RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 ARL14EPLP0DKL9 152 aa11.52□□□□□ -0.57
TSPAN4-218ENST00000529566 LEPP41159 167 aa11.52□□□□□ -0.57
TSPAN4-218ENST00000529566 EMP1P54849 157 aa11.52□□□□□ -0.57
TSPAN4-218ENST00000529566 Q6ZTC4 211 aa11.52□□□□□ -0.57
TSPAN4-218ENST00000529566 SSX7Q7RTT5 188 aa11.52□□□□□ -0.57
TSPAN4-218ENST00000529566 DKK2Q9UBU2 259 aa11.52□□□□□ -0.57
TSPAN4-218ENST00000529566 KLLNB2CW77 178 aa11.51□□□□□ -0.57
TSPAN4-218ENST00000529566 SPART-AS1P0CW21 52 aa11.51□□□□□ -0.57
TSPAN4-218ENST00000529566 TAS2R60P59551 318 aa11.51□□□□□ -0.57
TSPAN4-218ENST00000529566 ZNF726P1Q15940 193 aa11.51□□□□□ -0.57
TSPAN4-218ENST00000529566 ZNF767PQ75MW2 155 aa11.51□□□□□ -0.57
TSPAN4-218ENST00000529566 LINC01587Q99440 93 aa11.51□□□□□ -0.57
TSPAN4-218ENST00000529566 C20orf144Q9BQM9 153 aa11.51□□□□□ -0.57
TSPAN4-218ENST00000529566 OTORQ9NRC9 128 aa11.51□□□□□ -0.57
TSPAN4-218ENST00000529566 KLK5Q9Y337 293 aaPredicted RBP11.51□□□□□ -0.57
TSPAN4-218ENST00000529566 YTHDF2Q9Y5A9 579 aaKnown RBP11.51□□□□□ -0.57
TSPAN4-218ENST00000529566 RBAKDNA6NC62 111 aa11.5□□□□□ -0.57
TSPAN4-218ENST00000529566 DIRC3C9JPN6 131 aa11.5□□□□□ -0.57
TSPAN4-218ENST00000529566 CRISP2P16562 243 aa11.5□□□□□ -0.57
TSPAN4-218ENST00000529566 FAM222AQ5U5X8 452 aa11.5□□□□□ -0.57
TSPAN4-218ENST00000529566 ACTR3CQ9C0K3 210 aaPredicted RBP11.5□□□□□ -0.57
TSPAN4-218ENST00000529566 PLA2G2EQ9NZK7 142 aa11.5□□□□□ -0.57
TSPAN4-218ENST00000529566 ZNF492Q9P255 531 aa11.5□□□□□ -0.57
TSPAN4-218ENST00000529566 PGPA6NDG6 321 aa11.49□□□□□ -0.57
TSPAN4-218ENST00000529566 C11orf94C9JXX5 98 aa11.49□□□□□ -0.57
TSPAN4-218ENST00000529566 H7BYZ3 331 aa11.49□□□□□ -0.57
TSPAN4-218ENST00000529566 ZNF324O75467 553 aaPredicted RBP11.49□□□□□ -0.57
TSPAN4-218ENST00000529566 SLC25A5P05141 298 aaKnown RBP11.49□□□□□ -0.57
TSPAN4-218ENST00000529566 NMBP08949 121 aa11.49□□□□□ -0.57
TSPAN4-218ENST00000529566 GCHFRP30047 84 aa11.49□□□□□ -0.57
TSPAN4-218ENST00000529566 ZFAND2AQ8N6M9 145 aa11.49□□□□□ -0.57
TSPAN4-218ENST00000529566 RXFP4Q8TDU9 374 aa11.49□□□□□ -0.57
TSPAN4-218ENST00000529566 ARPC5LQ9BPX5 153 aa11.49□□□□□ -0.57
TSPAN4-218ENST00000529566 TRAV12-3A0A0B4J271 114 aa11.48□□□□□ -0.57
TSPAN4-218ENST00000529566 A0A0D9SG52 128 aa11.48□□□□□ -0.57
TSPAN4-218ENST00000529566 J3KRW8 73 aa11.48□□□□□ -0.57
TSPAN4-218ENST00000529566 CSN1S1P47710 185 aa11.48□□□□□ -0.57
TSPAN4-218ENST00000529566 CD300CQ08708 224 aa11.48□□□□□ -0.57
TSPAN4-218ENST00000529566 TMEM78Q5T7P6 136 aa11.48□□□□□ -0.57
TSPAN4-218ENST00000529566 ARL6IP6Q8N6S5 226 aa11.48□□□□□ -0.57
TSPAN4-218ENST00000529566 C2CD4CQ8TF44 421 aa11.48□□□□□ -0.57
TSPAN4-218ENST00000529566 TRAV10A0A0B4J240 114 aa11.47□□□□□ -0.57
TSPAN4-218ENST00000529566 TRBV7-9A0A0J9YWB2 115 aa11.47□□□□□ -0.57
TSPAN4-218ENST00000529566 CXorf1O96002 111 aa11.47□□□□□ -0.57
TSPAN4-218ENST00000529566 ZNF138P52744 262 aa11.47□□□□□ -0.57
TSPAN4-218ENST00000529566 PRR9Q5T870 116 aa11.47□□□□□ -0.57
TSPAN4-218ENST00000529566 TCTE3Q8IZS6 198 aa11.47□□□□□ -0.57
TSPAN4-218ENST00000529566 RNASE8Q8TDE3 154 aaKnown RBP11.47□□□□□ -0.57
TSPAN4-218ENST00000529566 HYLS1Q96M11 299 aa11.47□□□□□ -0.57
TSPAN4-218ENST00000529566 CTXND1A0A1B0GTU2 59 aa11.46□□□□□ -0.57
TSPAN4-218ENST00000529566 TEX48A0A1B0GUV7 120 aa11.46□□□□□ -0.57
TSPAN4-218ENST00000529566 C7orf71A4D174 169 aa11.46□□□□□ -0.57
TSPAN4-218ENST00000529566 BCL2L11O43521 198 aa11.46□□□□□ -0.57
TSPAN4-218ENST00000529566 HTN1P15515 57 aa11.46□□□□□ -0.57
TSPAN4-218ENST00000529566 BTN1A1Q13410 526 aa11.46□□□□□ -0.57
TSPAN4-218ENST00000529566 Q8TAT8 98 aa11.46□□□□□ -0.57
TSPAN4-218ENST00000529566 NIPSNAP3BQ9BS92 247 aa11.46□□□□□ -0.57
TSPAN4-218ENST00000529566 VPS13DQ5THJ4 4388 aa11.46□□□□□ -0.58
TSPAN4-218ENST00000529566 DEFB131BA0A096LNP1 70 aa11.45□□□□□ -0.58
TSPAN4-218ENST00000529566 RNASE4P34096 147 aaKnown RBP11.45□□□□□ -0.58
TSPAN4-218ENST00000529566 AKR1C8PQ5T2L2 129 aa11.45□□□□□ -0.58
TSPAN4-218ENST00000529566 Q6ZQT7 251 aa11.45□□□□□ -0.58
TSPAN4-218ENST00000529566 ZNF493Q6ZR52 646 aa11.45□□□□□ -0.58
TSPAN4-218ENST00000529566 TMUB2Q71RG4 321 aa11.45□□□□□ -0.58
TSPAN4-218ENST00000529566 TMEM263Q8WUH6 116 aaKnown RBP11.45□□□□□ -0.58
TSPAN4-218ENST00000529566 TMED6Q8WW62 240 aa11.45□□□□□ -0.58
TSPAN4-218ENST00000529566 C16orf74Q96GX8 76 aa11.45□□□□□ -0.58
TSPAN4-218ENST00000529566 LINC00467Q9BRT7 94 aa11.45□□□□□ -0.58
TSPAN4-218ENST00000529566 TMEM167BQ9NRX6 74 aa11.45□□□□□ -0.58
TSPAN4-218ENST00000529566 APLNQ9ULZ1 77 aa11.45□□□□□ -0.58
TSPAN4-218ENST00000529566 KMT2AQ03164 3969 aa11.45□□□□□ -0.58
TSPAN4-218ENST00000529566 LYRM9A8MSI8 78 aa11.44□□□□□ -0.58
TSPAN4-218ENST00000529566 IGLL5B9A064 214 aa11.44□□□□□ -0.58
TSPAN4-218ENST00000529566 GPX1P07203 203 aa11.44□□□□□ -0.58
TSPAN4-218ENST00000529566 GNG5P63218 68 aa11.44□□□□□ -0.58
TSPAN4-218ENST00000529566 FAM74A1Q5RGS3 127 aa11.44□□□□□ -0.58
TSPAN4-218ENST00000529566 CMTM2Q8TAZ6 248 aa11.44□□□□□ -0.58
TSPAN4-218ENST00000529566 LINC00476Q8WZB0 136 aa11.44□□□□□ -0.58
TSPAN4-218ENST00000529566 PYGO2Q9BRQ0 406 aa11.44□□□□□ -0.58
TSPAN4-218ENST00000529566 TMPRSS5Q9H3S3 457 aa11.44□□□□□ -0.58
TSPAN4-218ENST00000529566 LENEPQ9Y5L5 61 aa11.44□□□□□ -0.58
TSPAN4-218ENST00000529566 GGTLC3B5MD39 225 aa11.43□□□□□ -0.58
TSPAN4-218ENST00000529566 SEC11BP0C7V7 166 aa11.43□□□□□ -0.58
TSPAN4-218ENST00000529566 FHITP49789 147 aa11.43□□□□□ -0.58
TSPAN4-218ENST00000529566 TCTAP57738 103 aa11.43□□□□□ -0.58
TSPAN4-218ENST00000529566 LGALSLQ3ZCW2 172 aaPredicted RBP11.43□□□□□ -0.58
TSPAN4-218ENST00000529566 GOLT1AQ6ZVE7 132 aa11.43□□□□□ -0.58
TSPAN4-218ENST00000529566 TVP23CQ96ET8 276 aa11.43□□□□□ -0.58
TSPAN4-218ENST00000529566 ZNF471Q9BX82 626 aaPredicted RBP11.43□□□□□ -0.58
TSPAN4-218ENST00000529566 KANTRA0A1W2PQU2 76 aa11.42□□□□□ -0.58
TSPAN4-218ENST00000529566 A0A1W2PRE2 83 aa11.42□□□□□ -0.58
TSPAN4-218ENST00000529566 FGF8P55075 233 aaPredicted RBP11.42□□□□□ -0.58
TSPAN4-218ENST00000529566 DAD1P61803 113 aa11.42□□□□□ -0.58
TSPAN4-218ENST00000529566 SUMO1P63165 101 aaKnown RBP11.42□□□□□ -0.58
TSPAN4-218ENST00000529566 C5orf17Q8NAS9 161 aa11.42□□□□□ -0.58
TSPAN4-218ENST00000529566 NOP10Q9NPE3 64 aaKnown RBP11.42□□□□□ -0.58
TSPAN4-218ENST00000529566 RPH3ALQ9UNE2 315 aa11.42□□□□□ -0.58
TSPAN4-218ENST00000529566 TIMM8BQ9Y5J9 83 aaPredicted RBP11.42□□□□□ -0.58
TSPAN4-218ENST00000529566 IGHV4-4A0A075B6R2 117 aa11.41□□□□□ -0.58
TSPAN4-218ENST00000529566 TRAV8-1A0A0A6YYK1 113 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms