RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 ZNF138P52744 262 aa12□□□□□ -0.49
VAMP1-205ENST00000535927 HIST1H1AQ02539 215 aaPredicted RBP12□□□□□ -0.49
VAMP1-205ENST00000535927 GOLT1AQ6ZVE7 132 aa12□□□□□ -0.49
VAMP1-205ENST00000535927 TRPT1Q86TN4 253 aaKnown RBP12□□□□□ -0.49
VAMP1-205ENST00000535927 APRG1Q8IVJ8 170 aa12□□□□□ -0.49
VAMP1-205ENST00000535927 SMIM12Q96EX1 92 aa12□□□□□ -0.49
VAMP1-205ENST00000535927 RARRES2Q99969 163 aa12□□□□□ -0.49
VAMP1-205ENST00000535927 NDFIP1Q9BT67 221 aa12□□□□□ -0.49
VAMP1-205ENST00000535927 C1QTNF4Q9BXJ3 329 aa12□□□□□ -0.49
VAMP1-205ENST00000535927 ZNF492Q9P255 531 aa12□□□□□ -0.49
VAMP1-205ENST00000535927 LOC102724200A0A096LPH7 203 aaPredicted RBP11.99□□□□□ -0.49
VAMP1-205ENST00000535927 LEPP41159 167 aa11.99□□□□□ -0.49
VAMP1-205ENST00000535927 APOC4P55056 127 aa11.99□□□□□ -0.49
VAMP1-205ENST00000535927 UBE2G1P62253 170 aa11.99□□□□□ -0.49
VAMP1-205ENST00000535927 NDUFA5Q16718 116 aa11.99□□□□□ -0.49
VAMP1-205ENST00000535927 FAM74A3Q4VXF1 159 aa11.99□□□□□ -0.49
VAMP1-205ENST00000535927 DEFB125Q8N687 156 aa11.99□□□□□ -0.49
VAMP1-205ENST00000535927 C2CD4CQ8TF44 421 aa11.99□□□□□ -0.49
VAMP1-205ENST00000535927 PCNPQ8WW12 178 aaKnown RBP11.99□□□□□ -0.49
VAMP1-205ENST00000535927 AGPAT4-IT1Q9H0P7 198 aa11.99□□□□□ -0.49
VAMP1-205ENST00000535927 SRD5A3Q9H8P0 318 aa11.99□□□□□ -0.49
VAMP1-205ENST00000535927 PRKDCP78527 4128 aaKnown RBP11.99□□□□□ -0.49
VAMP1-205ENST00000535927 AGRNO00468 2067 aa11.99□□□□□ -0.49
VAMP1-205ENST00000535927 KNCNA6PVL3 124 aa11.98□□□□□ -0.49
VAMP1-205ENST00000535927 PRAC2D3DTV9 90 aa11.98□□□□□ -0.49
VAMP1-205ENST00000535927 CRISP2P16562 243 aa11.98□□□□□ -0.49
VAMP1-205ENST00000535927 FLI1Q01543 452 aaPredicted RBP11.98□□□□□ -0.49
VAMP1-205ENST00000535927 OR4B1Q8NGF8 309 aa11.98□□□□□ -0.49
VAMP1-205ENST00000535927 SLC35B3Q9H1N7 401 aa11.98□□□□□ -0.49
VAMP1-205ENST00000535927 CMYA5Q8N3K9 4069 aa11.97□□□□□ -0.49
VAMP1-205ENST00000535927 IGHV4-30-4P0DP06 118 aa11.97□□□□□ -0.49
VAMP1-205ENST00000535927 GNG5P63218 68 aa11.97□□□□□ -0.49
VAMP1-205ENST00000535927 LINC00322Q6ZN03 302 aaPredicted RBP11.97□□□□□ -0.49
VAMP1-205ENST00000535927 COX8CQ7Z4L0 72 aa11.97□□□□□ -0.49
VAMP1-205ENST00000535927 FAM19A4Q96LR4 140 aa11.97□□□□□ -0.49
VAMP1-205ENST00000535927 VGLL1Q99990 258 aa11.97□□□□□ -0.49
VAMP1-205ENST00000535927 C20orf144Q9BQM9 153 aa11.97□□□□□ -0.49
VAMP1-205ENST00000535927 CSTL1Q9H114 145 aa11.97□□□□□ -0.49
VAMP1-205ENST00000535927 BIN3Q9NQY0 253 aa11.97□□□□□ -0.49
VAMP1-205ENST00000535927 AURKAIP1Q9NWT8 199 aaPredicted RBP11.97□□□□□ -0.49
VAMP1-205ENST00000535927 PSG8Q9UQ74 426 aa11.97□□□□□ -0.49
VAMP1-205ENST00000535927 IGKV2-40A0A087WW87 121 aaPredicted RBP11.96□□□□□ -0.49
VAMP1-205ENST00000535927 SCO2A0A1W2PP80 73 aa11.96□□□□□ -0.49
VAMP1-205ENST00000535927 F6UB75 175 aa11.96□□□□□ -0.49
VAMP1-205ENST00000535927 IGKV2D-40P01614 121 aaPredicted RBP11.96□□□□□ -0.49
VAMP1-205ENST00000535927 IGLV2-11P01706 119 aa11.96□□□□□ -0.49
VAMP1-205ENST00000535927 SRP19P09132 144 aaKnown RBP11.96□□□□□ -0.49
VAMP1-205ENST00000535927 CDKN1BP46527 198 aa11.96□□□□□ -0.49
VAMP1-205ENST00000535927 GDF5OSQ5U4N7 250 aa11.96□□□□□ -0.49
VAMP1-205ENST00000535927 AMTNQ6UX39 209 aa11.96□□□□□ -0.49
VAMP1-205ENST00000535927 CITED4Q96RK1 184 aa11.96□□□□□ -0.49
VAMP1-205ENST00000535927 RPH3ALQ9UNE2 315 aa11.96□□□□□ -0.49
VAMP1-205ENST00000535927 LY96Q9Y6Y9 160 aa11.96□□□□□ -0.49
VAMP1-205ENST00000535927 C9JCJ5 164 aa11.95□□□□□ -0.5
VAMP1-205ENST00000535927 RPL35P42766 123 aaKnown RBP11.95□□□□□ -0.5
VAMP1-205ENST00000535927 LTAP01374 205 aa11.94□□□□□ -0.5
VAMP1-205ENST00000535927 CT45A10P0DMU9 189 aa11.94□□□□□ -0.5
VAMP1-205ENST00000535927 TMEM183AQ8IXX5 376 aa11.94□□□□□ -0.5
VAMP1-205ENST00000535927 TREM1Q9NP99 234 aa11.94□□□□□ -0.5
VAMP1-205ENST00000535927 KLLNB2CW77 178 aa11.93□□□□□ -0.5
VAMP1-205ENST00000535927 ERCC8Q13216 396 aa11.93□□□□□ -0.5
VAMP1-205ENST00000535927 ZNF124Q15973 351 aa11.93□□□□□ -0.5
VAMP1-205ENST00000535927 SOHLH1Q5JUK2 328 aa11.93□□□□□ -0.5
VAMP1-205ENST00000535927 Q6ZWC4 215 aa11.93□□□□□ -0.5
VAMP1-205ENST00000535927 COMMD7Q86VX2 200 aa11.93□□□□□ -0.5
VAMP1-205ENST00000535927 BAGE2Q86Y30 109 aa11.93□□□□□ -0.5
VAMP1-205ENST00000535927 TMEM256Q8N2U0 113 aa11.93□□□□□ -0.5
VAMP1-205ENST00000535927 WFDC10AQ9H1F0 79 aa11.93□□□□□ -0.5
VAMP1-205ENST00000535927 RBMY1BA6NDE4 496 aaKnown RBP11.92□□□□□ -0.5
VAMP1-205ENST00000535927 RBMY1EA6NEQ0 496 aaKnown RBP11.92□□□□□ -0.5
VAMP1-205ENST00000535927 K7EIL1 84 aa11.92□□□□□ -0.5
VAMP1-205ENST00000535927 GPX1P07203 203 aa11.92□□□□□ -0.5
VAMP1-205ENST00000535927 RBMY1DP0C7P1 496 aaKnown RBP11.92□□□□□ -0.5
VAMP1-205ENST00000535927 ZNF705DP0CH99 300 aaPredicted RBP11.92□□□□□ -0.5
VAMP1-205ENST00000535927 ZNF705BP0CI00 300 aaPredicted RBP11.92□□□□□ -0.5
VAMP1-205ENST00000535927 GNG4P50150 75 aa11.92□□□□□ -0.5
VAMP1-205ENST00000535927 SMUG1Q53HV7 270 aa11.92□□□□□ -0.5
VAMP1-205ENST00000535927 PRNTQ86SH4 94 aa11.92□□□□□ -0.5
VAMP1-205ENST00000535927 Q86TA4 180 aa11.92□□□□□ -0.5
VAMP1-205ENST00000535927 IGF2BP2-AS1Q96M15 143 aa11.92□□□□□ -0.5
VAMP1-205ENST00000535927 ASCL2Q99929 193 aa11.92□□□□□ -0.5
VAMP1-205ENST00000535927 PARLQ9H300 379 aa11.92□□□□□ -0.5
VAMP1-205ENST00000535927 TRAV8-1A0A0A6YYK1 113 aa11.91□□□□□ -0.5
VAMP1-205ENST00000535927 TRAV34A0A0B4J273 112 aa11.91□□□□□ -0.5
VAMP1-205ENST00000535927 ZNF727A8MUV8 499 aa11.91□□□□□ -0.5
VAMP1-205ENST00000535927 DEFB1P60022 68 aa11.91□□□□□ -0.5
VAMP1-205ENST00000535927 LINC00479Q96M42 142 aa11.91□□□□□ -0.5
VAMP1-205ENST00000535927 MLST8Q9BVC4 326 aa11.91□□□□□ -0.5
VAMP1-205ENST00000535927 RPL35AP18077 110 aaKnown RBP11.9□□□□□ -0.5
VAMP1-205ENST00000535927 Q6AWC8 147 aa11.9□□□□□ -0.5
VAMP1-205ENST00000535927 ZFAND2AQ8N6M9 145 aa11.9□□□□□ -0.5
VAMP1-205ENST00000535927 SMIM7Q9BQ49 75 aa11.9□□□□□ -0.5
VAMP1-205ENST00000535927 TP53TG1Q9Y2A0 90 aa11.9□□□□□ -0.5
VAMP1-205ENST00000535927 C7orf71A4D174 169 aa11.89□□□□□ -0.51
VAMP1-205ENST00000535927 FABP5P3A8MUU1 101 aa11.89□□□□□ -0.51
VAMP1-205ENST00000535927 INSP01308 110 aa11.89□□□□□ -0.51
VAMP1-205ENST00000535927 IGKV3-20P01619 116 aa11.89□□□□□ -0.51
VAMP1-205ENST00000535927 FRMD6-AS1P0C7T7 363 aa11.89□□□□□ -0.51
VAMP1-205ENST00000535927 SRSF3P84103 164 aaKnown RBP11.89□□□□□ -0.51
VAMP1-205ENST00000535927 TMEM241Q24JQ0 296 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms