RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 HSD52Q0P140 79 aa8.97□□□□□ -0.97
PTPRK-221ENST00000532331 DOCK10Q96BY6 2186 aa8.97□□□□□ -0.97
PTPRK-221ENST00000532331 CLPSL1A2RUU4 121 aa8.97□□□□□ -0.97
PTPRK-221ENST00000532331 LHBP01229 141 aa8.97□□□□□ -0.97
PTPRK-221ENST00000532331 TPSG1Q9NRR2 321 aa8.97□□□□□ -0.97
PTPRK-221ENST00000532331 DENND4CQ5VZ89 1909 aa8.97□□□□□ -0.97
PTPRK-221ENST00000532331 HOXD3P31249 432 aaPredicted RBP8.97□□□□□ -0.97
PTPRK-221ENST00000532331 PRR31Q5SQ13 230 aa8.97□□□□□ -0.97
PTPRK-221ENST00000532331 SFTA2Q6UW10 78 aa8.97□□□□□ -0.97
PTPRK-221ENST00000532331 C11orf53Q8IXP5 236 aa8.97□□□□□ -0.97
PTPRK-221ENST00000532331 C11orf68Q9H3H3 251 aaKnown RBP8.97□□□□□ -0.97
PTPRK-221ENST00000532331 LIME1Q9H400 295 aa8.97□□□□□ -0.97
PTPRK-221ENST00000532331 A0A087WWL8 130 aa8.97□□□□□ -0.97
PTPRK-221ENST00000532331 ARMS2P0C7Q2 107 aa8.97□□□□□ -0.97
PTPRK-221ENST00000532331 HIST2H2BCQ6DN03 193 aa8.97□□□□□ -0.97
PTPRK-221ENST00000532331 DEFB136Q30KP8 78 aa8.97□□□□□ -0.97
PTPRK-221ENST00000532331 MTURNQ8N3F0 131 aa8.97□□□□□ -0.97
PTPRK-221ENST00000532331 DEFB104AQ8WTQ1 72 aa8.97□□□□□ -0.97
PTPRK-221ENST00000532331 C1orf159Q96HA4 380 aa8.97□□□□□ -0.97
PTPRK-221ENST00000532331 ZNF134P52741 427 aa8.96□□□□□ -0.97
PTPRK-221ENST00000532331 RSPO3Q9BXY4 272 aaPredicted RBP8.96□□□□□ -0.97
PTPRK-221ENST00000532331 NOTCH2Q04721 2471 aa8.96□□□□□ -0.97
PTPRK-221ENST00000532331 IGHV7-4-1A0A0J9YVY3 117 aa8.96□□□□□ -0.97
PTPRK-221ENST00000532331 M0R2P5 195 aa8.96□□□□□ -0.97
PTPRK-221ENST00000532331 CFHR3Q02985 330 aa8.96□□□□□ -0.97
PTPRK-221ENST00000532331 FAM90A2PQ658T7 463 aa8.96□□□□□ -0.98
PTPRK-221ENST00000532331 ACACBO00763 2458 aa8.96□□□□□ -0.98
PTPRK-221ENST00000532331 CADP27708 2225 aa8.96□□□□□ -0.98
PTPRK-221ENST00000532331 AMN1Q8IY45 258 aa8.96□□□□□ -0.98
PTPRK-221ENST00000532331 WFDC11Q8NEX6 87 aa8.96□□□□□ -0.98
PTPRK-221ENST00000532331 OR2K2Q8NGT1 345 aa8.96□□□□□ -0.98
PTPRK-221ENST00000532331 LINC00479Q96M42 142 aa8.96□□□□□ -0.98
PTPRK-221ENST00000532331 JPT2Q9H910 190 aa8.96□□□□□ -0.98
PTPRK-221ENST00000532331 KNCNA6PVL3 124 aa8.95□□□□□ -0.98
PTPRK-221ENST00000532331 GP9P14770 177 aa8.95□□□□□ -0.98
PTPRK-221ENST00000532331 ZNF492Q9P255 531 aa8.95□□□□□ -0.98
PTPRK-221ENST00000532331 PIEZO1Q92508 2521 aa8.95□□□□□ -0.98
PTPRK-221ENST00000532331 PRSS57Q6UWY2 283 aa8.95□□□□□ -0.98
PTPRK-221ENST00000532331 ERG28Q9UKR5 140 aa8.95□□□□□ -0.98
PTPRK-221ENST00000532331 HEATR5AQ86XA9 2040 aa8.95□□□□□ -0.98
PTPRK-221ENST00000532331 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.95□□□□□ -0.98
PTPRK-221ENST00000532331 DMRTA1Q5VZB9 504 aa8.95□□□□□ -0.98
PTPRK-221ENST00000532331 TRBV19A0A075B6N1 114 aa8.95□□□□□ -0.98
PTPRK-221ENST00000532331 TRPT1Q86TN4 253 aaKnown RBP8.95□□□□□ -0.98
PTPRK-221ENST00000532331 PHLDA1Q8WV24 401 aaPredicted RBP8.95□□□□□ -0.98
PTPRK-221ENST00000532331 CST9LQ9H4G1 147 aa8.95□□□□□ -0.98
PTPRK-221ENST00000532331 GGTLC3B5MD39 225 aa8.95□□□□□ -0.98
PTPRK-221ENST00000532331 IGLV3-1P01715 115 aa8.95□□□□□ -0.98
PTPRK-221ENST00000532331 C6orf226Q5I0X4 101 aa8.95□□□□□ -0.98
PTPRK-221ENST00000532331 FNDC4Q9H6D8 234 aaPredicted RBP8.95□□□□□ -0.98
PTPRK-221ENST00000532331 RHODO00212 210 aa8.94□□□□□ -0.98
PTPRK-221ENST00000532331 SMKR1H3BMG3 65 aa8.94□□□□□ -0.98
PTPRK-221ENST00000532331 PAX4O43316 350 aa8.94□□□□□ -0.98
PTPRK-221ENST00000532331 PFN1P07737 140 aaKnown RBP8.94□□□□□ -0.98
PTPRK-221ENST00000532331 BLCAPP62952 87 aa8.94□□□□□ -0.98
PTPRK-221ENST00000532331 TRAV8-2A0A0B4J237 113 aa8.94□□□□□ -0.98
PTPRK-221ENST00000532331 INAFM1C9JVW0 142 aa8.94□□□□□ -0.98
PTPRK-221ENST00000532331 CD5LO43866 347 aa8.94□□□□□ -0.98
PTPRK-221ENST00000532331 SS18Q15532 418 aa8.94□□□□□ -0.98
PTPRK-221ENST00000532331 IGKV1-39P01597 117 aa8.94□□□□□ -0.98
PTPRK-221ENST00000532331 IGKV1D-39P04432 117 aa8.94□□□□□ -0.98
PTPRK-221ENST00000532331 ZFP36P26651 326 aaKnown RBP8.94□□□□□ -0.98
PTPRK-221ENST00000532331 PAX9P55771 341 aa8.94□□□□□ -0.98
PTPRK-221ENST00000532331 ZNF479Q96JC4 524 aa8.94□□□□□ -0.98
PTPRK-221ENST00000532331 GAGE12BA1L429 117 aa8.93□□□□□ -0.98
PTPRK-221ENST00000532331 GAGE7O76087 117 aa8.93□□□□□ -0.98
PTPRK-221ENST00000532331 GAGE12FP0CL80 117 aa8.93□□□□□ -0.98
PTPRK-221ENST00000532331 GAGE12GP0CL81 117 aa8.93□□□□□ -0.98
PTPRK-221ENST00000532331 GAGE12IP0CL82 117 aa8.93□□□□□ -0.98
PTPRK-221ENST00000532331 TMEM256Q8N2U0 113 aa8.93□□□□□ -0.98
PTPRK-221ENST00000532331 TRAV13-1A0A0B4J241 112 aa8.93□□□□□ -0.98
PTPRK-221ENST00000532331 FAM231BA6NCW3 169 aa8.93□□□□□ -0.98
PTPRK-221ENST00000532331 AZU1P20160 251 aa8.93□□□□□ -0.98
PTPRK-221ENST00000532331 WT1-ASQ06250 92 aa8.93□□□□□ -0.98
PTPRK-221ENST00000532331 KLK9Q9UKQ9 250 aa8.93□□□□□ -0.98
PTPRK-221ENST00000532331 SLURP1P55000 103 aa8.93□□□□□ -0.98
PTPRK-221ENST00000532331 ATXN8Q156A1 80 aa8.93□□□□□ -0.98
PTPRK-221ENST00000532331 LY6G5BQ8NDX9 201 aa8.93□□□□□ -0.98
PTPRK-221ENST00000532331 TNFRSF6BO95407 300 aa8.92□□□□□ -0.98
PTPRK-221ENST00000532331 CDKN1BP46527 198 aa8.92□□□□□ -0.98
PTPRK-221ENST00000532331 H3BRN7 92 aa8.92□□□□□ -0.98
PTPRK-221ENST00000532331 NPC2P61916 151 aa8.92□□□□□ -0.98
PTPRK-221ENST00000532331 GUSBP1Q15486 140 aa8.92□□□□□ -0.98
PTPRK-221ENST00000532331 C8orf49Q96NF6 230 aa8.92□□□□□ -0.98
PTPRK-221ENST00000532331 MYCNOSP40205 109 aa8.92□□□□□ -0.98
PTPRK-221ENST00000532331 DNAJC9-AS1A6NH13 148 aa8.92□□□□□ -0.98
PTPRK-221ENST00000532331 SYS1-DBNDD2H3BUS1 97 aa8.92□□□□□ -0.98
PTPRK-221ENST00000532331 CT83Q5H943 113 aa8.92□□□□□ -0.98
PTPRK-221ENST00000532331 TMEM14CQ9P0S9 112 aa8.92□□□□□ -0.98
PTPRK-221ENST00000532331 MYMXA0A1B0GTQ4 84 aa8.92□□□□□ -0.98
PTPRK-221ENST00000532331 C3orf79P0CE67 100 aa8.92□□□□□ -0.98
PTPRK-221ENST00000532331 IGFBPL1Q8WX77 278 aa8.92□□□□□ -0.98
PTPRK-221ENST00000532331 PRSS46E5RG02 174 aa8.91□□□□□ -0.98
PTPRK-221ENST00000532331 IGHV1OR15-1A0A075B7D0 117 aa8.91□□□□□ -0.98
PTPRK-221ENST00000532331 SAMD5Q5TGI4 173 aa8.91□□□□□ -0.98
PTPRK-221ENST00000532331 MALRD1Q5VYJ5 2156 aa8.91□□□□□ -0.98
PTPRK-221ENST00000532331 A8MWV9 139 aa8.91□□□□□ -0.98
PTPRK-221ENST00000532331 IGHV4-31P0DP07 118 aa8.91□□□□□ -0.98
PTPRK-221ENST00000532331 TIMM21Q9BVV7 248 aa8.91□□□□□ -0.98
PTPRK-221ENST00000532331 RMI2Q96E14 147 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms