RNA–Protein interactions for RNA: ENST00000534273.1

PACS1-215, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-215ENST00000534273 UBE2L3P68036 154 aaKnown RBP13.48□□□□□ -0.25
PACS1-215ENST00000534273 C9orf47Q6ZRZ4 202 aa13.48□□□□□ -0.25
PACS1-215ENST00000534273 FAM19A4Q96LR4 140 aa13.48□□□□□ -0.25
PACS1-215ENST00000534273 IGKV2-40A0A087WW87 121 aaPredicted RBP13.47□□□□□ -0.25
PACS1-215ENST00000534273 J3KRW8 73 aa13.47□□□□□ -0.25
PACS1-215ENST00000534273 IGKV2D-40P01614 121 aaPredicted RBP13.47□□□□□ -0.25
PACS1-215ENST00000534273 DAD1P61803 113 aa13.47□□□□□ -0.25
PACS1-215ENST00000534273 RANP62826 216 aaKnown RBP13.47□□□□□ -0.25
PACS1-215ENST00000534273 ZNF493Q6ZR52 646 aa13.47□□□□□ -0.25
PACS1-215ENST00000534273 LYPD1Q8N2G4 141 aa13.47□□□□□ -0.25
PACS1-215ENST00000534273 C9orf62Q8N4C0 152 aa13.47□□□□□ -0.25
PACS1-215ENST00000534273 HSD17B11Q8NBQ5 300 aa13.47□□□□□ -0.25
PACS1-215ENST00000534273 INO80EQ8NBZ0 244 aaPredicted RBP13.47□□□□□ -0.25
PACS1-215ENST00000534273 OR2G3Q8NGZ4 309 aa13.47□□□□□ -0.25
PACS1-215ENST00000534273 VGLL1Q99990 258 aa13.47□□□□□ -0.25
PACS1-215ENST00000534273 FXYD6-FXYD2A0A087WZ82 144 aa13.46□□□□□ -0.25
PACS1-215ENST00000534273 TRAV12-3A0A0B4J271 114 aa13.46□□□□□ -0.25
PACS1-215ENST00000534273 RNF222A6NCQ9 220 aa13.46□□□□□ -0.25
PACS1-215ENST00000534273 OR10G4Q8NGN3 311 aa13.46□□□□□ -0.25
PACS1-215ENST00000534273 OR10G9Q8NGN4 311 aa13.46□□□□□ -0.25
PACS1-215ENST00000534273 OR10G7Q8NGN6 311 aa13.46□□□□□ -0.25
PACS1-215ENST00000534273 RNASE8Q8TDE3 154 aaKnown RBP13.46□□□□□ -0.25
PACS1-215ENST00000534273 C16orf74Q96GX8 76 aa13.46□□□□□ -0.25
PACS1-215ENST00000534273 PSMG3Q9BT73 122 aaPredicted RBP13.46□□□□□ -0.25
PACS1-215ENST00000534273 Q9H3A6 140 aa13.46□□□□□ -0.25
PACS1-215ENST00000534273 TNFSF18Q9UNG2 199 aa13.46□□□□□ -0.25
PACS1-215ENST00000534273 A0A1W2PPV4 95 aa13.45□□□□□ -0.26
PACS1-215ENST00000534273 KLLNB2CW77 178 aa13.45□□□□□ -0.26
PACS1-215ENST00000534273 SLC25A5P05141 298 aaKnown RBP13.45□□□□□ -0.26
PACS1-215ENST00000534273 ATP6V0CP27449 155 aa13.45□□□□□ -0.26
PACS1-215ENST00000534273 TMEM263Q8WUH6 116 aaKnown RBP13.45□□□□□ -0.26
PACS1-215ENST00000534273 FAM210BQ96KR6 192 aa13.45□□□□□ -0.26
PACS1-215ENST00000534273 VPS13DQ5THJ4 4388 aa13.45□□□□□ -0.26
PACS1-215ENST00000534273 C7orf71A4D174 169 aa13.44□□□□□ -0.26
PACS1-215ENST00000534273 HTN3P15516 51 aa13.44□□□□□ -0.26
PACS1-215ENST00000534273 CRISP2P16562 243 aa13.44□□□□□ -0.26
PACS1-215ENST00000534273 TMEM78Q5T7P6 136 aa13.44□□□□□ -0.26
PACS1-215ENST00000534273 PQLC2Q6ZP29 291 aa13.44□□□□□ -0.26
PACS1-215ENST00000534273 NDUFAF3Q9BU61 184 aa13.44□□□□□ -0.26
PACS1-215ENST00000534273 NMBP08949 121 aa13.43□□□□□ -0.26
PACS1-215ENST00000534273 DEFB130BP0DP73 79 aa13.43□□□□□ -0.26
PACS1-215ENST00000534273 DEFB130AP0DP74 79 aa13.43□□□□□ -0.26
PACS1-215ENST00000534273 RNASE4P34096 147 aaKnown RBP13.43□□□□□ -0.26
PACS1-215ENST00000534273 CSN1S1P47710 185 aa13.43□□□□□ -0.26
PACS1-215ENST00000534273 LGALSLQ3ZCW2 172 aaPredicted RBP13.43□□□□□ -0.26
PACS1-215ENST00000534273 CCDC28AQ8IWP9 274 aa13.43□□□□□ -0.26
PACS1-215ENST00000534273 SH3BGRL3Q9H299 93 aa13.43□□□□□ -0.26
PACS1-215ENST00000534273 ZNF492Q9P255 531 aa13.43□□□□□ -0.26
PACS1-215ENST00000534273 TIMM8BQ9Y5J9 83 aaPredicted RBP13.43□□□□□ -0.26
PACS1-215ENST00000534273 HMGB3O15347 200 aaKnown RBP13.42□□□□□ -0.26
PACS1-215ENST00000534273 ZNF324O75467 553 aaPredicted RBP13.42□□□□□ -0.26
PACS1-215ENST00000534273 ZNF138P52744 262 aa13.42□□□□□ -0.26
PACS1-215ENST00000534273 SERF2P84101 59 aa13.42□□□□□ -0.26
PACS1-215ENST00000534273 BTN1A1Q13410 526 aa13.42□□□□□ -0.26
PACS1-215ENST00000534273 RPL7L1Q6DKI1 246 aaKnown RBP13.42□□□□□ -0.26
PACS1-215ENST00000534273 ZFAND2AQ8N6M9 145 aa13.42□□□□□ -0.26
PACS1-215ENST00000534273 PYGO2Q9BRQ0 406 aa13.42□□□□□ -0.26
PACS1-215ENST00000534273 NOP10Q9NPE3 64 aaKnown RBP13.42□□□□□ -0.26
PACS1-215ENST00000534273 OTORQ9NRC9 128 aa13.42□□□□□ -0.26
PACS1-215ENST00000534273 KMT2AQ03164 3969 aa13.41□□□□□ -0.26
PACS1-215ENST00000534273 RBAKDNA6NC62 111 aa13.41□□□□□ -0.26
PACS1-215ENST00000534273 MBP02144 154 aa13.41□□□□□ -0.26
PACS1-215ENST00000534273 GPX1P07203 203 aa13.41□□□□□ -0.26
PACS1-215ENST00000534273 CDC34P49427 236 aaPredicted RBP13.41□□□□□ -0.26
PACS1-215ENST00000534273 RXFP4Q8TDU9 374 aa13.41□□□□□ -0.26
PACS1-215ENST00000534273 BORCS7-ASMTA0A0B4J1R7 106 aa13.4□□□□□ -0.26
PACS1-215ENST00000534273 A0A0D9SG52 128 aa13.4□□□□□ -0.26
PACS1-215ENST00000534273 TRBV7-9A0A0J9YWB2 115 aa13.4□□□□□ -0.26
PACS1-215ENST00000534273 DIRC3C9JPN6 131 aa13.4□□□□□ -0.26
PACS1-215ENST00000534273 STAG3L2P0CL84 134 aa13.4□□□□□ -0.26
PACS1-215ENST00000534273 STAG3L3P0CL85 134 aa13.4□□□□□ -0.26
PACS1-215ENST00000534273 ARL14EPLP0DKL9 152 aa13.4□□□□□ -0.26
PACS1-215ENST00000534273 ZNF345Q14585 488 aa13.4□□□□□ -0.26
PACS1-215ENST00000534273 PRR9Q5T870 116 aa13.4□□□□□ -0.26
PACS1-215ENST00000534273 Q8TAT8 98 aa13.4□□□□□ -0.26
PACS1-215ENST00000534273 RAB24Q969Q5 203 aa13.4□□□□□ -0.26
PACS1-215ENST00000534273 GNPNAT1Q96EK6 184 aaPredicted RBP13.4□□□□□ -0.26
PACS1-215ENST00000534273 LINC00467Q9BRT7 94 aa13.4□□□□□ -0.26
PACS1-215ENST00000534273 PGPA6NDG6 321 aa13.39□□□□□ -0.27
PACS1-215ENST00000534273 CBY3A6NI87 242 aa13.39□□□□□ -0.27
PACS1-215ENST00000534273 TMEM88Q6PEY1 159 aa13.39□□□□□ -0.27
PACS1-215ENST00000534273 BOLA1Q9Y3E2 137 aa13.39□□□□□ -0.27
PACS1-215ENST00000534273 ARPC5O15511 151 aa13.38□□□□□ -0.27
PACS1-215ENST00000534273 KCNRGQ8N5I3 272 aa13.38□□□□□ -0.27
PACS1-215ENST00000534273 LINC00612Q8N6U2 182 aa13.38□□□□□ -0.27
PACS1-215ENST00000534273 P0DMU3 169 aa13.37□□□□□ -0.27
PACS1-215ENST00000534273 FAM231AP0DMU4 169 aa13.37□□□□□ -0.27
PACS1-215ENST00000534273 FAM231CP0DMU5 169 aa13.37□□□□□ -0.27
PACS1-215ENST00000534273 GCHFRP30047 84 aa13.37□□□□□ -0.27
PACS1-215ENST00000534273 IFITM2Q01629 132 aa13.37□□□□□ -0.27
PACS1-215ENST00000534273 FAM74A1Q5RGS3 127 aa13.37□□□□□ -0.27
PACS1-215ENST00000534273 Q6ZQT7 251 aa13.37□□□□□ -0.27
PACS1-215ENST00000534273 TMUB2Q71RG4 321 aa13.37□□□□□ -0.27
PACS1-215ENST00000534273 ARL6IP6Q8N6S5 226 aa13.37□□□□□ -0.27
PACS1-215ENST00000534273 CMTM2Q8TAZ6 248 aa13.37□□□□□ -0.27
PACS1-215ENST00000534273 SUN5Q8TC36 379 aa13.37□□□□□ -0.27
PACS1-215ENST00000534273 ACTR3CQ9C0K3 210 aaPredicted RBP13.37□□□□□ -0.27
PACS1-215ENST00000534273 SNURFLB1AK76 121 aa13.36□□□□□ -0.27
PACS1-215ENST00000534273 TAAR5O14804 337 aa13.36□□□□□ -0.27
PACS1-215ENST00000534273 RGS13O14921 159 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms