RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 OTORQ9NRC9 128 aa9.96□□□□□ -0.82
TSPAN4-220ENST00000532375 ZNF492Q9P255 531 aa9.96□□□□□ -0.82
TSPAN4-220ENST00000532375 ALMS1Q8TCU4 4167 aa9.96□□□□□ -0.82
TSPAN4-220ENST00000532375 VPS13DQ5THJ4 4388 aa9.96□□□□□ -0.82
TSPAN4-220ENST00000532375 LOC102723971A0A1B0GUV8 181 aa9.95□□□□□ -0.82
TSPAN4-220ENST00000532375 PGPA6NDG6 321 aa9.95□□□□□ -0.82
TSPAN4-220ENST00000532375 DIRC3C9JPN6 131 aa9.95□□□□□ -0.82
TSPAN4-220ENST00000532375 GCHFRP30047 84 aa9.95□□□□□ -0.82
TSPAN4-220ENST00000532375 TSPOP30536 169 aa9.95□□□□□ -0.82
TSPAN4-220ENST00000532375 RRN3P1Q2M238 152 aa9.95□□□□□ -0.82
TSPAN4-220ENST00000532375 LGALSLQ3ZCW2 172 aaPredicted RBP9.95□□□□□ -0.82
TSPAN4-220ENST00000532375 TMEM256Q8N2U0 113 aa9.95□□□□□ -0.82
TSPAN4-220ENST00000532375 ZFAND2AQ8N6M9 145 aa9.95□□□□□ -0.82
TSPAN4-220ENST00000532375 C20orf144Q9BQM9 153 aa9.95□□□□□ -0.82
TSPAN4-220ENST00000532375 PPP1R14DQ9NXH3 145 aa9.95□□□□□ -0.82
TSPAN4-220ENST00000532375 DKK2Q9UBU2 259 aa9.95□□□□□ -0.82
TSPAN4-220ENST00000532375 TMEM189A5PLL7 270 aa9.94□□□□□ -0.82
TSPAN4-220ENST00000532375 RBAKDNA6NC62 111 aa9.94□□□□□ -0.82
TSPAN4-220ENST00000532375 NUPR2A6NF83 97 aa9.94□□□□□ -0.82
TSPAN4-220ENST00000532375 BCL2L11O43521 198 aa9.94□□□□□ -0.82
TSPAN4-220ENST00000532375 ZNF324O75467 553 aaPredicted RBP9.94□□□□□ -0.82
TSPAN4-220ENST00000532375 SLC25A5P05141 298 aaKnown RBP9.94□□□□□ -0.82
TSPAN4-220ENST00000532375 NMBP08949 121 aa9.94□□□□□ -0.82
TSPAN4-220ENST00000532375 LEPP41159 167 aa9.94□□□□□ -0.82
TSPAN4-220ENST00000532375 TAS2R60P59551 318 aa9.94□□□□□ -0.82
TSPAN4-220ENST00000532375 CD300CQ08708 224 aa9.94□□□□□ -0.82
TSPAN4-220ENST00000532375 PRR9Q5T870 116 aa9.94□□□□□ -0.82
TSPAN4-220ENST00000532375 Q6ZTC4 211 aa9.94□□□□□ -0.82
TSPAN4-220ENST00000532375 TMUB2Q71RG4 321 aa9.94□□□□□ -0.82
TSPAN4-220ENST00000532375 ZNF767PQ75MW2 155 aa9.94□□□□□ -0.82
TSPAN4-220ENST00000532375 ARL6IP6Q8N6S5 226 aa9.94□□□□□ -0.82
TSPAN4-220ENST00000532375 LINC01587Q99440 93 aa9.94□□□□□ -0.82
TSPAN4-220ENST00000532375 TMEM208Q9BTX3 173 aa9.94□□□□□ -0.82
TSPAN4-220ENST00000532375 LCE6AA0A183 80 aa9.93□□□□□ -0.82
TSPAN4-220ENST00000532375 CTXND1A0A1B0GTU2 59 aa9.93□□□□□ -0.82
TSPAN4-220ENST00000532375 H7BYZ3 331 aa9.93□□□□□ -0.82
TSPAN4-220ENST00000532375 CXorf1O96002 111 aa9.93□□□□□ -0.82
TSPAN4-220ENST00000532375 EMP1P54849 157 aa9.93□□□□□ -0.82
TSPAN4-220ENST00000532375 FAM222AQ5U5X8 452 aa9.93□□□□□ -0.82
TSPAN4-220ENST00000532375 Q6ZQT7 251 aa9.93□□□□□ -0.82
TSPAN4-220ENST00000532375 RXFP4Q8TDU9 374 aa9.93□□□□□ -0.82
TSPAN4-220ENST00000532375 YTHDF2Q9Y5A9 579 aaKnown RBP9.93□□□□□ -0.82
TSPAN4-220ENST00000532375 TRAV12-3A0A0B4J271 114 aa9.92□□□□□ -0.82
TSPAN4-220ENST00000532375 TRBV7-9A0A0J9YWB2 115 aa9.92□□□□□ -0.82
TSPAN4-220ENST00000532375 A0A1B0GVG6 124 aa9.92□□□□□ -0.82
TSPAN4-220ENST00000532375 J3KRW8 73 aa9.92□□□□□ -0.82
TSPAN4-220ENST00000532375 C1QBP02746 253 aa9.92□□□□□ -0.82
TSPAN4-220ENST00000532375 SEC11BP0C7V7 166 aa9.92□□□□□ -0.82
TSPAN4-220ENST00000532375 SPART-AS1P0CW21 52 aa9.92□□□□□ -0.82
TSPAN4-220ENST00000532375 FHITP49789 147 aa9.92□□□□□ -0.82
TSPAN4-220ENST00000532375 ZNF138P52744 262 aa9.92□□□□□ -0.82
TSPAN4-220ENST00000532375 Q8TAT8 98 aa9.92□□□□□ -0.82
TSPAN4-220ENST00000532375 RNASE8Q8TDE3 154 aaKnown RBP9.92□□□□□ -0.82
TSPAN4-220ENST00000532375 TMPRSS5Q9H3S3 457 aa9.92□□□□□ -0.82
TSPAN4-220ENST00000532375 C7orf71A4D174 169 aa9.91□□□□□ -0.82
TSPAN4-220ENST00000532375 CSN1S1P47710 185 aa9.91□□□□□ -0.82
TSPAN4-220ENST00000532375 BTN1A1Q13410 526 aa9.91□□□□□ -0.82
TSPAN4-220ENST00000532375 AKR1C8PQ5T2L2 129 aa9.91□□□□□ -0.82
TSPAN4-220ENST00000532375 TMEM78Q5T7P6 136 aa9.91□□□□□ -0.82
TSPAN4-220ENST00000532375 TMED6Q8WW62 240 aa9.91□□□□□ -0.82
TSPAN4-220ENST00000532375 TVP23CQ96ET8 276 aa9.91□□□□□ -0.82
TSPAN4-220ENST00000532375 HYLS1Q96M11 299 aa9.91□□□□□ -0.82
TSPAN4-220ENST00000532375 ZNF471Q9BX82 626 aaPredicted RBP9.91□□□□□ -0.82
TSPAN4-220ENST00000532375 TMEM167BQ9NRX6 74 aa9.91□□□□□ -0.82
TSPAN4-220ENST00000532375 hCG_2014768A0A024R1R8 64 aa9.9□□□□□ -0.82
TSPAN4-220ENST00000532375 KANTRA0A1W2PQU2 76 aa9.9□□□□□ -0.82
TSPAN4-220ENST00000532375 A0A1W2PRE2 83 aa9.9□□□□□ -0.82
TSPAN4-220ENST00000532375 GGTLC3B5MD39 225 aa9.9□□□□□ -0.82
TSPAN4-220ENST00000532375 C11orf94C9JXX5 98 aa9.9□□□□□ -0.82
TSPAN4-220ENST00000532375 SUMO1P63165 101 aaKnown RBP9.9□□□□□ -0.82
TSPAN4-220ENST00000532375 GNG5P63218 68 aa9.9□□□□□ -0.82
TSPAN4-220ENST00000532375 STOML3Q8TAV4 291 aa9.9□□□□□ -0.82
TSPAN4-220ENST00000532375 LINC00467Q9BRT7 94 aa9.9□□□□□ -0.82
TSPAN4-220ENST00000532375 KLK5Q9Y337 293 aaPredicted RBP9.9□□□□□ -0.82
TSPAN4-220ENST00000532375 LENEPQ9Y5L5 61 aa9.9□□□□□ -0.82
TSPAN4-220ENST00000532375 TRAV8-1A0A0A6YYK1 113 aa9.89□□□□□ -0.83
TSPAN4-220ENST00000532375 TRAV10A0A0B4J240 114 aa9.89□□□□□ -0.83
TSPAN4-220ENST00000532375 IGLV2-11P01706 119 aa9.89□□□□□ -0.83
TSPAN4-220ENST00000532375 TCRAP04437 139 aa9.89□□□□□ -0.83
TSPAN4-220ENST00000532375 GPX1P07203 203 aa9.89□□□□□ -0.83
TSPAN4-220ENST00000532375 HTN1P15515 57 aa9.89□□□□□ -0.83
TSPAN4-220ENST00000532375 RNASE4P34096 147 aaKnown RBP9.89□□□□□ -0.83
TSPAN4-220ENST00000532375 FGF8P55075 233 aaPredicted RBP9.89□□□□□ -0.83
TSPAN4-220ENST00000532375 ZNF493Q6ZR52 646 aa9.89□□□□□ -0.83
TSPAN4-220ENST00000532375 GOLT1AQ6ZVE7 132 aa9.89□□□□□ -0.83
TSPAN4-220ENST00000532375 TMEM263Q8WUH6 116 aaKnown RBP9.89□□□□□ -0.83
TSPAN4-220ENST00000532375 MBD3L1Q8WWY6 194 aa9.89□□□□□ -0.83
TSPAN4-220ENST00000532375 PYGO2Q9BRQ0 406 aa9.89□□□□□ -0.83
TSPAN4-220ENST00000532375 NIPSNAP3BQ9BS92 247 aa9.89□□□□□ -0.83
TSPAN4-220ENST00000532375 MAP1LC3B2A6NCE7 125 aa9.88□□□□□ -0.83
TSPAN4-220ENST00000532375 LYRM9A8MSI8 78 aa9.88□□□□□ -0.83
TSPAN4-220ENST00000532375 FAM74A1Q5RGS3 127 aa9.88□□□□□ -0.83
TSPAN4-220ENST00000532375 LINC00612Q8N6U2 182 aa9.88□□□□□ -0.83
TSPAN4-220ENST00000532375 C5orf17Q8NAS9 161 aa9.88□□□□□ -0.83
TSPAN4-220ENST00000532375 CMTM2Q8TAZ6 248 aa9.88□□□□□ -0.83
TSPAN4-220ENST00000532375 C2CD4CQ8TF44 421 aa9.88□□□□□ -0.83
TSPAN4-220ENST00000532375 C16orf74Q96GX8 76 aa9.88□□□□□ -0.83
TSPAN4-220ENST00000532375 MAP1LC3BQ9GZQ8 125 aa9.88□□□□□ -0.83
TSPAN4-220ENST00000532375 APLNQ9ULZ1 77 aa9.88□□□□□ -0.83
TSPAN4-220ENST00000532375 EPDR1Q9UM22 224 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms