RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 MRPL23Q16540 153 aaKnown RBP8.88□□□□□ -0.99
TNFRSF1A-207ENST00000535958 TMEM78Q5T7P6 136 aa8.88□□□□□ -0.99
TNFRSF1A-207ENST00000535958 MIC13Q5XKP0 118 aa8.88□□□□□ -0.99
TNFRSF1A-207ENST00000535958 Q6ZRN7 208 aaPredicted RBP8.88□□□□□ -0.99
TNFRSF1A-207ENST00000535958 C11orf72Q8NBR9 251 aa8.88□□□□□ -0.99
TNFRSF1A-207ENST00000535958 ST6GAL2Q96JF0 529 aa8.88□□□□□ -0.99
TNFRSF1A-207ENST00000535958 LINC00477Q96M19 166 aa8.88□□□□□ -0.99
TNFRSF1A-207ENST00000535958 LINC00467Q9BRT7 94 aa8.88□□□□□ -0.99
TNFRSF1A-207ENST00000535958 C20orf85Q9H1P6 137 aa8.88□□□□□ -0.99
TNFRSF1A-207ENST00000535958 UQCC1Q9NVA1 299 aa8.88□□□□□ -0.99
TNFRSF1A-207ENST00000535958 PRO0255Q9UI72 69 aa8.88□□□□□ -0.99
TNFRSF1A-207ENST00000535958 PRELID1Q9Y255 219 aa8.88□□□□□ -0.99
TNFRSF1A-207ENST00000535958 LSM5Q9Y4Y9 91 aaKnown RBP8.88□□□□□ -0.99
TNFRSF1A-207ENST00000535958 TRAV5A0A0B4J249 113 aa8.87□□□□□ -0.99
TNFRSF1A-207ENST00000535958 FAM25EA8MYX2 175 aa8.87□□□□□ -0.99
TNFRSF1A-207ENST00000535958 M0R3E3 92 aa8.87□□□□□ -0.99
TNFRSF1A-207ENST00000535958 SPINK4O60575 86 aa8.87□□□□□ -0.99
TNFRSF1A-207ENST00000535958 PVALBP20472 110 aaPredicted RBP8.87□□□□□ -0.99
TNFRSF1A-207ENST00000535958 ERCC8Q13216 396 aa8.87□□□□□ -0.99
TNFRSF1A-207ENST00000535958 IBA57Q5T440 356 aaKnown RBP8.87□□□□□ -0.99
TNFRSF1A-207ENST00000535958 MRPL16Q9NX20 251 aaKnown RBP8.87□□□□□ -0.99
TNFRSF1A-207ENST00000535958 KLF12Q9Y4X4 402 aa8.87□□□□□ -0.99
TNFRSF1A-207ENST00000535958 HERC1Q15751 4861 aa8.87□□□□□ -0.99
TNFRSF1A-207ENST00000535958 TRBV19A0A075B6N1 114 aa8.86□□□□□ -0.99
TNFRSF1A-207ENST00000535958 TRGV4A0A0C4DH28 118 aa8.86□□□□□ -0.99
TNFRSF1A-207ENST00000535958 UBE2L5PA0A1B0GUS4 154 aa8.86□□□□□ -0.99
TNFRSF1A-207ENST00000535958 KLLNB2CW77 178 aa8.86□□□□□ -0.99
TNFRSF1A-207ENST00000535958 MBPP02686 304 aaPredicted RBP8.86□□□□□ -0.99
TNFRSF1A-207ENST00000535958 DNAH10OSP0CZ25 163 aa8.86□□□□□ -0.99
TNFRSF1A-207ENST00000535958 EVI2AP22794 236 aa8.86□□□□□ -0.99
TNFRSF1A-207ENST00000535958 SRIP30626 198 aa8.86□□□□□ -0.99
TNFRSF1A-207ENST00000535958 ZNF415Q09FC8 603 aa8.86□□□□□ -0.99
TNFRSF1A-207ENST00000535958 PDE6HQ13956 83 aa8.86□□□□□ -0.99
TNFRSF1A-207ENST00000535958 ICAM4Q14773 271 aa8.86□□□□□ -0.99
TNFRSF1A-207ENST00000535958 NEGR1Q7Z3B1 354 aa8.86□□□□□ -0.99
TNFRSF1A-207ENST00000535958 BLNKQ8WV28 456 aa8.86□□□□□ -0.99
TNFRSF1A-207ENST00000535958 C8orf49Q96NF6 230 aa8.86□□□□□ -0.99
TNFRSF1A-207ENST00000535958 VGLL1Q99990 258 aa8.86□□□□□ -0.99
TNFRSF1A-207ENST00000535958 SRRQ9GZT4 340 aa8.86□□□□□ -0.99
TNFRSF1A-207ENST00000535958 HHLA3Q9XRX5 114 aa8.86□□□□□ -0.99
TNFRSF1A-207ENST00000535958 IGHV1OR15-1A0A075B7D0 117 aa8.85□□□□□ -0.99
TNFRSF1A-207ENST00000535958 A0A087WTM6 91 aa8.85□□□□□ -0.99
TNFRSF1A-207ENST00000535958 FAM229AH3BQW9 127 aa8.85□□□□□ -0.99
TNFRSF1A-207ENST00000535958 K7EP13 123 aa8.85□□□□□ -0.99
TNFRSF1A-207ENST00000535958 CST7O76096 145 aa8.85□□□□□ -0.99
TNFRSF1A-207ENST00000535958 CRYBA4P53673 196 aa8.85□□□□□ -0.99
TNFRSF1A-207ENST00000535958 HBG1P69891 147 aa8.85□□□□□ -0.99
TNFRSF1A-207ENST00000535958 HBG2P69892 147 aa8.85□□□□□ -0.99
TNFRSF1A-207ENST00000535958 CD300CQ08708 224 aa8.85□□□□□ -0.99
TNFRSF1A-207ENST00000535958 CNPY1Q3B7I2 92 aa8.85□□□□□ -0.99
TNFRSF1A-207ENST00000535958 STX12Q86Y82 276 aa8.85□□□□□ -0.99
TNFRSF1A-207ENST00000535958 MITD1Q8WV92 249 aa8.85□□□□□ -0.99
TNFRSF1A-207ENST00000535958 GPN1Q9HCN4 374 aaPredicted RBP8.85□□□□□ -0.99
TNFRSF1A-207ENST00000535958 SLC39A9Q9NUM3 307 aa8.85□□□□□ -0.99
TNFRSF1A-207ENST00000535958 MSRB1Q9NZV6 116 aa8.85□□□□□ -0.99
TNFRSF1A-207ENST00000535958 TNFRSF18Q9Y5U5 241 aa8.85□□□□□ -0.99
TNFRSF1A-207ENST00000535958 C5orf51A6NDU8 294 aa8.84□□□□□ -0.99
TNFRSF1A-207ENST00000535958 E5RGE8 158 aa8.84□□□□□ -0.99
TNFRSF1A-207ENST00000535958 CCSO14618 274 aa8.84□□□□□ -0.99
TNFRSF1A-207ENST00000535958 PSCAO43653 123 aa8.84□□□□□ -0.99
TNFRSF1A-207ENST00000535958 PRAF2O60831 178 aa8.84□□□□□ -0.99
TNFRSF1A-207ENST00000535958 NMBP08949 121 aa8.84□□□□□ -0.99
TNFRSF1A-207ENST00000535958 FGF7P21781 194 aa8.84□□□□□ -0.99
TNFRSF1A-207ENST00000535958 GCSHP23434 173 aa8.84□□□□□ -0.99
TNFRSF1A-207ENST00000535958 RPL29P47914 159 aaKnown RBP8.84□□□□□ -0.99
TNFRSF1A-207ENST00000535958 XGP55808 180 aa8.84□□□□□ -0.99
TNFRSF1A-207ENST00000535958 LYPD5Q6UWN5 251 aa8.84□□□□□ -0.99
TNFRSF1A-207ENST00000535958 AGPAT4-IT1Q9H0P7 198 aa8.84□□□□□ -0.99
TNFRSF1A-207ENST00000535958 TMEM14CQ9P0S9 112 aa8.84□□□□□ -0.99
TNFRSF1A-207ENST00000535958 WDR83OSQ9Y284 106 aa8.84□□□□□ -0.99
TNFRSF1A-207ENST00000535958 IGKV2-40A0A087WW87 121 aaPredicted RBP8.83□□□□□ -1
TNFRSF1A-207ENST00000535958 IGKV2D-40P01614 121 aaPredicted RBP8.83□□□□□ -1
TNFRSF1A-207ENST00000535958 PYYP10082 97 aa8.83□□□□□ -1
TNFRSF1A-207ENST00000535958 CRISP2P16562 243 aa8.83□□□□□ -1
TNFRSF1A-207ENST00000535958 S100A11P31949 105 aa8.83□□□□□ -1
TNFRSF1A-207ENST00000535958 S100A10P60903 97 aa8.83□□□□□ -1
TNFRSF1A-207ENST00000535958 FAM122CQ6P4D5 195 aa8.83□□□□□ -1
TNFRSF1A-207ENST00000535958 EXOC3-AS1Q8N2X6 119 aa8.83□□□□□ -1
TNFRSF1A-207ENST00000535958 C10orf126Q8N4M7 172 aa8.83□□□□□ -1
TNFRSF1A-207ENST00000535958 FAM24AA6NFZ4 105 aa8.82□□□□□ -1
TNFRSF1A-207ENST00000535958 ORM1P02763 201 aa8.82□□□□□ -1
TNFRSF1A-207ENST00000535958 SMR3BP02814 79 aaPredicted RBP8.82□□□□□ -1
TNFRSF1A-207ENST00000535958 SULT1A1P50225 295 aa8.82□□□□□ -1
TNFRSF1A-207ENST00000535958 KRTAP10-1P60331 282 aa8.82□□□□□ -1
TNFRSF1A-207ENST00000535958 BAK1Q16611 211 aa8.82□□□□□ -1
TNFRSF1A-207ENST00000535958 C9orf47Q6ZRZ4 202 aa8.82□□□□□ -1
TNFRSF1A-207ENST00000535958 Q6ZSN1 163 aa8.82□□□□□ -1
TNFRSF1A-207ENST00000535958 FAM19A4Q96LR4 140 aa8.82□□□□□ -1
TNFRSF1A-207ENST00000535958 TXNDC17Q9BRA2 123 aa8.82□□□□□ -1
TNFRSF1A-207ENST00000535958 TP53TG3Q9ULZ0 132 aa8.82□□□□□ -1
TNFRSF1A-207ENST00000535958 IGLV5-52A0A0A0MRZ9 124 aa8.81□□□□□ -1
TNFRSF1A-207ENST00000535958 C9JCJ5 164 aa8.81□□□□□ -1
TNFRSF1A-207ENST00000535958 K7EQD1 137 aa8.81□□□□□ -1
TNFRSF1A-207ENST00000535958 NDUFB4O95168 129 aa8.81□□□□□ -1
TNFRSF1A-207ENST00000535958 CRYGDP07320 174 aa8.81□□□□□ -1
TNFRSF1A-207ENST00000535958 GYPEP15421 78 aa8.81□□□□□ -1
TNFRSF1A-207ENST00000535958 CSN1S1P47710 185 aa8.81□□□□□ -1
TNFRSF1A-207ENST00000535958 FHL2Q14192 279 aa8.81□□□□□ -1
TNFRSF1A-207ENST00000535958 WFDC10BQ8IUB3 73 aa8.81□□□□□ -1
TNFRSF1A-207ENST00000535958 MRPL32Q9BYC8 188 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms