RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 MYOZ3Q8TDC0 251 aa2.93□□□□□ -1.94
MCF2-210ENST00000536274 COQ2Q96H96 371 aa2.93□□□□□ -1.94
MCF2-210ENST00000536274 DNAJC30Q96LL9 226 aa2.93□□□□□ -1.94
MCF2-210ENST00000536274 KLK15Q9H2R5 256 aa2.93□□□□□ -1.94
MCF2-210ENST00000536274 TMEM167BQ9NRX6 74 aa2.93□□□□□ -1.94
MCF2-210ENST00000536274 CADP27708 2225 aa2.93□□□□□ -1.94
MCF2-210ENST00000536274 UBR5O95071 2799 aaPredicted RBP2.93□□□□□ -1.94
MCF2-210ENST00000536274 IGHV5-51A0A0C4DH38 117 aa2.93□□□□□ -1.94
MCF2-210ENST00000536274 ZNF785A8K8V0 405 aa2.93□□□□□ -1.94
MCF2-210ENST00000536274 C12orf77C9JDV5 145 aa2.93□□□□□ -1.94
MCF2-210ENST00000536274 PSPNO60542 156 aa2.93□□□□□ -1.94
MCF2-210ENST00000536274 IGHV4-39P01824 125 aa2.93□□□□□ -1.94
MCF2-210ENST00000536274 IGKCP01834 107 aa2.93□□□□□ -1.94
MCF2-210ENST00000536274 ZNF22P17026 224 aaPredicted RBP2.93□□□□□ -1.94
MCF2-210ENST00000536274 LEPP41159 167 aa2.93□□□□□ -1.94
MCF2-210ENST00000536274 Q8N1Y9 231 aa2.93□□□□□ -1.94
MCF2-210ENST00000536274 EXOC3-AS1Q8N2X6 119 aa2.93□□□□□ -1.94
MCF2-210ENST00000536274 FAM57AQ8TBR7 257 aa2.93□□□□□ -1.94
MCF2-210ENST00000536274 DSCR8Q96T75 97 aa2.93□□□□□ -1.94
MCF2-210ENST00000536274 MSRB1Q9NZV6 116 aa2.93□□□□□ -1.94
MCF2-210ENST00000536274 ZNRD1Q9P1U0 126 aa2.93□□□□□ -1.94
MCF2-210ENST00000536274 TRGV11A0A075B6L2 103 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 TRBV7-3A0A075B6L6 115 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 A0A1W2PPI3 338 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 ZNF503-AS2A6NEH8 195 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 LILRA5A6NI73 299 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 HBDP02042 147 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 SP1P08047 785 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 C8orf88P0DMB2 117 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 ORM2P19652 201 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 HSPE1P61604 102 aaKnown RBP2.92□□□□□ -1.94
MCF2-210ENST00000536274 PATE2Q6UY27 113 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 ZNF826PQ6ZT77 177 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 PAXXQ9BUH6 204 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 AAMDCQ9H7C9 122 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 ITPR1Q14643 2758 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 CUBNO60494 3623 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 ICE1Q9Y2F5 2266 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 MRPS12O15235 138 aaKnown RBP2.92□□□□□ -1.94
MCF2-210ENST00000536274 SPRY2O43597 315 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 SLC25A20O43772 301 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 LOXL3P58215 753 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 FAM231DQ6ZW35 169 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 ATP5L2Q7Z4Y8 100 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 MDP1Q86V88 176 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 PLXDC1Q8IUK5 500 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 ATP6V0E2Q8NHE4 81 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 BAALCQ8WXS3 180 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 TIMD4Q96H15 378 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 BMFQ96LC9 184 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 PRADC1Q9BSG0 188 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 PKIBQ9C010 78 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 MRPL36Q9P0J6 103 aaKnown RBP2.92□□□□□ -1.94
MCF2-210ENST00000536274 MDFICQ9P1T7 246 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 RPUSD1Q9UJJ7 312 aaKnown RBP2.92□□□□□ -1.94
MCF2-210ENST00000536274 IGSF10Q6WRI0 2623 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 TRAV2A0A0B4J234 112 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 J3QLI3 93 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 DUX1O43812 170 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 GRPP07492 148 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 CELA2AP08217 269 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 RPL35AP18077 110 aaKnown RBP2.92□□□□□ -1.94
MCF2-210ENST00000536274 SRYQ05066 204 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 HES1Q14469 280 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 EDDM3AQ14507 147 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 MRPL51Q4U2R6 128 aaKnown RBP2.92□□□□□ -1.94
MCF2-210ENST00000536274 SPRNQ5BIV9 151 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 OR13A1Q8NGR1 328 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 EEF1AKMT3Q96AZ1 226 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 DUX5Q96PT3 197 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 C1orf43Q9BWL3 253 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 OR2H1Q9GZK4 316 aa2.92□□□□□ -1.94
MCF2-210ENST00000536274 MYMXA0A1B0GTQ4 84 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 A0A1B0GUT8 65 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 A0A1W2PNU3 283 aaPredicted RBP2.91□□□□□ -1.94
MCF2-210ENST00000536274 A0A1W2PQD3 144 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 hADV29S1A0JD25 119 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 C19orf71A6NCJ1 209 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 K7EM74 188 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 FAM27E3Q08E93 113 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 Q6P435 159 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 GOLT1AQ6ZVE7 132 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 TMEM75Q8N9X5 138 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 TMEM158Q8WZ71 300 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 C17orf77Q96MU5 243 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 SRXN1Q9BYN0 137 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 PRSS22Q9GZN4 317 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 TRAV8-4A0A0B4J246 113 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 E7EUB6 86 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 INS-IGF2F8WCM5 200 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 NDUFA7O95182 113 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 EIF4EBP1Q13541 118 aaPredicted RBP2.91□□□□□ -1.94
MCF2-210ENST00000536274 CIRBPQ14011 172 aaKnown RBP2.91□□□□□ -1.94
MCF2-210ENST00000536274 PMVKQ15126 192 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.91□□□□□ -1.94
MCF2-210ENST00000536274 LYZL1Q6UWQ5 148 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 IGFL3Q6UXB1 125 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 ZNF497Q6ZNH5 498 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 WDR86Q86TI4 376 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 OR11H6Q8NGC7 330 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms