RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 TMEM183AQ8IXX5 376 aa7.44□□□□□ -1.22
CTNND1-228ENST00000531007 DCANP1Q8TF63 244 aa7.44□□□□□ -1.22
CTNND1-228ENST00000531007 LINC00477Q96M19 166 aa7.44□□□□□ -1.22
CTNND1-228ENST00000531007 SPAG8Q99932 426 aaPredicted RBP7.44□□□□□ -1.22
CTNND1-228ENST00000531007 NDFIP1Q9BT67 221 aa7.44□□□□□ -1.22
CTNND1-228ENST00000531007 MS4A6AQ9H2W1 248 aa7.44□□□□□ -1.22
CTNND1-228ENST00000531007 TRAV8-2A0A0B4J237 113 aa7.43□□□□□ -1.22
CTNND1-228ENST00000531007 K7EQG2 157 aa7.43□□□□□ -1.22
CTNND1-228ENST00000531007 SNRPCP09234 159 aaKnown RBP7.43□□□□□ -1.22
CTNND1-228ENST00000531007 INSL3P51460 131 aa7.43□□□□□ -1.22
CTNND1-228ENST00000531007 GNG5P63218 68 aa7.43□□□□□ -1.22
CTNND1-228ENST00000531007 DEFB114Q30KQ6 69 aa7.43□□□□□ -1.22
CTNND1-228ENST00000531007 NSUN5P1Q3KNT7 163 aa7.43□□□□□ -1.22
CTNND1-228ENST00000531007 C9orf47Q6ZRZ4 202 aa7.43□□□□□ -1.22
CTNND1-228ENST00000531007 FAM231DQ6ZW35 169 aa7.43□□□□□ -1.22
CTNND1-228ENST00000531007 C15orf54Q8N8G6 183 aa7.43□□□□□ -1.22
CTNND1-228ENST00000531007 OCC1Q8TAD7 63 aa7.43□□□□□ -1.22
CTNND1-228ENST00000531007 TMEM158Q8WZ71 300 aa7.43□□□□□ -1.22
CTNND1-228ENST00000531007 ISOC2Q96AB3 205 aa7.43□□□□□ -1.22
CTNND1-228ENST00000531007 BTF3L4Q96K17 158 aa7.43□□□□□ -1.22
CTNND1-228ENST00000531007 IMMP2LQ96T52 175 aa7.43□□□□□ -1.22
CTNND1-228ENST00000531007 DERL1Q9BUN8 251 aa7.43□□□□□ -1.22
CTNND1-228ENST00000531007 RPS10P5Q9NQ39 176 aa7.43□□□□□ -1.22
CTNND1-228ENST00000531007 SMCO4Q9NRQ5 59 aa7.43□□□□□ -1.22
CTNND1-228ENST00000531007 PSG8Q9UQ74 426 aa7.43□□□□□ -1.22
CTNND1-228ENST00000531007 TRBV20OR9-2A0A075B6H5 130 aa7.42□□□□□ -1.22
CTNND1-228ENST00000531007 OR4C46A6NHA9 309 aa7.42□□□□□ -1.22
CTNND1-228ENST00000531007 M0R3E3 92 aa7.42□□□□□ -1.22
CTNND1-228ENST00000531007 IGLV2-11P01706 119 aa7.42□□□□□ -1.22
CTNND1-228ENST00000531007 KRTAP10-3P60369 221 aa7.42□□□□□ -1.22
CTNND1-228ENST00000531007 TMEM78Q5T7P6 136 aa7.42□□□□□ -1.22
CTNND1-228ENST00000531007 Q86TA4 180 aa7.42□□□□□ -1.22
CTNND1-228ENST00000531007 ZNF738Q8NE65 137 aa7.42□□□□□ -1.22
CTNND1-228ENST00000531007 OR10J6PQ8NGY7 276 aa7.42□□□□□ -1.22
CTNND1-228ENST00000531007 SFRP2Q96HF1 295 aa7.42□□□□□ -1.22
CTNND1-228ENST00000531007 MCRIP2Q9BUT9 160 aaKnown RBP7.42□□□□□ -1.22
CTNND1-228ENST00000531007 ZNF747Q9BV97 191 aa7.42□□□□□ -1.22
CTNND1-228ENST00000531007 MLST8Q9BVC4 326 aa7.42□□□□□ -1.22
CTNND1-228ENST00000531007 OSTCQ9NRP0 149 aa7.42□□□□□ -1.22
CTNND1-228ENST00000531007 RPH3ALQ9UNE2 315 aa7.42□□□□□ -1.22
CTNND1-228ENST00000531007 STAB1Q9NY15 2570 aa7.42□□□□□ -1.22
CTNND1-228ENST00000531007 CT45A10P0DMU9 189 aa7.41□□□□□ -1.22
CTNND1-228ENST00000531007 ZNF138P52744 262 aa7.41□□□□□ -1.22
CTNND1-228ENST00000531007 ADAMTSL5Q6ZMM2 481 aa7.41□□□□□ -1.22
CTNND1-228ENST00000531007 LINC00479Q96M42 142 aa7.41□□□□□ -1.22
CTNND1-228ENST00000531007 DUX3Q96PT4 197 aa7.41□□□□□ -1.22
CTNND1-228ENST00000531007 ODF3Q96PU9 254 aa7.41□□□□□ -1.22
CTNND1-228ENST00000531007 FAM110AQ9BQ89 295 aa7.41□□□□□ -1.22
CTNND1-228ENST00000531007 ZNF492Q9P255 531 aa7.41□□□□□ -1.22
CTNND1-228ENST00000531007 TRAV34A0A0B4J273 112 aa7.4□□□□□ -1.22
CTNND1-228ENST00000531007 H7BYZ3 331 aa7.4□□□□□ -1.22
CTNND1-228ENST00000531007 DUSP14O95147 198 aaKnown RBP7.4□□□□□ -1.22
CTNND1-228ENST00000531007 IGLV2-8P01709 118 aa7.4□□□□□ -1.22
CTNND1-228ENST00000531007 S100PP25815 95 aa7.4□□□□□ -1.22
CTNND1-228ENST00000531007 ERVFC1-1P60608 527 aa7.4□□□□□ -1.22
CTNND1-228ENST00000531007 RPL19P84098 196 aaKnown RBP7.4□□□□□ -1.22
CTNND1-228ENST00000531007 RNF212Q495C1 297 aa7.4□□□□□ -1.22
CTNND1-228ENST00000531007 CT83Q5H943 113 aa7.4□□□□□ -1.22
CTNND1-228ENST00000531007 IBA57Q5T440 356 aaKnown RBP7.4□□□□□ -1.22
CTNND1-228ENST00000531007 PRNTQ86SH4 94 aa7.4□□□□□ -1.22
CTNND1-228ENST00000531007 RNF182Q8N6D2 247 aa7.4□□□□□ -1.22
CTNND1-228ENST00000531007 LINC00482Q8N8I6 264 aa7.4□□□□□ -1.22
CTNND1-228ENST00000531007 OR4B1Q8NGF8 309 aa7.4□□□□□ -1.22
CTNND1-228ENST00000531007 OR8A1Q8NGG7 326 aa7.4□□□□□ -1.22
CTNND1-228ENST00000531007 OR10G8Q8NGN5 311 aa7.4□□□□□ -1.22
CTNND1-228ENST00000531007 DAZAP1Q96EP5 407 aaKnown RBP7.4□□□□□ -1.22
CTNND1-228ENST00000531007 PRR25Q96S07 402 aa7.4□□□□□ -1.22
CTNND1-228ENST00000531007 TRAV9-1A0A075B6T8 112 aa7.39□□□□□ -1.23
CTNND1-228ENST00000531007 NPIPB6E9PJ23 425 aa7.39□□□□□ -1.23
CTNND1-228ENST00000531007 SAP30O75446 220 aa7.39□□□□□ -1.23
CTNND1-228ENST00000531007 IGLV1-51P01701 117 aa7.39□□□□□ -1.23
CTNND1-228ENST00000531007 MGST1P10620 155 aaKnown RBP7.39□□□□□ -1.23
CTNND1-228ENST00000531007 SRSF2Q01130 221 aaKnown RBP7.39□□□□□ -1.23
CTNND1-228ENST00000531007 KRTAP24-1Q3LI83 254 aa7.39□□□□□ -1.23
CTNND1-228ENST00000531007 CD300EQ496F6 205 aaPredicted RBP7.39□□□□□ -1.23
CTNND1-228ENST00000531007 SMUG1Q53HV7 270 aa7.39□□□□□ -1.23
CTNND1-228ENST00000531007 EBLN2Q6P2I7 272 aa7.39□□□□□ -1.23
CTNND1-228ENST00000531007 KCNIP4Q6PIL6 250 aa7.39□□□□□ -1.23
CTNND1-228ENST00000531007 ATRAIDQ6UW56 229 aa7.39□□□□□ -1.23
CTNND1-228ENST00000531007 FOXI2Q6ZQN5 318 aa7.39□□□□□ -1.23
CTNND1-228ENST00000531007 TMEM61Q8N0U2 210 aa7.39□□□□□ -1.23
CTNND1-228ENST00000531007 ASCL2Q99929 193 aa7.39□□□□□ -1.23
CTNND1-228ENST00000531007 GPR61Q9BZJ8 451 aa7.39□□□□□ -1.23
CTNND1-228ENST00000531007 IGKV3-7A0A075B6H7 116 aa7.38□□□□□ -1.23
CTNND1-228ENST00000531007 IGKV2-40A0A087WW87 121 aaPredicted RBP7.38□□□□□ -1.23
CTNND1-228ENST00000531007 TRAV8-1A0A0A6YYK1 113 aa7.38□□□□□ -1.23
CTNND1-228ENST00000531007 FAM231BA6NCW3 169 aa7.38□□□□□ -1.23
CTNND1-228ENST00000531007 ZNF705FA8MVS1 300 aaPredicted RBP7.38□□□□□ -1.23
CTNND1-228ENST00000531007 K7EN84 100 aa7.38□□□□□ -1.23
CTNND1-228ENST00000531007 IGKV2D-40P01614 121 aaPredicted RBP7.38□□□□□ -1.23
CTNND1-228ENST00000531007 EDN2P20800 178 aa7.38□□□□□ -1.23
CTNND1-228ENST00000531007 HLA-DMBP28068 263 aa7.38□□□□□ -1.23
CTNND1-228ENST00000531007 FAM162BQ5T6X4 162 aa7.38□□□□□ -1.23
CTNND1-228ENST00000531007 C9orf66Q5T8R8 295 aa7.38□□□□□ -1.23
CTNND1-228ENST00000531007 IGFL4Q6B9Z1 124 aa7.38□□□□□ -1.23
CTNND1-228ENST00000531007 C12orf54Q6X4T0 127 aa7.38□□□□□ -1.23
CTNND1-228ENST00000531007 GBGT1Q8N5D6 347 aa7.38□□□□□ -1.23
CTNND1-228ENST00000531007 C3orf56Q8N813 242 aa7.38□□□□□ -1.23
CTNND1-228ENST00000531007 WFDC9Q8NEX5 89 aa7.38□□□□□ -1.23
CTNND1-228ENST00000531007 C20orf173Q96LM9 149 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms