RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 IGKV2-40A0A087WW87 121 aaPredicted RBP11.32□□□□□ -0.6
TSKU-204ENST00000533752 DEFB131BA0A096LNP1 70 aa11.32□□□□□ -0.6
TSKU-204ENST00000533752 TRBV7-9A0A0J9YWB2 115 aa11.32□□□□□ -0.6
TSKU-204ENST00000533752 IGKV2D-40P01614 121 aaPredicted RBP11.32□□□□□ -0.6
TSKU-204ENST00000533752 ARL14EPLP0DKL9 152 aa11.32□□□□□ -0.6
TSKU-204ENST00000533752 CMTM2Q8TAZ6 248 aa11.32□□□□□ -0.6
TSKU-204ENST00000533752 TMEM263Q8WUH6 116 aaKnown RBP11.32□□□□□ -0.6
TSKU-204ENST00000533752 ACTR3CQ9C0K3 210 aaPredicted RBP11.32□□□□□ -0.6
TSKU-204ENST00000533752 AGPAT4-IT1Q9H0P7 198 aa11.32□□□□□ -0.6
TSKU-204ENST00000533752 C7orf71A4D174 169 aa11.31□□□□□ -0.6
TSKU-204ENST00000533752 KLLNB2CW77 178 aa11.31□□□□□ -0.6
TSKU-204ENST00000533752 IGLL5B9A064 214 aa11.31□□□□□ -0.6
TSKU-204ENST00000533752 STAG3L2P0CL84 134 aa11.31□□□□□ -0.6
TSKU-204ENST00000533752 STAG3L3P0CL85 134 aa11.31□□□□□ -0.6
TSKU-204ENST00000533752 CRISP2P16562 243 aa11.31□□□□□ -0.6
TSKU-204ENST00000533752 ERCC8Q13216 396 aa11.31□□□□□ -0.6
TSKU-204ENST00000533752 ZNF767PQ75MW2 155 aa11.31□□□□□ -0.6
TSKU-204ENST00000533752 CCDC28AQ8IWP9 274 aa11.31□□□□□ -0.6
TSKU-204ENST00000533752 ARL6IP6Q8N6S5 226 aa11.31□□□□□ -0.6
TSKU-204ENST00000533752 RAB24Q969Q5 203 aa11.31□□□□□ -0.6
TSKU-204ENST00000533752 FAM19A4Q96LR4 140 aa11.31□□□□□ -0.6
TSKU-204ENST00000533752 PYGO2Q9BRQ0 406 aa11.31□□□□□ -0.6
TSKU-204ENST00000533752 HMSDA8MTL9 139 aa11.3□□□□□ -0.6
TSKU-204ENST00000533752 SMLR1H3BR10 107 aa11.3□□□□□ -0.6
TSKU-204ENST00000533752 J3KRW8 73 aa11.3□□□□□ -0.6
TSKU-204ENST00000533752 HTN1P15515 57 aa11.3□□□□□ -0.6
TSKU-204ENST00000533752 ZNF138P52744 262 aa11.3□□□□□ -0.6
TSKU-204ENST00000533752 DAD1P61803 113 aa11.3□□□□□ -0.6
TSKU-204ENST00000533752 KIR3DS1Q14943 382 aa11.3□□□□□ -0.6
TSKU-204ENST00000533752 VGLL1Q99990 258 aa11.3□□□□□ -0.6
TSKU-204ENST00000533752 ZNF492Q9P255 531 aa11.3□□□□□ -0.6
TSKU-204ENST00000533752 ALMS1Q8TCU4 4167 aa11.3□□□□□ -0.6
TSKU-204ENST00000533752 TRAV12-3A0A0B4J271 114 aa11.29□□□□□ -0.6
TSKU-204ENST00000533752 DIRC3C9JPN6 131 aa11.29□□□□□ -0.6
TSKU-204ENST00000533752 HMGB3O15347 200 aaKnown RBP11.29□□□□□ -0.6
TSKU-204ENST00000533752 EIF3GO75821 320 aaKnown RBP eCLIP11.29□□□□□ -0.6
TSKU-204ENST00000533752 LY6G6CO95867 125 aa11.29□□□□□ -0.6
TSKU-204ENST00000533752 CXorf1O96002 111 aa11.29□□□□□ -0.6
TSKU-204ENST00000533752 GPX1P07203 203 aa11.29□□□□□ -0.6
TSKU-204ENST00000533752 AKR1C8PQ5T2L2 129 aa11.29□□□□□ -0.6
TSKU-204ENST00000533752 KCNRGQ8N5I3 272 aa11.29□□□□□ -0.6
TSKU-204ENST00000533752 RNASE8Q8TDE3 154 aaKnown RBP11.29□□□□□ -0.6
TSKU-204ENST00000533752 TMED6Q8WW62 240 aa11.29□□□□□ -0.6
TSKU-204ENST00000533752 FAM210BQ96KR6 192 aa11.29□□□□□ -0.6
TSKU-204ENST00000533752 HYLS1Q96M11 299 aa11.29□□□□□ -0.6
TSKU-204ENST00000533752 ARPC5LQ9BPX5 153 aa11.29□□□□□ -0.6
TSKU-204ENST00000533752 TMEM167BQ9NRX6 74 aa11.29□□□□□ -0.6
TSKU-204ENST00000533752 IGHV4-4A0A075B6R2 117 aa11.28□□□□□ -0.6
TSKU-204ENST00000533752 A0A0D9SG52 128 aa11.28□□□□□ -0.6
TSKU-204ENST00000533752 PGPA6NDG6 321 aa11.28□□□□□ -0.6
TSKU-204ENST00000533752 AZU1P20160 251 aa11.28□□□□□ -0.6
TSKU-204ENST00000533752 GCHFRP30047 84 aa11.28□□□□□ -0.6
TSKU-204ENST00000533752 LGALS9CQ6DKI2 356 aa11.28□□□□□ -0.6
TSKU-204ENST00000533752 TIMM8BQ9Y5J9 83 aaPredicted RBP11.28□□□□□ -0.6
TSKU-204ENST00000533752 LENEPQ9Y5L5 61 aa11.28□□□□□ -0.6
TSKU-204ENST00000533752 CTXND1A0A1B0GTU2 59 aa11.27□□□□□ -0.61
TSKU-204ENST00000533752 SERTM2A0A1B0GWG4 89 aa11.27□□□□□ -0.61
TSKU-204ENST00000533752 PLAC8L1A1L4L8 177 aa11.27□□□□□ -0.61
TSKU-204ENST00000533752 PRM2P04554 102 aa11.27□□□□□ -0.61
TSKU-204ENST00000533752 RNASE4P34096 147 aaKnown RBP11.27□□□□□ -0.61
TSKU-204ENST00000533752 ZFAND2AQ8N6M9 145 aa11.27□□□□□ -0.61
TSKU-204ENST00000533752 ZNF680Q8NEM1 530 aa11.27□□□□□ -0.61
TSKU-204ENST00000533752 SUN5Q8TC36 379 aa11.27□□□□□ -0.61
TSKU-204ENST00000533752 ST6GAL2Q96JF0 529 aa11.27□□□□□ -0.61
TSKU-204ENST00000533752 LINC00467Q9BRT7 94 aa11.27□□□□□ -0.61
TSKU-204ENST00000533752 CYTL1Q9NRR1 136 aa11.27□□□□□ -0.61
TSKU-204ENST00000533752 SACSQ9NZJ4 4579 aa11.27□□□□□ -0.61
TSKU-204ENST00000533752 PLECQ15149 4684 aaKnown RBP11.26□□□□□ -0.61
TSKU-204ENST00000533752 KANTRA0A1W2PQU2 76 aa11.26□□□□□ -0.61
TSKU-204ENST00000533752 BTN1A1Q13410 526 aa11.26□□□□□ -0.61
TSKU-204ENST00000533752 C5orf17Q8NAS9 161 aa11.26□□□□□ -0.61
TSKU-204ENST00000533752 Q8TAT8 98 aa11.26□□□□□ -0.61
TSKU-204ENST00000533752 NDUFAF3Q9BU61 184 aa11.26□□□□□ -0.61
TSKU-204ENST00000533752 APLNQ9ULZ1 77 aa11.26□□□□□ -0.61
TSKU-204ENST00000533752 RYR3Q15413 4870 aa11.25□□□□□ -0.61
TSKU-204ENST00000533752 SNURFLB1AK76 121 aa11.25□□□□□ -0.61
TSKU-204ENST00000533752 EIF5AP63241 154 aaKnown RBP11.25□□□□□ -0.61
TSKU-204ENST00000533752 CD300CQ08708 224 aa11.25□□□□□ -0.61
TSKU-204ENST00000533752 IQCF2Q8IXL9 164 aa11.25□□□□□ -0.61
TSKU-204ENST00000533752 OR11H4Q8NGC9 324 aa11.25□□□□□ -0.61
TSKU-204ENST00000533752 RPH3ALQ9UNE2 315 aa11.25□□□□□ -0.61
TSKU-204ENST00000533752 K7EQM0 130 aa11.24□□□□□ -0.61
TSKU-204ENST00000533752 RGS13O14921 159 aa11.24□□□□□ -0.61
TSKU-204ENST00000533752 BCL2L11O43521 198 aa11.24□□□□□ -0.61
TSKU-204ENST00000533752 ZNF324O75467 553 aaPredicted RBP11.24□□□□□ -0.61
TSKU-204ENST00000533752 DEFB130BP0DP73 79 aa11.24□□□□□ -0.61
TSKU-204ENST00000533752 DEFB130AP0DP74 79 aa11.24□□□□□ -0.61
TSKU-204ENST00000533752 HTN3P15516 51 aa11.24□□□□□ -0.61
TSKU-204ENST00000533752 ANXA2RQ3ZCQ2 193 aa11.24□□□□□ -0.61
TSKU-204ENST00000533752 GOLT1AQ6ZVE7 132 aa11.24□□□□□ -0.61
TSKU-204ENST00000533752 EIF4E3Q8N5X7 224 aaKnown RBP11.24□□□□□ -0.61
TSKU-204ENST00000533752 NOP10Q9NPE3 64 aaKnown RBP11.24□□□□□ -0.61
TSKU-204ENST00000533752 CBY3A6NI87 242 aa11.23□□□□□ -0.61
TSKU-204ENST00000533752 PRR9Q5T870 116 aa11.23□□□□□ -0.61
TSKU-204ENST00000533752 SSX7Q7RTT5 188 aa11.23□□□□□ -0.61
TSKU-204ENST00000533752 ZNF471Q9BX82 626 aaPredicted RBP11.23□□□□□ -0.61
TSKU-204ENST00000533752 PLA2G2EQ9NZK7 142 aa11.23□□□□□ -0.61
TSKU-204ENST00000533752 DNAH1Q9P2D7 4330 aa11.22□□□□□ -0.61
TSKU-204ENST00000533752 A0A1W2PRE2 83 aa11.22□□□□□ -0.61
TSKU-204ENST00000533752 FBLL1A6NHQ2 334 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms