RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 DYNC2LI1Q8TCX1 351 aa7.86□□□□□ -1.15
CMTM1-216ENST00000533078 NTN5Q8WTR8 489 aaPredicted RBP7.86□□□□□ -1.15
CMTM1-216ENST00000533078 LINC00477Q96M19 166 aa7.86□□□□□ -1.15
CMTM1-216ENST00000533078 PFDN5Q99471 154 aa7.86□□□□□ -1.15
CMTM1-216ENST00000533078 VGLL1Q99990 258 aa7.86□□□□□ -1.15
CMTM1-216ENST00000533078 TMEM70Q9BUB7 260 aa7.86□□□□□ -1.15
CMTM1-216ENST00000533078 DNAJC4Q9NNZ3 241 aa7.86□□□□□ -1.15
CMTM1-216ENST00000533078 PRELID1Q9Y255 219 aa7.86□□□□□ -1.15
CMTM1-216ENST00000533078 DNAH8Q96JB1 4490 aa7.86□□□□□ -1.15
CMTM1-216ENST00000533078 C9orf170A2RU37 121 aa7.85□□□□□ -1.15
CMTM1-216ENST00000533078 CCNKO75909 580 aa7.85□□□□□ -1.15
CMTM1-216ENST00000533078 HIST1H1EP10412 219 aaKnown RBP7.85□□□□□ -1.15
CMTM1-216ENST00000533078 RNASE4P34096 147 aaKnown RBP7.85□□□□□ -1.15
CMTM1-216ENST00000533078 CAMLGP49069 296 aa7.85□□□□□ -1.15
CMTM1-216ENST00000533078 INPP1P49441 399 aa7.85□□□□□ -1.15
CMTM1-216ENST00000533078 CRYBA4P53673 196 aa7.85□□□□□ -1.15
CMTM1-216ENST00000533078 ZNF415Q09FC8 603 aa7.85□□□□□ -1.15
CMTM1-216ENST00000533078 TMEM78Q5T7P6 136 aa7.85□□□□□ -1.15
CMTM1-216ENST00000533078 TMEM37Q8WXS4 190 aa7.85□□□□□ -1.15
CMTM1-216ENST00000533078 SAT2Q96F10 170 aaPredicted RBP7.85□□□□□ -1.15
CMTM1-216ENST00000533078 C8orf49Q96NF6 230 aa7.85□□□□□ -1.15
CMTM1-216ENST00000533078 TXNDC17Q9BRA2 123 aa7.85□□□□□ -1.15
CMTM1-216ENST00000533078 AAMDCQ9H7C9 122 aa7.85□□□□□ -1.15
CMTM1-216ENST00000533078 KLF12Q9Y4X4 402 aa7.85□□□□□ -1.15
CMTM1-216ENST00000533078 TIMM9Q9Y5J7 89 aa7.85□□□□□ -1.15
CMTM1-216ENST00000533078 KLLNB2CW77 178 aa7.84□□□□□ -1.15
CMTM1-216ENST00000533078 E5RGE8 158 aa7.84□□□□□ -1.15
CMTM1-216ENST00000533078 H3BQ15 152 aa7.84□□□□□ -1.15
CMTM1-216ENST00000533078 L7N2F9 121 aa7.84□□□□□ -1.15
CMTM1-216ENST00000533078 PRAF2O60831 178 aa7.84□□□□□ -1.15
CMTM1-216ENST00000533078 ORM1P02763 201 aa7.84□□□□□ -1.15
CMTM1-216ENST00000533078 CRYGDP07320 174 aa7.84□□□□□ -1.15
CMTM1-216ENST00000533078 VAMP2P63027 116 aa7.84□□□□□ -1.15
CMTM1-216ENST00000533078 BTN1A1Q13410 526 aa7.84□□□□□ -1.15
CMTM1-216ENST00000533078 IAH1Q2TAA2 248 aaPredicted RBP7.84□□□□□ -1.15
CMTM1-216ENST00000533078 LINC00299Q6ZSB3 139 aa7.84□□□□□ -1.15
CMTM1-216ENST00000533078 TRIM63Q969Q1 353 aa7.84□□□□□ -1.15
CMTM1-216ENST00000533078 MGST2Q99735 147 aa7.84□□□□□ -1.15
CMTM1-216ENST00000533078 SOSTQ9BQB4 213 aa7.84□□□□□ -1.15
CMTM1-216ENST00000533078 MRPL16Q9NX20 251 aaKnown RBP7.84□□□□□ -1.15
CMTM1-216ENST00000533078 GSKIPQ9P0R6 139 aa7.84□□□□□ -1.15
CMTM1-216ENST00000533078 IGHV1OR15-1A0A075B7D0 117 aa7.83□□□□□ -1.16
CMTM1-216ENST00000533078 TRAV5A0A0B4J249 113 aa7.83□□□□□ -1.16
CMTM1-216ENST00000533078 CCDC160A6NGH7 325 aa7.83□□□□□ -1.16
CMTM1-216ENST00000533078 PLA2G1BP04054 148 aaKnown RBP7.83□□□□□ -1.16
CMTM1-216ENST00000533078 NMBP08949 121 aa7.83□□□□□ -1.16
CMTM1-216ENST00000533078 S100A5P33763 92 aa7.83□□□□□ -1.16
CMTM1-216ENST00000533078 ERCC8Q13216 396 aa7.83□□□□□ -1.16
CMTM1-216ENST00000533078 PDE6HQ13956 83 aa7.83□□□□□ -1.16
CMTM1-216ENST00000533078 MRPL32Q9BYC8 188 aaKnown RBP7.83□□□□□ -1.16
CMTM1-216ENST00000533078 SRRQ9GZT4 340 aa7.83□□□□□ -1.16
CMTM1-216ENST00000533078 BOLA1Q9Y3E2 137 aa7.83□□□□□ -1.16
CMTM1-216ENST00000533078 TRBV19A0A075B6N1 114 aa7.82□□□□□ -1.16
CMTM1-216ENST00000533078 C9JCJ5 164 aa7.82□□□□□ -1.16
CMTM1-216ENST00000533078 K7EQD1 137 aa7.82□□□□□ -1.16
CMTM1-216ENST00000533078 M0R3E3 92 aa7.82□□□□□ -1.16
CMTM1-216ENST00000533078 GYPEP15421 78 aa7.82□□□□□ -1.16
CMTM1-216ENST00000533078 BCAP31P51572 246 aa7.82□□□□□ -1.16
CMTM1-216ENST00000533078 HAMPP81172 84 aa7.82□□□□□ -1.16
CMTM1-216ENST00000533078 CD300CQ08708 224 aa7.82□□□□□ -1.16
CMTM1-216ENST00000533078 FHL2Q14192 279 aa7.82□□□□□ -1.16
CMTM1-216ENST00000533078 ZNF846Q147U1 533 aa7.82□□□□□ -1.16
CMTM1-216ENST00000533078 MORN5Q5VZ52 161 aa7.82□□□□□ -1.16
CMTM1-216ENST00000533078 SH2D6Q7Z4S9 175 aa7.82□□□□□ -1.16
CMTM1-216ENST00000533078 NRARPQ7Z6K4 114 aa7.82□□□□□ -1.16
CMTM1-216ENST00000533078 WFDC10BQ8IUB3 73 aa7.82□□□□□ -1.16
CMTM1-216ENST00000533078 SYT8Q8NBV8 401 aa7.82□□□□□ -1.16
CMTM1-216ENST00000533078 SLIRPQ9GZT3 109 aaKnown RBP7.82□□□□□ -1.16
CMTM1-216ENST00000533078 C20orf85Q9H1P6 137 aa7.82□□□□□ -1.16
CMTM1-216ENST00000533078 H3BMQ9 156 aa7.81□□□□□ -1.16
CMTM1-216ENST00000533078 CRISP2P16562 243 aa7.81□□□□□ -1.16
CMTM1-216ENST00000533078 MIC13Q5XKP0 118 aa7.81□□□□□ -1.16
CMTM1-216ENST00000533078 BLNKQ8WV28 456 aa7.81□□□□□ -1.16
CMTM1-216ENST00000533078 AGPAT4-IT1Q9H0P7 198 aa7.81□□□□□ -1.16
CMTM1-216ENST00000533078 GPN1Q9HCN4 374 aaPredicted RBP7.81□□□□□ -1.16
CMTM1-216ENST00000533078 UQCC1Q9NVA1 299 aa7.81□□□□□ -1.16
CMTM1-216ENST00000533078 C7orf66A4D0T2 115 aa7.8□□□□□ -1.16
CMTM1-216ENST00000533078 NAP1L6A6NFF2 107 aa7.8□□□□□ -1.16
CMTM1-216ENST00000533078 PVALBP20472 110 aaPredicted RBP7.8□□□□□ -1.16
CMTM1-216ENST00000533078 PPT1P50897 306 aa7.8□□□□□ -1.16
CMTM1-216ENST00000533078 CAV2P51636 162 aa7.8□□□□□ -1.16
CMTM1-216ENST00000533078 BAXQ07812 192 aa7.8□□□□□ -1.16
CMTM1-216ENST00000533078 TRIQKQ629K1 86 aa7.8□□□□□ -1.16
CMTM1-216ENST00000533078 C9orf47Q6ZRZ4 202 aa7.8□□□□□ -1.16
CMTM1-216ENST00000533078 FAM19A4Q96LR4 140 aa7.8□□□□□ -1.16
CMTM1-216ENST00000533078 TMEM14CQ9P0S9 112 aa7.8□□□□□ -1.16
CMTM1-216ENST00000533078 TP53TG3Q9ULZ0 132 aa7.8□□□□□ -1.16
CMTM1-216ENST00000533078 RCL1Q9Y2P8 373 aaKnown RBP7.8□□□□□ -1.16
CMTM1-216ENST00000533078 CENPXA8MT69 81 aa7.79□□□□□ -1.16
CMTM1-216ENST00000533078 NDUFB6O95139 128 aa7.79□□□□□ -1.16
CMTM1-216ENST00000533078 RPL29P47914 159 aaKnown RBP7.79□□□□□ -1.16
CMTM1-216ENST00000533078 ARL16Q0P5N6 197 aa7.79□□□□□ -1.16
CMTM1-216ENST00000533078 SERTAD4-AS1Q5TG53 156 aa7.79□□□□□ -1.16
CMTM1-216ENST00000533078 IQCF2Q8IXL9 164 aa7.79□□□□□ -1.16
CMTM1-216ENST00000533078 NHLRC2Q8NBF2 726 aa7.79□□□□□ -1.16
CMTM1-216ENST00000533078 OR10G4Q8NGN3 311 aa7.79□□□□□ -1.16
CMTM1-216ENST00000533078 SLC39A9Q9NUM3 307 aa7.79□□□□□ -1.16
CMTM1-216ENST00000533078 HMCN2Q8NDA2 5059 aa7.79□□□□□ -1.16
CMTM1-216ENST00000533078 UBR4Q5T4S7 5183 aa7.78□□□□□ -1.16
CMTM1-216ENST00000533078 TRGV11A0A075B6L2 103 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms