RNA–Protein interactions for RNA: ENST00000529999.5

PUF60-215, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-215ENST00000529999 PRAC2D3DTV9 90 aa10.64□□□□□ -0.71
PUF60-215ENST00000529999 K7EQM0 130 aa10.64□□□□□ -0.71
PUF60-215ENST00000529999 GNG5P63218 68 aa10.64□□□□□ -0.71
PUF60-215ENST00000529999 UQCC3Q6UW78 93 aa10.64□□□□□ -0.71
PUF60-215ENST00000529999 C9orf47Q6ZRZ4 202 aa10.64□□□□□ -0.71
PUF60-215ENST00000529999 OR8A1Q8NGG7 326 aa10.64□□□□□ -0.71
PUF60-215ENST00000529999 C2CD4CQ8TF44 421 aa10.64□□□□□ -0.71
PUF60-215ENST00000529999 CLUHP3Q96NS8 147 aa10.64□□□□□ -0.71
PUF60-215ENST00000529999 KLF12Q9Y4X4 402 aa10.64□□□□□ -0.71
PUF60-215ENST00000529999 SCO2A0A1W2PP80 73 aa10.63□□□□□ -0.71
PUF60-215ENST00000529999 NPIPB6E9PJ23 425 aa10.63□□□□□ -0.71
PUF60-215ENST00000529999 DUSP14O95147 198 aaKnown RBP10.63□□□□□ -0.71
PUF60-215ENST00000529999 SRP19P09132 144 aaKnown RBP10.63□□□□□ -0.71
PUF60-215ENST00000529999 HLA-DRB4P13762 266 aa10.63□□□□□ -0.71
PUF60-215ENST00000529999 SRSF3P84103 164 aaKnown RBP10.63□□□□□ -0.71
PUF60-215ENST00000529999 EBLN2Q6P2I7 272 aa10.63□□□□□ -0.71
PUF60-215ENST00000529999 TMEM75Q8N9X5 138 aa10.63□□□□□ -0.71
PUF60-215ENST00000529999 OR10J6PQ8NGY7 276 aa10.63□□□□□ -0.71
PUF60-215ENST00000529999 HLA-DRB4X5D2U9 266 aa10.63□□□□□ -0.71
PUF60-215ENST00000529999 TRBV6-1A0A0K0K1D8 114 aa10.62□□□□□ -0.71
PUF60-215ENST00000529999 F6UB75 175 aa10.62□□□□□ -0.71
PUF60-215ENST00000529999 H3BMM0 161 aa10.62□□□□□ -0.71
PUF60-215ENST00000529999 IGLV2-11P01706 119 aa10.62□□□□□ -0.71
PUF60-215ENST00000529999 S100A9P06702 114 aaKnown RBP10.62□□□□□ -0.71
PUF60-215ENST00000529999 GDF5OSQ5U4N7 250 aa10.62□□□□□ -0.71
PUF60-215ENST00000529999 GOLT1AQ6ZVE7 132 aa10.62□□□□□ -0.71
PUF60-215ENST00000529999 COMMD7Q86VX2 200 aa10.62□□□□□ -0.71
PUF60-215ENST00000529999 APRG1Q8IVJ8 170 aa10.62□□□□□ -0.71
PUF60-215ENST00000529999 LINC00477Q96M19 166 aa10.62□□□□□ -0.71
PUF60-215ENST00000529999 LYSTQ99698 3801 aa10.62□□□□□ -0.71
PUF60-215ENST00000529999 IGKV2-40A0A087WW87 121 aaPredicted RBP10.61□□□□□ -0.71
PUF60-215ENST00000529999 TRBV7-9A0A0J9YWB2 115 aa10.61□□□□□ -0.71
PUF60-215ENST00000529999 IGKV2D-40P01614 121 aaPredicted RBP10.61□□□□□ -0.71
PUF60-215ENST00000529999 DEFB1P60022 68 aa10.61□□□□□ -0.71
PUF60-215ENST00000529999 ZNF124Q15973 351 aa10.61□□□□□ -0.71
PUF60-215ENST00000529999 TMEM183BQ1AE95 376 aa10.61□□□□□ -0.71
PUF60-215ENST00000529999 FMC1Q96HJ9 113 aa10.61□□□□□ -0.71
PUF60-215ENST00000529999 VGLL1Q99990 258 aa10.61□□□□□ -0.71
PUF60-215ENST00000529999 AGPAT4-IT1Q9H0P7 198 aa10.61□□□□□ -0.71
PUF60-215ENST00000529999 RPH3ALQ9UNE2 315 aa10.61□□□□□ -0.71
PUF60-215ENST00000529999 LENEPQ9Y5L5 61 aa10.61□□□□□ -0.71
PUF60-215ENST00000529999 KNCNA6PVL3 124 aa10.6□□□□□ -0.71
PUF60-215ENST00000529999 C9JQL5 133 aa10.6□□□□□ -0.71
PUF60-215ENST00000529999 AKR1C3P42330 323 aa10.6□□□□□ -0.71
PUF60-215ENST00000529999 CNN1P51911 297 aaKnown RBP10.6□□□□□ -0.71
PUF60-215ENST00000529999 TAS2R60P59551 318 aa10.6□□□□□ -0.71
PUF60-215ENST00000529999 FLI1Q01543 452 aaPredicted RBP10.6□□□□□ -0.71
PUF60-215ENST00000529999 HIST1H1AQ02539 215 aaPredicted RBP10.6□□□□□ -0.71
PUF60-215ENST00000529999 NDUFA5Q16718 116 aa10.6□□□□□ -0.71
PUF60-215ENST00000529999 ACTL10Q5JWF8 245 aa10.6□□□□□ -0.71
PUF60-215ENST00000529999 TMEM78Q5T7P6 136 aa10.6□□□□□ -0.71
PUF60-215ENST00000529999 TRPT1Q86TN4 253 aaKnown RBP10.6□□□□□ -0.71
PUF60-215ENST00000529999 FAM19A4Q96LR4 140 aa10.6□□□□□ -0.71
PUF60-215ENST00000529999 ODF3Q96PU9 254 aa10.6□□□□□ -0.71
PUF60-215ENST00000529999 TM2D3Q9BRN9 247 aa10.6□□□□□ -0.71
PUF60-215ENST00000529999 SLC35B3Q9H1N7 401 aa10.6□□□□□ -0.71
PUF60-215ENST00000529999 ZNF492Q9P255 531 aa10.6□□□□□ -0.71
PUF60-215ENST00000529999 DNAH1Q9P2D7 4330 aa10.6□□□□□ -0.71
PUF60-215ENST00000529999 A8MZ25 164 aa10.59□□□□□ -0.71
PUF60-215ENST00000529999 ZNF705DP0CH99 300 aaPredicted RBP10.59□□□□□ -0.71
PUF60-215ENST00000529999 ZNF705BP0CI00 300 aaPredicted RBP10.59□□□□□ -0.71
PUF60-215ENST00000529999 ZNF138P52744 262 aa10.59□□□□□ -0.71
PUF60-215ENST00000529999 UBE2G1P62253 170 aa10.59□□□□□ -0.71
PUF60-215ENST00000529999 ERCC8Q13216 396 aa10.59□□□□□ -0.71
PUF60-215ENST00000529999 STHQ8IWL8 128 aa10.59□□□□□ -0.71
PUF60-215ENST00000529999 DEFB125Q8N687 156 aa10.59□□□□□ -0.71
PUF60-215ENST00000529999 LINC00479Q96M42 142 aa10.59□□□□□ -0.71
PUF60-215ENST00000529999 WFDC10AQ9H1F0 79 aa10.59□□□□□ -0.71
PUF60-215ENST00000529999 TREM1Q9NP99 234 aa10.59□□□□□ -0.71
PUF60-215ENST00000529999 PSG8Q9UQ74 426 aa10.59□□□□□ -0.71
PUF60-215ENST00000529999 TRAV8-1A0A0A6YYK1 113 aa10.58□□□□□ -0.72
PUF60-215ENST00000529999 LTAP01374 205 aa10.58□□□□□ -0.72
PUF60-215ENST00000529999 IGHV4-30-4P0DP06 118 aa10.58□□□□□ -0.72
PUF60-215ENST00000529999 RPL35P42766 123 aaKnown RBP10.58□□□□□ -0.72
PUF60-215ENST00000529999 AMTNQ6UX39 209 aa10.58□□□□□ -0.72
PUF60-215ENST00000529999 DERL1Q9BUN8 251 aa10.58□□□□□ -0.72
PUF60-215ENST00000529999 PARLQ9H300 379 aa10.58□□□□□ -0.72
PUF60-215ENST00000529999 EDA2RQ9HAV5 297 aa10.58□□□□□ -0.72
PUF60-215ENST00000529999 ZFP30Q9Y2G7 519 aa10.58□□□□□ -0.72
PUF60-215ENST00000529999 TRAV34A0A0B4J273 112 aa10.57□□□□□ -0.72
PUF60-215ENST00000529999 CT45A10P0DMU9 189 aa10.57□□□□□ -0.72
PUF60-215ENST00000529999 PRB4P10163 310 aaPredicted RBP10.57□□□□□ -0.72
PUF60-215ENST00000529999 CRISP2P16562 243 aa10.57□□□□□ -0.72
PUF60-215ENST00000529999 FAM74A3Q4VXF1 159 aa10.57□□□□□ -0.72
PUF60-215ENST00000529999 SAPCD1Q5SSQ6 148 aa10.57□□□□□ -0.72
PUF60-215ENST00000529999 COX8CQ7Z4L0 72 aa10.57□□□□□ -0.72
PUF60-215ENST00000529999 Q86TA4 180 aa10.57□□□□□ -0.72
PUF60-215ENST00000529999 OR4B1Q8NGF8 309 aa10.57□□□□□ -0.72
PUF60-215ENST00000529999 SMIM12Q96EX1 92 aa10.57□□□□□ -0.72
PUF60-215ENST00000529999 IGF2BP2-AS1Q96M15 143 aa10.57□□□□□ -0.72
PUF60-215ENST00000529999 SRD5A3Q9H8P0 318 aa10.57□□□□□ -0.72
PUF60-215ENST00000529999 STARD9Q9P2P6 4700 aa10.56□□□□□ -0.72
PUF60-215ENST00000529999 RBMY1BA6NDE4 496 aaKnown RBP10.56□□□□□ -0.72
PUF60-215ENST00000529999 RBMY1EA6NEQ0 496 aaKnown RBP10.56□□□□□ -0.72
PUF60-215ENST00000529999 C9JCJ5 164 aa10.56□□□□□ -0.72
PUF60-215ENST00000529999 RBMY1DP0C7P1 496 aaKnown RBP10.56□□□□□ -0.72
PUF60-215ENST00000529999 LINC00322Q6ZN03 302 aaPredicted RBP10.56□□□□□ -0.72
PUF60-215ENST00000529999 PRNTQ86SH4 94 aa10.56□□□□□ -0.72
PUF60-215ENST00000529999 TVP23CQ96ET8 276 aa10.56□□□□□ -0.72
PUF60-215ENST00000529999 SGK494Q96LW2 274 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms