RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 INAFM2P0DMQ5 153 aa6.14□□□□□ -1.43
CTNND1-223ENST00000529986 PRSS22Q9GZN4 317 aa6.14□□□□□ -1.43
CTNND1-223ENST00000529986 BUB1B-PAK6H3BSN5 160 aa6.13□□□□□ -1.43
CTNND1-223ENST00000529986 MMP23AO75900 390 aa6.13□□□□□ -1.43
CTNND1-223ENST00000529986 TMEM75Q8N9X5 138 aa6.13□□□□□ -1.43
CTNND1-223ENST00000529986 IGHV3-38A0A0C4DH36 116 aa6.13□□□□□ -1.43
CTNND1-223ENST00000529986 KIR2DL5BA0A0G2JN68 375 aa6.13□□□□□ -1.43
CTNND1-223ENST00000529986 KIR2DL5BA0A0G2JPC4 375 aa6.13□□□□□ -1.43
CTNND1-223ENST00000529986 NDUFS7O75251 213 aa6.13□□□□□ -1.43
CTNND1-223ENST00000529986 LY6HO94772 140 aa6.13□□□□□ -1.43
CTNND1-223ENST00000529986 RNASE13Q5GAN3 156 aaKnown RBP6.13□□□□□ -1.43
CTNND1-223ENST00000529986 KIR2DL5AQ8N109 375 aa6.13□□□□□ -1.43
CTNND1-223ENST00000529986 MSRB2Q9Y3D2 182 aa6.13□□□□□ -1.43
CTNND1-223ENST00000529986 SYNJ2BPP57105 145 aa6.13□□□□□ -1.43
CTNND1-223ENST00000529986 NSUN5P1Q3KNT7 163 aa6.13□□□□□ -1.43
CTNND1-223ENST00000529986 CT83Q5H943 113 aa6.13□□□□□ -1.43
CTNND1-223ENST00000529986 C1orf147Q96MC9 270 aaPredicted RBP6.13□□□□□ -1.43
CTNND1-223ENST00000529986 RHPN1-AS1Q9BWJ2 59 aa6.13□□□□□ -1.43
CTNND1-223ENST00000529986 KLK9Q9UKQ9 250 aa6.13□□□□□ -1.43
CTNND1-223ENST00000529986 EP300Q09472 2414 aaPredicted RBP6.13□□□□□ -1.43
CTNND1-223ENST00000529986 NXPH4O95158 308 aa6.13□□□□□ -1.43
CTNND1-223ENST00000529986 ANKRD29Q8N6D5 301 aa6.13□□□□□ -1.43
CTNND1-223ENST00000529986 LINC00173Q6ZV60 143 aa6.12□□□□□ -1.43
CTNND1-223ENST00000529986 IGHV2-70DA0A0C4DH43 119 aa6.12□□□□□ -1.43
CTNND1-223ENST00000529986 C17orf82Q86X59 251 aaPredicted RBP6.12□□□□□ -1.43
CTNND1-223ENST00000529986 DEFB125Q8N687 156 aa6.12□□□□□ -1.43
CTNND1-223ENST00000529986 NDUFA12Q9UI09 145 aa6.12□□□□□ -1.43
CTNND1-223ENST00000529986 CACNA1GO43497 2377 aa6.12□□□□□ -1.43
CTNND1-223ENST00000529986 TRBV19A0A075B6N1 114 aa6.12□□□□□ -1.43
CTNND1-223ENST00000529986 RBM3P98179 157 aaKnown RBP6.12□□□□□ -1.43
CTNND1-223ENST00000529986 CFHR3Q02985 330 aa6.12□□□□□ -1.43
CTNND1-223ENST00000529986 TMEM105Q8N8V8 129 aa6.12□□□□□ -1.43
CTNND1-223ENST00000529986 C1orf43Q9BWL3 253 aa6.12□□□□□ -1.43
CTNND1-223ENST00000529986 SDHAF1A6NFY7 115 aa6.12□□□□□ -1.43
CTNND1-223ENST00000529986 FNDC10F2Z333 226 aa6.12□□□□□ -1.43
CTNND1-223ENST00000529986 TRPT1Q86TN4 253 aaKnown RBP6.12□□□□□ -1.43
CTNND1-223ENST00000529986 DTX2Q86UW9 622 aa6.12□□□□□ -1.43
CTNND1-223ENST00000529986 UBL5Q9BZL1 73 aa6.12□□□□□ -1.43
CTNND1-223ENST00000529986 TMEM14BQ9NUH8 114 aa6.12□□□□□ -1.43
CTNND1-223ENST00000529986 NOTCH3Q9UM47 2321 aa6.12□□□□□ -1.43
CTNND1-223ENST00000529986 OVOL3O00110 214 aa6.11□□□□□ -1.43
CTNND1-223ENST00000529986 Q0VFX4 171 aa6.11□□□□□ -1.43
CTNND1-223ENST00000529986 VOPP1Q96AW1 172 aa6.11□□□□□ -1.43
CTNND1-223ENST00000529986 MYO7BQ6PIF6 2116 aa6.11□□□□□ -1.43
CTNND1-223ENST00000529986 WNK2Q9Y3S1 2297 aa6.11□□□□□ -1.43
CTNND1-223ENST00000529986 YLPM1P49750 1951 aaKnown RBP6.11□□□□□ -1.43
CTNND1-223ENST00000529986 TRBV7-1A0A0A6YYK4 115 aa6.11□□□□□ -1.43
CTNND1-223ENST00000529986 H3BUX3 64 aa6.11□□□□□ -1.43
CTNND1-223ENST00000529986 PRB2P02812 416 aaPredicted RBP6.11□□□□□ -1.43
CTNND1-223ENST00000529986 SPINK13Q1W4C9 94 aa6.11□□□□□ -1.43
CTNND1-223ENST00000529986 TRAV25A0A0B4J276 109 aa6.11□□□□□ -1.43
CTNND1-223ENST00000529986 F8VRH5 84 aa6.11□□□□□ -1.43
CTNND1-223ENST00000529986 CDK2AP2O75956 126 aa6.11□□□□□ -1.43
CTNND1-223ENST00000529986 ZFP36L1Q07352 338 aaKnown RBP6.11□□□□□ -1.43
CTNND1-223ENST00000529986 UTF1Q5T230 341 aa6.11□□□□□ -1.43
CTNND1-223ENST00000529986 FAM231DQ6ZW35 169 aa6.11□□□□□ -1.43
CTNND1-223ENST00000529986 TMEM141Q96I45 108 aa6.11□□□□□ -1.43
CTNND1-223ENST00000529986 F8WEM9 126 aa6.1□□□□□ -1.43
CTNND1-223ENST00000529986 SPRY2O43597 315 aa6.1□□□□□ -1.43
CTNND1-223ENST00000529986 DEFB130BP0DP73 79 aa6.1□□□□□ -1.43
CTNND1-223ENST00000529986 DEFB130AP0DP74 79 aa6.1□□□□□ -1.43
CTNND1-223ENST00000529986 DUX4L9Q6RFH8 374 aaPredicted RBP6.1□□□□□ -1.43
CTNND1-223ENST00000529986 ZNF747Q9BV97 191 aa6.1□□□□□ -1.43
CTNND1-223ENST00000529986 SPTBN2O15020 2390 aa6.1□□□□□ -1.43
CTNND1-223ENST00000529986 J3QQQ9 107 aa6.1□□□□□ -1.43
CTNND1-223ENST00000529986 NDUFB8O95169 186 aa6.1□□□□□ -1.43
CTNND1-223ENST00000529986 CFPP27918 469 aa6.1□□□□□ -1.43
CTNND1-223ENST00000529986 FAM120AOSQ5T036 256 aa6.1□□□□□ -1.43
CTNND1-223ENST00000529986 PRR25Q96S07 402 aa6.1□□□□□ -1.43
CTNND1-223ENST00000529986 PLXNA2O75051 1894 aa6.1□□□□□ -1.43
CTNND1-223ENST00000529986 TRAV12-2A0A075B6T6 113 aa6.1□□□□□ -1.43
CTNND1-223ENST00000529986 NTN3O00634 580 aaPredicted RBP6.1□□□□□ -1.43
CTNND1-223ENST00000529986 DSCR9P59020 149 aa6.1□□□□□ -1.43
CTNND1-223ENST00000529986 PDE6HQ13956 83 aa6.1□□□□□ -1.43
CTNND1-223ENST00000529986 WFDC2Q14508 124 aa6.1□□□□□ -1.43
CTNND1-223ENST00000529986 NDUFA4L2Q9NRX3 87 aa6.1□□□□□ -1.43
CTNND1-223ENST00000529986 HLA-DMBP28068 263 aa6.1□□□□□ -1.43
CTNND1-223ENST00000529986 TPSG1Q9NRR2 321 aa6.1□□□□□ -1.43
CTNND1-223ENST00000529986 CRLF1O75462 422 aa6.1□□□□□ -1.43
CTNND1-223ENST00000529986 CHD3Q12873 2000 aaKnown RBP6.1□□□□□ -1.43
CTNND1-223ENST00000529986 PLXNA4Q9HCM2 1894 aa6.09□□□□□ -1.43
CTNND1-223ENST00000529986 PRSS29PA6NIE9 313 aa6.09□□□□□ -1.43
CTNND1-223ENST00000529986 I3L3M4 83 aa6.09□□□□□ -1.43
CTNND1-223ENST00000529986 GATA1P15976 413 aaPredicted RBP6.09□□□□□ -1.43
CTNND1-223ENST00000529986 COL8A2P25067 703 aa6.09□□□□□ -1.43
CTNND1-223ENST00000529986 RPL32P62910 135 aaKnown RBP6.09□□□□□ -1.43
CTNND1-223ENST00000529986 MRPL23Q16540 153 aaKnown RBP6.09□□□□□ -1.43
CTNND1-223ENST00000529986 TEX36Q5VZQ5 186 aa6.09□□□□□ -1.43
CTNND1-223ENST00000529986 PIP4P2Q8N4L2 257 aa6.09□□□□□ -1.43
CTNND1-223ENST00000529986 ZNF524Q96C55 264 aa6.09□□□□□ -1.43
CTNND1-223ENST00000529986 C17orf77Q96MU5 243 aa6.09□□□□□ -1.43
CTNND1-223ENST00000529986 B3GALT5-AS1P59052 145 aa6.09□□□□□ -1.43
CTNND1-223ENST00000529986 DEFB131AP59861 70 aa6.09□□□□□ -1.43
CTNND1-223ENST00000529986 RBMY1FQ15415 496 aaKnown RBP6.09□□□□□ -1.43
CTNND1-223ENST00000529986 SS18Q15532 418 aa6.09□□□□□ -1.43
CTNND1-223ENST00000529986 SIVA1O15304 175 aa6.09□□□□□ -1.43
CTNND1-223ENST00000529986 ANKRD39Q53RE8 183 aa6.09□□□□□ -1.43
CTNND1-223ENST00000529986 SSC4DQ8WTU2 575 aa6.09□□□□□ -1.43
CTNND1-223ENST00000529986 FXYD5Q96DB9 178 aa6.09□□□□□ -1.43
CTNND1-223ENST00000529986 RNF5Q99942 180 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms