RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 GAGE13Q4V321 117 aa7.39□□□□□ -1.23
BDNF-216ENST00000532997 PAPPA-AS1Q5QFB9 102 aa7.39□□□□□ -1.23
BDNF-216ENST00000532997 TMEM8BA6NDV4 472 aa7.38□□□□□ -1.23
BDNF-216ENST00000532997 F8W1H4 67 aa7.38□□□□□ -1.23
BDNF-216ENST00000532997 HOXB4P17483 251 aaPredicted RBP7.38□□□□□ -1.23
BDNF-216ENST00000532997 C16orf54Q6UWD8 224 aa7.38□□□□□ -1.23
BDNF-216ENST00000532997 ADAMTSL5Q6ZMM2 481 aa7.38□□□□□ -1.23
BDNF-216ENST00000532997 VKORC1Q9BQB6 163 aa7.38□□□□□ -1.23
BDNF-216ENST00000532997 PRUNE2Q8WUY3 3088 aa7.38□□□□□ -1.23
BDNF-216ENST00000532997 RAI1Q7Z5J4 1906 aaPredicted RBP7.38□□□□□ -1.23
BDNF-216ENST00000532997 A0A1B0GWB2 263 aa7.38□□□□□ -1.23
BDNF-216ENST00000532997 G3V4G9 280 aa7.38□□□□□ -1.23
BDNF-216ENST00000532997 NPBQ8NG41 125 aa7.38□□□□□ -1.23
BDNF-216ENST00000532997 LINC01560Q8TB33 94 aa7.38□□□□□ -1.23
BDNF-216ENST00000532997 VGLL1Q99990 258 aa7.38□□□□□ -1.23
BDNF-216ENST00000532997 CHTOPQ9Y3Y2 248 aaKnown RBP7.38□□□□□ -1.23
BDNF-216ENST00000532997 SAP30O75446 220 aa7.38□□□□□ -1.23
BDNF-216ENST00000532997 THBDP07204 575 aa7.38□□□□□ -1.23
BDNF-216ENST00000532997 ASIPP42127 132 aa7.38□□□□□ -1.23
BDNF-216ENST00000532997 ATP5G2Q06055 141 aa7.38□□□□□ -1.23
BDNF-216ENST00000532997 CEND1Q8N111 149 aa7.38□□□□□ -1.23
BDNF-216ENST00000532997 ZNF502Q8TBZ5 544 aa7.38□□□□□ -1.23
BDNF-216ENST00000532997 MRAP2Q96G30 205 aa7.38□□□□□ -1.23
BDNF-216ENST00000532997 NPFFR1Q9GZQ6 430 aa7.38□□□□□ -1.23
BDNF-216ENST00000532997 MRPL16Q9NX20 251 aaKnown RBP7.38□□□□□ -1.23
BDNF-216ENST00000532997 IGLV11-55A0A075B6I3 123 aa7.37□□□□□ -1.23
BDNF-216ENST00000532997 RBAKDNA6NC62 111 aa7.37□□□□□ -1.23
BDNF-216ENST00000532997 VMO1Q7Z5L0 202 aa7.37□□□□□ -1.23
BDNF-216ENST00000532997 KLK15Q9H2R5 256 aa7.37□□□□□ -1.23
BDNF-216ENST00000532997 VCX2Q9H322 139 aa7.37□□□□□ -1.23
BDNF-216ENST00000532997 IGHV3OR16-8A0A075B7F1 116 aa7.37□□□□□ -1.23
BDNF-216ENST00000532997 LOC107984156A0A0G2JMH3 177 aa7.37□□□□□ -1.23
BDNF-216ENST00000532997 HOXA3O43365 443 aaPredicted RBP7.37□□□□□ -1.23
BDNF-216ENST00000532997 DLX1P56177 255 aa7.37□□□□□ -1.23
BDNF-216ENST00000532997 LOXL1Q08397 574 aaPredicted RBP7.37□□□□□ -1.23
BDNF-216ENST00000532997 ARL17AQ8IVW1 177 aa7.37□□□□□ -1.23
BDNF-216ENST00000532997 SELENOKQ9Y6D0 94 aa7.37□□□□□ -1.23
BDNF-216ENST00000532997 TRAV40A0A0B4J280 105 aa7.37□□□□□ -1.23
BDNF-216ENST00000532997 TMEM238C9JI98 176 aa7.37□□□□□ -1.23
BDNF-216ENST00000532997 C15orf32Q32M92 178 aa7.37□□□□□ -1.23
BDNF-216ENST00000532997 OR11H6Q8NGC7 330 aa7.37□□□□□ -1.23
BDNF-216ENST00000532997 PTPRZ1P23471 2315 aaPredicted RBP7.36□□□□□ -1.23
BDNF-216ENST00000532997 J3KRW8 73 aa7.36□□□□□ -1.23
BDNF-216ENST00000532997 CLEC19AQ6UXS0 136 aa7.36□□□□□ -1.23
BDNF-216ENST00000532997 DTX2Q86UW9 622 aa7.36□□□□□ -1.23
BDNF-216ENST00000532997 TRAV21A0A0B4J279 112 aa7.36□□□□□ -1.23
BDNF-216ENST00000532997 F5H697 171 aa7.36□□□□□ -1.23
BDNF-216ENST00000532997 CCL21O00585 134 aa7.36□□□□□ -1.23
BDNF-216ENST00000532997 CRIP1P50238 77 aa7.36□□□□□ -1.23
BDNF-216ENST00000532997 KLRD1Q13241 179 aa7.36□□□□□ -1.23
BDNF-216ENST00000532997 FAM106AQ4KMX7 169 aa7.36□□□□□ -1.23
BDNF-216ENST00000532997 FAM110DQ8TAY7 271 aaPredicted RBP7.36□□□□□ -1.23
BDNF-216ENST00000532997 POLEQ07864 2286 aa7.36□□□□□ -1.23
BDNF-216ENST00000532997 TRBV25-1A0A075B6N4 114 aa7.36□□□□□ -1.23
BDNF-216ENST00000532997 M0R381 172 aa7.36□□□□□ -1.23
BDNF-216ENST00000532997 SCGB1A1P11684 91 aa7.36□□□□□ -1.23
BDNF-216ENST00000532997 IGFL4Q6B9Z1 124 aa7.36□□□□□ -1.23
BDNF-216ENST00000532997 IGHV3OR16-13A0A075B7E8 117 aa7.35□□□□□ -1.23
BDNF-216ENST00000532997 IGHV3-74A0A0B4J1X5 117 aa7.35□□□□□ -1.23
BDNF-216ENST00000532997 IGHV3-66A0A0C4DH42 116 aa7.35□□□□□ -1.23
BDNF-216ENST00000532997 HLA-DRB4P13762 266 aa7.35□□□□□ -1.23
BDNF-216ENST00000532997 ERCC8Q13216 396 aa7.35□□□□□ -1.23
BDNF-216ENST00000532997 ODF1Q14990 250 aa7.35□□□□□ -1.23
BDNF-216ENST00000532997 C9orf139Q6ZV77 190 aa7.35□□□□□ -1.23
BDNF-216ENST00000532997 PIFOQ8TCI5 191 aa7.35□□□□□ -1.23
BDNF-216ENST00000532997 MRPL35Q9NZE8 188 aaKnown RBP7.35□□□□□ -1.23
BDNF-216ENST00000532997 HLA-DRB4X5D2U9 266 aa7.35□□□□□ -1.23
BDNF-216ENST00000532997 A0A087WX48 190 aa7.35□□□□□ -1.23
BDNF-216ENST00000532997 IGLC6P0CF74 106 aa7.35□□□□□ -1.23
BDNF-216ENST00000532997 MRPL53Q96EL3 112 aaKnown RBP7.35□□□□□ -1.23
BDNF-216ENST00000532997 H3BVH4 76 aa7.35□□□□□ -1.23
BDNF-216ENST00000532997 TNFRSF13BO14836 293 aaPredicted RBP7.35□□□□□ -1.23
BDNF-216ENST00000532997 SMAGPQ0VAQ4 97 aa7.35□□□□□ -1.23
BDNF-216ENST00000532997 TRBV7-1A0A0A6YYK4 115 aa7.34□□□□□ -1.23
BDNF-216ENST00000532997 F8VRH5 84 aa7.34□□□□□ -1.23
BDNF-216ENST00000532997 OVOL1O14753 267 aa7.34□□□□□ -1.23
BDNF-216ENST00000532997 C22orf34Q6ZV56 151 aa7.34□□□□□ -1.23
BDNF-216ENST00000532997 IL17RELQ6ZVW7 336 aa7.34□□□□□ -1.23
BDNF-216ENST00000532997 KIR2DL4Q99706 377 aa7.34□□□□□ -1.23
BDNF-216ENST00000532997 DPH3P1Q9H4G8 78 aa7.34□□□□□ -1.23
BDNF-216ENST00000532997 FGF6P10767 208 aa7.34□□□□□ -1.23
BDNF-216ENST00000532997 CD300EQ496F6 205 aaPredicted RBP7.34□□□□□ -1.23
BDNF-216ENST00000532997 ZNF815PA8K554 130 aa7.34□□□□□ -1.23
BDNF-216ENST00000532997 K7EMI3 77 aa7.34□□□□□ -1.23
BDNF-216ENST00000532997 ID1P41134 155 aa7.34□□□□□ -1.23
BDNF-216ENST00000532997 FXYD2P54710 66 aa7.34□□□□□ -1.23
BDNF-216ENST00000532997 UFSP1Q6NVU6 142 aa7.34□□□□□ -1.23
BDNF-216ENST00000532997 LINC00477Q96M19 166 aa7.34□□□□□ -1.23
BDNF-216ENST00000532997 GTSF1LQ9H1H1 148 aa7.34□□□□□ -1.23
BDNF-216ENST00000532997 CYSLTR1Q9Y271 337 aa7.34□□□□□ -1.23
BDNF-216ENST00000532997 IGHV3-49A0A0A0MS15 119 aa7.33□□□□□ -1.24
BDNF-216ENST00000532997 APOMO95445 188 aa7.33□□□□□ -1.24
BDNF-216ENST00000532997 Q1RN00 199 aa7.33□□□□□ -1.24
BDNF-216ENST00000532997 RUSC1-AS1Q66K80 236 aa7.33□□□□□ -1.24
BDNF-216ENST00000532997 DYNAPQ8N1N2 210 aa7.33□□□□□ -1.24
BDNF-216ENST00000532997 DLX4Q92988 240 aaPredicted RBP7.33□□□□□ -1.24
BDNF-216ENST00000532997 SMIM2Q9BVW6 85 aa7.33□□□□□ -1.24
BDNF-216ENST00000532997 PSMB2P49721 201 aa7.33□□□□□ -1.24
BDNF-216ENST00000532997 FANCD2OSQ96PS1 177 aa7.33□□□□□ -1.24
BDNF-216ENST00000532997 ABCA4P78363 2273 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms