RNA–Protein interactions for RNA: ENST00000533064.1

TRIM3-212, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 1,654 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-212ENST00000533064 MRPL53Q96EL3 112 aaKnown RBP10.66□□□□□ -0.7
TRIM3-212ENST00000533064 AURKAIP1Q9NWT8 199 aaPredicted RBP10.66□□□□□ -0.7
TRIM3-212ENST00000533064 TMA7Q9Y2S6 64 aaKnown RBP10.66□□□□□ -0.7
TRIM3-212ENST00000533064 KLF12Q9Y4X4 402 aa10.66□□□□□ -0.7
TRIM3-212ENST00000533064 TRAV8-2A0A0B4J237 113 aa10.65□□□□□ -0.7
TRIM3-212ENST00000533064 K7EQM0 130 aa10.65□□□□□ -0.7
TRIM3-212ENST00000533064 HLA-DMBP28068 263 aa10.65□□□□□ -0.7
TRIM3-212ENST00000533064 TMEM183BQ1AE95 376 aa10.65□□□□□ -0.7
TRIM3-212ENST00000533064 ARL6IP6Q8N6S5 226 aa10.65□□□□□ -0.7
TRIM3-212ENST00000533064 LINC00479Q96M42 142 aa10.65□□□□□ -0.7
TRIM3-212ENST00000533064 CMYA5Q8N3K9 4069 aa10.65□□□□□ -0.7
TRIM3-212ENST00000533064 K7EN84 100 aa10.64□□□□□ -0.71
TRIM3-212ENST00000533064 M0R3E3 92 aa10.64□□□□□ -0.71
TRIM3-212ENST00000533064 PPP1R2P9O14990 202 aa10.64□□□□□ -0.71
TRIM3-212ENST00000533064 CMC4P56277 68 aaPredicted RBP10.64□□□□□ -0.71
TRIM3-212ENST00000533064 UBE2G1P62253 170 aa10.64□□□□□ -0.71
TRIM3-212ENST00000533064 PSMG4Q5JS54 123 aa10.64□□□□□ -0.71
TRIM3-212ENST00000533064 SFRP2Q96HF1 295 aa10.64□□□□□ -0.71
TRIM3-212ENST00000533064 FMC1Q96HJ9 113 aa10.64□□□□□ -0.71
TRIM3-212ENST00000533064 YPEL4Q96NS1 127 aa10.64□□□□□ -0.71
TRIM3-212ENST00000533064 TRAV34A0A0B4J273 112 aa10.63□□□□□ -0.71
TRIM3-212ENST00000533064 ZNF705FA8MVS1 300 aaPredicted RBP10.63□□□□□ -0.71
TRIM3-212ENST00000533064 H7BYZ3 331 aa10.63□□□□□ -0.71
TRIM3-212ENST00000533064 IGLV2-8P01709 118 aa10.63□□□□□ -0.71
TRIM3-212ENST00000533064 FAM24BQ8N5W8 94 aa10.63□□□□□ -0.71
TRIM3-212ENST00000533064 ZNF256Q9Y2P7 627 aaPredicted RBP10.63□□□□□ -0.71
TRIM3-212ENST00000533064 SERTM2A0A1B0GWG4 89 aa10.63□□□□□ -0.71
TRIM3-212ENST00000533064 DIRC3C9JPN6 131 aa10.63□□□□□ -0.71
TRIM3-212ENST00000533064 WIPF1O43516 503 aa10.63□□□□□ -0.71
TRIM3-212ENST00000533064 SMIM12Q96EX1 92 aa10.63□□□□□ -0.71
TRIM3-212ENST00000533064 C20orf173Q96LM9 149 aa10.63□□□□□ -0.71
TRIM3-212ENST00000533064 TRBV6-1A0A0K0K1D8 114 aa10.62□□□□□ -0.71
TRIM3-212ENST00000533064 GCGP01275 180 aa10.62□□□□□ -0.71
TRIM3-212ENST00000533064 ELOBQ15370 118 aa10.62□□□□□ -0.71
TRIM3-212ENST00000533064 GOLT1AQ6ZVE7 132 aa10.62□□□□□ -0.71
TRIM3-212ENST00000533064 GTSCR1Q86UQ5 136 aa10.62□□□□□ -0.71
TRIM3-212ENST00000533064 BAGE2Q86Y30 109 aa10.62□□□□□ -0.71
TRIM3-212ENST00000533064 OR11H12B2RN74 326 aa10.61□□□□□ -0.71
TRIM3-212ENST00000533064 DEFB131AP59861 70 aa10.61□□□□□ -0.71
TRIM3-212ENST00000533064 BEAN1Q3B7T3 259 aa10.61□□□□□ -0.71
TRIM3-212ENST00000533064 EBLN2Q6P2I7 272 aa10.61□□□□□ -0.71
TRIM3-212ENST00000533064 TMEM75Q8N9X5 138 aa10.61□□□□□ -0.71
TRIM3-212ENST00000533064 OR10G8Q8NGN5 311 aa10.61□□□□□ -0.71
TRIM3-212ENST00000533064 OR10J6PQ8NGY7 276 aa10.61□□□□□ -0.71
TRIM3-212ENST00000533064 MAP6D1Q9H9H5 199 aa10.61□□□□□ -0.71
TRIM3-212ENST00000533064 URGCP-MRPS24S4R325 110 aa10.61□□□□□ -0.71
TRIM3-212ENST00000533064 RBAKDNA6NC62 111 aa10.6□□□□□ -0.71
TRIM3-212ENST00000533064 LTAP01374 205 aa10.6□□□□□ -0.71
TRIM3-212ENST00000533064 OR5I1Q13606 314 aa10.6□□□□□ -0.71
TRIM3-212ENST00000533064 OXLD1Q5BKU9 147 aa10.6□□□□□ -0.71
TRIM3-212ENST00000533064 FAM110AQ9BQ89 295 aa10.6□□□□□ -0.71
TRIM3-212ENST00000533064 IGKV2-40A0A087WW87 121 aaPredicted RBP10.6□□□□□ -0.71
TRIM3-212ENST00000533064 IGKV2D-40P01614 121 aaPredicted RBP10.6□□□□□ -0.71
TRIM3-212ENST00000533064 IGLV2-11P01706 119 aa10.6□□□□□ -0.71
TRIM3-212ENST00000533064 PFN1P07737 140 aaKnown RBP10.6□□□□□ -0.71
TRIM3-212ENST00000533064 MGST1P10620 155 aaKnown RBP10.6□□□□□ -0.71
TRIM3-212ENST00000533064 S100PP25815 95 aa10.6□□□□□ -0.71
TRIM3-212ENST00000533064 TMEM78Q5T7P6 136 aa10.6□□□□□ -0.71
TRIM3-212ENST00000533064 Q86TA4 180 aa10.6□□□□□ -0.71
TRIM3-212ENST00000533064 IMMP2LQ96T52 175 aa10.6□□□□□ -0.71
TRIM3-212ENST00000533064 OSTCQ9NRP0 149 aa10.6□□□□□ -0.71
TRIM3-212ENST00000533064 FBLL1A6NHQ2 334 aaKnown RBP10.59□□□□□ -0.71
TRIM3-212ENST00000533064 PRAC2D3DTV9 90 aa10.59□□□□□ -0.71
TRIM3-212ENST00000533064 RAB5AP20339 215 aa10.59□□□□□ -0.71
TRIM3-212ENST00000533064 ERVFC1-1P60608 527 aa10.59□□□□□ -0.71
TRIM3-212ENST00000533064 HIST1H1AQ02539 215 aaPredicted RBP10.59□□□□□ -0.71
TRIM3-212ENST00000533064 ODF3L2Q3SX64 289 aa10.59□□□□□ -0.71
TRIM3-212ENST00000533064 FOXI2Q6ZQN5 318 aa10.59□□□□□ -0.71
TRIM3-212ENST00000533064 NHLRC2Q8NBF2 726 aa10.59□□□□□ -0.71
TRIM3-212ENST00000533064 OR8A1Q8NGG7 326 aa10.59□□□□□ -0.71
TRIM3-212ENST00000533064 SGK494Q96LW2 274 aa10.59□□□□□ -0.71
TRIM3-212ENST00000533064 MLST8Q9BVC4 326 aa10.59□□□□□ -0.71
TRIM3-212ENST00000533064 TRBV24-1A0A075B6N3 115 aa10.58□□□□□ -0.72
TRIM3-212ENST00000533064 CD7P09564 240 aa10.58□□□□□ -0.72
TRIM3-212ENST00000533064 PRB4P10163 310 aaPredicted RBP10.58□□□□□ -0.72
TRIM3-212ENST00000533064 FLI1Q01543 452 aaPredicted RBP10.58□□□□□ -0.72
TRIM3-212ENST00000533064 SAV1Q9H4B6 383 aaPredicted RBP10.58□□□□□ -0.72
TRIM3-212ENST00000533064 BIN3Q9NQY0 253 aa10.58□□□□□ -0.72
TRIM3-212ENST00000533064 TRAV8-1A0A0A6YYK1 113 aa10.57□□□□□ -0.72
TRIM3-212ENST00000533064 TGIF2-C20orf24A0A0A6YYL0 155 aa10.57□□□□□ -0.72
TRIM3-212ENST00000533064 F6UB75 175 aa10.57□□□□□ -0.72
TRIM3-212ENST00000533064 DUSP14O95147 198 aaKnown RBP10.57□□□□□ -0.72
TRIM3-212ENST00000533064 CXCL1P09341 107 aa10.57□□□□□ -0.72
TRIM3-212ENST00000533064 IBA57Q5T440 356 aaKnown RBP10.57□□□□□ -0.72
TRIM3-212ENST00000533064 KCNIP4Q6PIL6 250 aa10.57□□□□□ -0.72
TRIM3-212ENST00000533064 C9orf47Q6ZRZ4 202 aa10.57□□□□□ -0.72
TRIM3-212ENST00000533064 FAM231DQ6ZW35 169 aa10.57□□□□□ -0.72
TRIM3-212ENST00000533064 APRG1Q8IVJ8 170 aa10.57□□□□□ -0.72
TRIM3-212ENST00000533064 PPP1R14DQ9NXH3 145 aa10.57□□□□□ -0.72
TRIM3-212ENST00000533064 ZFP30Q9Y2G7 519 aa10.57□□□□□ -0.72
TRIM3-212ENST00000533064 A0A0J9YX75 114 aa10.57□□□□□ -0.72
TRIM3-212ENST00000533064 ZNF705DP0CH99 300 aaPredicted RBP10.57□□□□□ -0.72
TRIM3-212ENST00000533064 ZNF705BP0CI00 300 aaPredicted RBP10.57□□□□□ -0.72
TRIM3-212ENST00000533064 DEFB1P60022 68 aa10.57□□□□□ -0.72
TRIM3-212ENST00000533064 ACTL10Q5JWF8 245 aa10.57□□□□□ -0.72
TRIM3-212ENST00000533064 PRNTQ86SH4 94 aa10.57□□□□□ -0.72
TRIM3-212ENST00000533064 TMEM183AQ8IXX5 376 aa10.57□□□□□ -0.72
TRIM3-212ENST00000533064 LINC00477Q96M19 166 aa10.57□□□□□ -0.72
TRIM3-212ENST00000533064 VGLL1Q99990 258 aa10.57□□□□□ -0.72
TRIM3-212ENST00000533064 PYGO2Q9BRQ0 406 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms