RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 ZNF726P1Q15940 193 aa8.91□□□□□ -0.98
USF1-211ENST00000534633 RNF212Q495C1 297 aa8.91□□□□□ -0.98
USF1-211ENST00000534633 EBLN2Q6P2I7 272 aa8.91□□□□□ -0.98
USF1-211ENST00000534633 AKAP14Q86UN6 197 aa8.91□□□□□ -0.98
USF1-211ENST00000534633 EXOC3-AS1Q8N2X6 119 aa8.91□□□□□ -0.98
USF1-211ENST00000534633 RAB24Q969Q5 203 aa8.91□□□□□ -0.98
USF1-211ENST00000534633 RPUSD4Q96CM3 377 aaKnown RBP8.91□□□□□ -0.98
USF1-211ENST00000534633 SLC35B3Q9H1N7 401 aa8.91□□□□□ -0.98
USF1-211ENST00000534633 DNAH17Q9UFH2 4485 aa8.91□□□□□ -0.98
USF1-211ENST00000534633 A0A1W2PPV4 95 aa8.9□□□□□ -0.98
USF1-211ENST00000534633 HBE1P02100 147 aa8.9□□□□□ -0.98
USF1-211ENST00000534633 STAG3L2P0CL84 134 aa8.9□□□□□ -0.98
USF1-211ENST00000534633 STAG3L3P0CL85 134 aa8.9□□□□□ -0.98
USF1-211ENST00000534633 PDE6HQ13956 83 aa8.9□□□□□ -0.98
USF1-211ENST00000534633 SOHLH1Q5JUK2 328 aa8.9□□□□□ -0.98
USF1-211ENST00000534633 C1orf158Q8N1D5 194 aa8.9□□□□□ -0.98
USF1-211ENST00000534633 ZNF738Q8NE65 137 aa8.9□□□□□ -0.98
USF1-211ENST00000534633 OR8A1Q8NGG7 326 aa8.9□□□□□ -0.98
USF1-211ENST00000534633 PHYHIPLQ96FC7 376 aa8.9□□□□□ -0.98
USF1-211ENST00000534633 PKD1P98161 4303 aa8.89□□□□□ -0.99
USF1-211ENST00000534633 IGLV2-18A0A075B6J9 118 aa8.89□□□□□ -0.99
USF1-211ENST00000534633 LOC102723971A0A1B0GUV8 181 aa8.89□□□□□ -0.99
USF1-211ENST00000534633 OR7C2O60412 319 aa8.89□□□□□ -0.99
USF1-211ENST00000534633 MBP02144 154 aa8.89□□□□□ -0.99
USF1-211ENST00000534633 RRN3P1Q2M238 152 aa8.89□□□□□ -0.99
USF1-211ENST00000534633 KHDC3LQ587J8 217 aa8.89□□□□□ -0.99
USF1-211ENST00000534633 SUN5Q8TC36 379 aa8.89□□□□□ -0.99
USF1-211ENST00000534633 HYLS1Q96M11 299 aa8.89□□□□□ -0.99
USF1-211ENST00000534633 YTHDF2Q9Y5A9 579 aaKnown RBP8.89□□□□□ -0.99
USF1-211ENST00000534633 CRXO43186 299 aaPredicted RBP8.88□□□□□ -0.99
USF1-211ENST00000534633 HTN3P15516 51 aa8.88□□□□□ -0.99
USF1-211ENST00000534633 CDC34P49427 236 aaPredicted RBP8.88□□□□□ -0.99
USF1-211ENST00000534633 FHITP49789 147 aa8.88□□□□□ -0.99
USF1-211ENST00000534633 TAS2R45P59539 299 aa8.88□□□□□ -0.99
USF1-211ENST00000534633 DAD1P61803 113 aa8.88□□□□□ -0.99
USF1-211ENST00000534633 RANP62826 216 aaKnown RBP8.88□□□□□ -0.99
USF1-211ENST00000534633 ICAM4Q14773 271 aa8.88□□□□□ -0.99
USF1-211ENST00000534633 C9orf62Q8N4C0 152 aa8.88□□□□□ -0.99
USF1-211ENST00000534633 ZNF471Q9BX82 626 aaPredicted RBP8.88□□□□□ -0.99
USF1-211ENST00000534633 KANTRA0A1W2PQU2 76 aa8.87□□□□□ -0.99
USF1-211ENST00000534633 DUSP14O95147 198 aaKnown RBP8.87□□□□□ -0.99
USF1-211ENST00000534633 SEC11BP0C7V7 166 aa8.87□□□□□ -0.99
USF1-211ENST00000534633 ARL14EPLP0DKL9 152 aa8.87□□□□□ -0.99
USF1-211ENST00000534633 FAM3BP58499 235 aaPredicted RBP8.87□□□□□ -0.99
USF1-211ENST00000534633 UBE2L3P68036 154 aaKnown RBP8.87□□□□□ -0.99
USF1-211ENST00000534633 HIST1H1AQ02539 215 aaPredicted RBP8.87□□□□□ -0.99
USF1-211ENST00000534633 KIR3DS1Q14943 382 aa8.87□□□□□ -0.99
USF1-211ENST00000534633 TMEM88Q6PEY1 159 aa8.87□□□□□ -0.99
USF1-211ENST00000534633 PQLC2Q6ZP29 291 aa8.87□□□□□ -0.99
USF1-211ENST00000534633 BAP18Q8IXM2 172 aa8.87□□□□□ -0.99
USF1-211ENST00000534633 C15orf53Q8NAA6 179 aa8.87□□□□□ -0.99
USF1-211ENST00000534633 MRPL53Q96EL3 112 aaKnown RBP8.87□□□□□ -0.99
USF1-211ENST00000534633 IGF2BP2-AS1Q96M15 143 aa8.87□□□□□ -0.99
USF1-211ENST00000534633 ACTR3CQ9C0K3 210 aaPredicted RBP8.87□□□□□ -0.99
USF1-211ENST00000534633 NPIPB6E9PJ23 425 aa8.86□□□□□ -0.99
USF1-211ENST00000534633 M0R2Z0 102 aa8.86□□□□□ -0.99
USF1-211ENST00000534633 PFDN1O60925 122 aa8.86□□□□□ -0.99
USF1-211ENST00000534633 CT45A10P0DMU9 189 aa8.86□□□□□ -0.99
USF1-211ENST00000534633 GCHFRP30047 84 aa8.86□□□□□ -0.99
USF1-211ENST00000534633 C1orf134Q5TEV5 83 aa8.86□□□□□ -0.99
USF1-211ENST00000534633 LYPD1Q8N2G4 141 aa8.86□□□□□ -0.99
USF1-211ENST00000534633 STOML3Q8TAV4 291 aa8.86□□□□□ -0.99
USF1-211ENST00000534633 TMEM208Q9BTX3 173 aa8.86□□□□□ -0.99
USF1-211ENST00000534633 AGPAT4-IT1Q9H0P7 198 aa8.86□□□□□ -0.99
USF1-211ENST00000534633 Q9H3A6 140 aa8.86□□□□□ -0.99
USF1-211ENST00000534633 TMPRSS5Q9H3S3 457 aa8.86□□□□□ -0.99
USF1-211ENST00000534633 CTXND1A0A1B0GTU2 59 aa8.85□□□□□ -0.99
USF1-211ENST00000534633 ERCC8Q13216 396 aa8.85□□□□□ -0.99
USF1-211ENST00000534633 SPINK13Q1W4C9 94 aa8.85□□□□□ -0.99
USF1-211ENST00000534633 AKR1C8PQ5T2L2 129 aa8.85□□□□□ -0.99
USF1-211ENST00000534633 TMED6Q8WW62 240 aa8.85□□□□□ -0.99
USF1-211ENST00000534633 FAM19A4Q96LR4 140 aa8.85□□□□□ -0.99
USF1-211ENST00000534633 VGLL1Q99990 258 aa8.85□□□□□ -0.99
USF1-211ENST00000534633 PRELID1Q9Y255 219 aa8.85□□□□□ -0.99
USF1-211ENST00000534633 TRAV12-2A0A075B6T6 113 aa8.84□□□□□ -0.99
USF1-211ENST00000534633 IGKV2-40A0A087WW87 121 aaPredicted RBP8.84□□□□□ -0.99
USF1-211ENST00000534633 PGPA6NDG6 321 aa8.84□□□□□ -0.99
USF1-211ENST00000534633 LYRM9A8MSI8 78 aa8.84□□□□□ -0.99
USF1-211ENST00000534633 CXorf1O96002 111 aa8.84□□□□□ -0.99
USF1-211ENST00000534633 INSP01308 110 aa8.84□□□□□ -0.99
USF1-211ENST00000534633 IGKV2D-40P01614 121 aaPredicted RBP8.84□□□□□ -0.99
USF1-211ENST00000534633 PRM2P04554 102 aa8.84□□□□□ -0.99
USF1-211ENST00000534633 TPT1P13693 172 aaKnown RBP8.84□□□□□ -0.99
USF1-211ENST00000534633 NKX2-5P52952 324 aaPredicted RBP8.84□□□□□ -0.99
USF1-211ENST00000534633 ZFP69Q49AA0 526 aa8.84□□□□□ -0.99
USF1-211ENST00000534633 ZNF575Q86XF7 245 aa8.84□□□□□ -0.99
USF1-211ENST00000534633 AAMDCQ9H7C9 122 aa8.84□□□□□ -0.99
USF1-211ENST00000534633 DIRC3C9JPN6 131 aa8.83□□□□□ -1
USF1-211ENST00000534633 BOLA2-SMG1P6H3BVE0 249 aa8.83□□□□□ -1
USF1-211ENST00000534633 TSPOP30536 169 aa8.83□□□□□ -1
USF1-211ENST00000534633 FGF8P55075 233 aaPredicted RBP8.83□□□□□ -1
USF1-211ENST00000534633 C9orf47Q6ZRZ4 202 aa8.83□□□□□ -1
USF1-211ENST00000534633 OR10J6PQ8NGY7 276 aa8.83□□□□□ -1
USF1-211ENST00000534633 MBD3L1Q8WWY6 194 aa8.83□□□□□ -1
USF1-211ENST00000534633 ATG101Q9BSB4 218 aa8.83□□□□□ -1
USF1-211ENST00000534633 OTORQ9NRC9 128 aa8.83□□□□□ -1
USF1-211ENST00000534633 BOLA1Q9Y3E2 137 aa8.83□□□□□ -1
USF1-211ENST00000534633 DNAH11Q96DT5 4516 aa8.82□□□□□ -1
USF1-211ENST00000534633 UMAD1C9J7I0 102 aa8.82□□□□□ -1
USF1-211ENST00000534633 SLC51BQ86UW2 128 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms