□□□ -1.28
UBE3B-207ENST00000537063 M0R143 59 aa7.06□□□□□ -1.28
UBE3B-207ENST00000537063 OVOL1O14753 267 aa7.06□□□□□ -1.28
UBE3B-207ENST00000537063 SNAI2O43623 268 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms