RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 AAMDCQ9H7C9 122 aa10.57□□□□□ -0.72
CPSF1-206ENST00000531480 U3KQK5 164 aa10.57□□□□□ -0.72
CPSF1-206ENST00000531480 ZNF705FA8MVS1 300 aaPredicted RBP10.56□□□□□ -0.72
CPSF1-206ENST00000531480 C11orf94C9JXX5 98 aa10.56□□□□□ -0.72
CPSF1-206ENST00000531480 CSN1S1P47710 185 aa10.56□□□□□ -0.72
CPSF1-206ENST00000531480 CNN1P51911 297 aaKnown RBP10.56□□□□□ -0.72
CPSF1-206ENST00000531480 NUTF2P61970 127 aaKnown RBP10.56□□□□□ -0.72
CPSF1-206ENST00000531480 SOHLH1Q5JUK2 328 aa10.56□□□□□ -0.72
CPSF1-206ENST00000531480 ARL6IP6Q8N6S5 226 aa10.56□□□□□ -0.72
CPSF1-206ENST00000531480 CMTM2Q8TAZ6 248 aa10.56□□□□□ -0.72
CPSF1-206ENST00000531480 RXFP4Q8TDU9 374 aa10.56□□□□□ -0.72
CPSF1-206ENST00000531480 RCHY1Q96PM5 261 aa10.56□□□□□ -0.72
CPSF1-206ENST00000531480 TMEM218A2RU14 115 aa10.55□□□□□ -0.72
CPSF1-206ENST00000531480 FBLL1A6NHQ2 334 aaKnown RBP10.55□□□□□ -0.72
CPSF1-206ENST00000531480 PRAC2D3DTV9 90 aa10.55□□□□□ -0.72
CPSF1-206ENST00000531480 M0R3E3 92 aa10.55□□□□□ -0.72
CPSF1-206ENST00000531480 PAGE4O60829 102 aa10.55□□□□□ -0.72
CPSF1-206ENST00000531480 CA1P00915 261 aaPredicted RBP10.55□□□□□ -0.72
CPSF1-206ENST00000531480 CCL20P78556 96 aa10.55□□□□□ -0.72
CPSF1-206ENST00000531480 DEFB135Q30KP9 77 aa10.55□□□□□ -0.72
CPSF1-206ENST00000531480 EXOC3-AS1Q8N2X6 119 aa10.55□□□□□ -0.72
CPSF1-206ENST00000531480 HIST1H2BAQ96A08 127 aa10.55□□□□□ -0.72
CPSF1-206ENST00000531480 C1QTNF4Q9BXJ3 329 aa10.55□□□□□ -0.72
CPSF1-206ENST00000531480 SEC11CQ9BY50 192 aa10.55□□□□□ -0.72
CPSF1-206ENST00000531480 RETNQ9HD89 108 aa10.55□□□□□ -0.72
CPSF1-206ENST00000531480 SERTM2A0A1B0GWG4 89 aa10.54□□□□□ -0.72
CPSF1-206ENST00000531480 NPIPB6E9PJ23 425 aa10.54□□□□□ -0.72
CPSF1-206ENST00000531480 F8W036 122 aa10.54□□□□□ -0.72
CPSF1-206ENST00000531480 SPRY2O43597 315 aa10.54□□□□□ -0.72
CPSF1-206ENST00000531480 ATP6V1G1O75348 118 aa10.54□□□□□ -0.72
CPSF1-206ENST00000531480 ICAM4Q14773 271 aa10.54□□□□□ -0.72
CPSF1-206ENST00000531480 OR4B1Q8NGF8 309 aa10.54□□□□□ -0.72
CPSF1-206ENST00000531480 Q9H3A6 140 aa10.54□□□□□ -0.72
CPSF1-206ENST00000531480 OTORQ9NRC9 128 aa10.54□□□□□ -0.72
CPSF1-206ENST00000531480 FAM74A7A6NL05 159 aa10.53□□□□□ -0.72
CPSF1-206ENST00000531480 ZNF705DP0CH99 300 aaPredicted RBP10.53□□□□□ -0.72
CPSF1-206ENST00000531480 ZNF705BP0CI00 300 aaPredicted RBP10.53□□□□□ -0.72
CPSF1-206ENST00000531480 RANP62826 216 aaKnown RBP10.53□□□□□ -0.72
CPSF1-206ENST00000531480 ODF3Q96PU9 254 aa10.53□□□□□ -0.72
CPSF1-206ENST00000531480 NIPSNAP3BQ9BS92 247 aa10.53□□□□□ -0.72
CPSF1-206ENST00000531480 TMPRSS5Q9H3S3 457 aa10.53□□□□□ -0.72
CPSF1-206ENST00000531480 CRXO43186 299 aaPredicted RBP10.52□□□□□ -0.73
CPSF1-206ENST00000531480 AMBPP02760 352 aa10.52□□□□□ -0.73
CPSF1-206ENST00000531480 SFTA3P0C7M3 94 aa10.52□□□□□ -0.73
CPSF1-206ENST00000531480 UBE2G2P60604 165 aa10.52□□□□□ -0.73
CPSF1-206ENST00000531480 HIST1H1AQ02539 215 aaPredicted RBP10.52□□□□□ -0.73
CPSF1-206ENST00000531480 C9orf47Q6ZRZ4 202 aa10.52□□□□□ -0.73
CPSF1-206ENST00000531480 SVBPQ8N300 66 aa10.52□□□□□ -0.73
CPSF1-206ENST00000531480 C5orf17Q8NAS9 161 aa10.52□□□□□ -0.73
CPSF1-206ENST00000531480 FAM19A4Q96LR4 140 aa10.52□□□□□ -0.73
CPSF1-206ENST00000531480 RARRES2Q99969 163 aa10.52□□□□□ -0.73
CPSF1-206ENST00000531480 EDA2RQ9HAV5 297 aa10.52□□□□□ -0.73
CPSF1-206ENST00000531480 RBAKDNA6NC62 111 aa10.51□□□□□ -0.73
CPSF1-206ENST00000531480 IGKV3-20P01619 116 aa10.51□□□□□ -0.73
CPSF1-206ENST00000531480 SLC25A5P05141 298 aaKnown RBP10.51□□□□□ -0.73
CPSF1-206ENST00000531480 SUMO1P63165 101 aaKnown RBP10.51□□□□□ -0.73
CPSF1-206ENST00000531480 PNRC1Q12796 327 aaPredicted RBP10.51□□□□□ -0.73
CPSF1-206ENST00000531480 ZNF705AQ6ZN79 300 aaPredicted RBP10.51□□□□□ -0.73
CPSF1-206ENST00000531480 OR10J6PQ8NGY7 276 aa10.51□□□□□ -0.73
CPSF1-206ENST00000531480 BIN3Q9NQY0 253 aa10.51□□□□□ -0.73
CPSF1-206ENST00000531480 PPP1R14DQ9NXH3 145 aa10.51□□□□□ -0.73
CPSF1-206ENST00000531480 KMT2CQ8NEZ4 4911 aaKnown RBP10.5□□□□□ -0.73
CPSF1-206ENST00000531480 PGPA6NDG6 321 aa10.5□□□□□ -0.73
CPSF1-206ENST00000531480 SNAPINO95295 136 aa10.5□□□□□ -0.73
CPSF1-206ENST00000531480 SRP19P09132 144 aaKnown RBP10.5□□□□□ -0.73
CPSF1-206ENST00000531480 LINC00477Q96M19 166 aa10.5□□□□□ -0.73
CPSF1-206ENST00000531480 AGPAT4-IT1Q9H0P7 198 aa10.5□□□□□ -0.73
CPSF1-206ENST00000531480 XCL2Q9UBD3 114 aa10.5□□□□□ -0.73
CPSF1-206ENST00000531480 X6R8D5 127 aa10.5□□□□□ -0.73
CPSF1-206ENST00000531480 TRBV7-9A0A0J9YWB2 115 aa10.49□□□□□ -0.73
CPSF1-206ENST00000531480 ZNF727A8MUV8 499 aa10.49□□□□□ -0.73
CPSF1-206ENST00000531480 GGTLC3B5MD39 225 aa10.49□□□□□ -0.73
CPSF1-206ENST00000531480 DIRC3C9JPN6 131 aa10.49□□□□□ -0.73
CPSF1-206ENST00000531480 CT45A10P0DMU9 189 aa10.49□□□□□ -0.73
CPSF1-206ENST00000531480 PRB4P10163 310 aaPredicted RBP10.49□□□□□ -0.73
CPSF1-206ENST00000531480 CEBPGP53567 150 aa10.49□□□□□ -0.73
CPSF1-206ENST00000531480 IGF2BP2-AS1Q96M15 143 aa10.49□□□□□ -0.73
CPSF1-206ENST00000531480 NEU1Q99519 415 aa10.49□□□□□ -0.73
CPSF1-206ENST00000531480 EPDR1Q9UM22 224 aa10.49□□□□□ -0.73
CPSF1-206ENST00000531480 DNAH7Q8WXX0 4024 aa10.49□□□□□ -0.73
CPSF1-206ENST00000531480 IGKV2-40A0A087WW87 121 aaPredicted RBP10.48□□□□□ -0.73
CPSF1-206ENST00000531480 B4DEV8 164 aa10.48□□□□□ -0.73
CPSF1-206ENST00000531480 M0R2Z0 102 aa10.48□□□□□ -0.73
CPSF1-206ENST00000531480 IGKV2D-40P01614 121 aaPredicted RBP10.48□□□□□ -0.73
CPSF1-206ENST00000531480 CRISP2P16562 243 aa10.48□□□□□ -0.73
CPSF1-206ENST00000531480 CDKN1BP46527 198 aa10.48□□□□□ -0.73
CPSF1-206ENST00000531480 FXYD7P58549 80 aa10.48□□□□□ -0.73
CPSF1-206ENST00000531480 TAS2R60P59551 318 aa10.48□□□□□ -0.73
CPSF1-206ENST00000531480 SPINK13Q1W4C9 94 aa10.48□□□□□ -0.73
CPSF1-206ENST00000531480 TMEM241Q24JQ0 296 aa10.48□□□□□ -0.73
CPSF1-206ENST00000531480 C1orf158Q8N1D5 194 aa10.48□□□□□ -0.73
CPSF1-206ENST00000531480 OR11H2Q8NH07 326 aa10.48□□□□□ -0.73
CPSF1-206ENST00000531480 C11orf52Q96A22 123 aa10.48□□□□□ -0.73
CPSF1-206ENST00000531480 VGLL1Q99990 258 aa10.48□□□□□ -0.73
CPSF1-206ENST00000531480 SMIM7Q9BQ49 75 aa10.48□□□□□ -0.73
CPSF1-206ENST00000531480 ATG101Q9BSB4 218 aa10.48□□□□□ -0.73
CPSF1-206ENST00000531480 KLLNB2CW77 178 aa10.47□□□□□ -0.73
CPSF1-206ENST00000531480 AKR1C3P42330 323 aa10.47□□□□□ -0.73
CPSF1-206ENST00000531480 UBE2G1P62253 170 aa10.47□□□□□ -0.73
CPSF1-206ENST00000531480 ERCC8Q13216 396 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms