RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	NDFIP1	Q9BT67	221 aa		11.35	□□□□□ -0.59
NR1H3-231	ENST00000529540	NBEAP1	P0C6P0	100 aa		11.34	□□□□□ -0.59
NR1H3-231	ENST00000529540	C10orf55	Q5SWW7	151 aa		11.34	□□□□□ -0.59
NR1H3-231	ENST00000529540	PET117	Q6UWS5	81 aa		11.34	□□□□□ -0.59
NR1H3-231	ENST00000529540	LINC00322	Q6ZN03	302 aa	Predicted RBP	11.34	□□□□□ -0.59
NR1H3-231	ENST00000529540	GATD1	Q8NB37	220 aa		11.34	□□□□□ -0.59
NR1H3-231	ENST00000529540	RNASE8	Q8TDE3	154 aa	Known RBP	11.34	□□□□□ -0.59
NR1H3-231	ENST00000529540	TMEM191A	Q9H0A3	160 aa		11.34	□□□□□ -0.59
NR1H3-231	ENST00000529540	ESM1	Q9NQ30	184 aa		11.34	□□□□□ -0.59
NR1H3-231	ENST00000529540	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	11.33	□□□□□ -0.6
NR1H3-231	ENST00000529540	TCRA	P04437	139 aa		11.33	□□□□□ -0.6
NR1H3-231	ENST00000529540	CDKN1B	P46527	198 aa		11.33	□□□□□ -0.6
NR1H3-231	ENST00000529540	BLCAP	P62952	87 aa		11.33	□□□□□ -0.6
NR1H3-231	ENST00000529540	RHOG	P84095	191 aa		11.33	□□□□□ -0.6
NR1H3-231	ENST00000529540		Q8N2B8	174 aa		11.33	□□□□□ -0.6
NR1H3-231	ENST00000529540	DUX5	Q96PT3	197 aa		11.33	□□□□□ -0.6
NR1H3-231	ENST00000529540	MS4A6A	Q9H2W1	248 aa		11.33	□□□□□ -0.6
NR1H3-231	ENST00000529540	NPIPB5	A8MRT5	1133 aa		11.33	□□□□□ -0.6
NR1H3-231	ENST00000529540	TEX22	C9J3V5	150 aa		11.33	□□□□□ -0.6
NR1H3-231	ENST00000529540	HAX1	O00165	279 aa		11.33	□□□□□ -0.6
NR1H3-231	ENST00000529540	ATP6V0E1	O15342	81 aa		11.33	□□□□□ -0.6
NR1H3-231	ENST00000529540	LEPROTL1	O95214	131 aa		11.33	□□□□□ -0.6
NR1H3-231	ENST00000529540	ANKRD39	Q53RE8	183 aa		11.33	□□□□□ -0.6
NR1H3-231	ENST00000529540	OR1B1	Q8NGR6	318 aa		11.33	□□□□□ -0.6
NR1H3-231	ENST00000529540	OTOR	Q9NRC9	128 aa		11.33	□□□□□ -0.6
NR1H3-231	ENST00000529540	SH2D7	A6NKC9	451 aa	Predicted RBP	11.32	□□□□□ -0.6
NR1H3-231	ENST00000529540	APOH	P02749	345 aa	Predicted RBP	11.32	□□□□□ -0.6
NR1H3-231	ENST00000529540	NDP	Q00604	133 aa		11.32	□□□□□ -0.6
NR1H3-231	ENST00000529540	SLC25A34	Q6PIV7	304 aa		11.32	□□□□□ -0.6
NR1H3-231	ENST00000529540		Q86TA4	180 aa		11.32	□□□□□ -0.6
NR1H3-231	ENST00000529540	TMEM116	Q8NCL8	245 aa		11.32	□□□□□ -0.6
NR1H3-231	ENST00000529540	BLNK	Q8WV28	456 aa		11.32	□□□□□ -0.6
NR1H3-231	ENST00000529540	DAZAP1	Q96EP5	407 aa	Known RBP	11.32	□□□□□ -0.6
NR1H3-231	ENST00000529540	PGLYRP4	Q96LB8	373 aa		11.32	□□□□□ -0.6
NR1H3-231	ENST00000529540		Q9H3A6	140 aa		11.32	□□□□□ -0.6
NR1H3-231	ENST00000529540	SCRT2	Q9NQ03	307 aa		11.32	□□□□□ -0.6
NR1H3-231	ENST00000529540	TMEM14C	Q9P0S9	112 aa		11.32	□□□□□ -0.6
NR1H3-231	ENST00000529540	NSD1	Q96L73	2696 aa	Predicted RBP	11.32	□□□□□ -0.6
NR1H3-231	ENST00000529540	TRAV41	A0A0B4J266	112 aa		11.31	□□□□□ -0.6
NR1H3-231	ENST00000529540	ORM2	P19652	201 aa		11.31	□□□□□ -0.6
NR1H3-231	ENST00000529540	FOXA3	P55318	350 aa	Predicted RBP	11.31	□□□□□ -0.6
NR1H3-231	ENST00000529540	BVES-AS1	Q5T3Y7	98 aa		11.31	□□□□□ -0.6
NR1H3-231	ENST00000529540		Q6ZVH6	145 aa		11.31	□□□□□ -0.6
NR1H3-231	ENST00000529540	TTC9C	Q8N5M4	171 aa		11.31	□□□□□ -0.6
NR1H3-231	ENST00000529540	ZNF702P	Q9H963	129 aa		11.31	□□□□□ -0.6
NR1H3-231	ENST00000529540	HSPB8	Q9UJY1	196 aa		11.31	□□□□□ -0.6
NR1H3-231	ENST00000529540	MXRA5	Q9NR99	2828 aa		11.31	□□□□□ -0.6
NR1H3-231	ENST00000529540	HSBP1L1	C9JCN9	74 aa		11.3	□□□□□ -0.6
NR1H3-231	ENST00000529540	CHEK1	O14757	476 aa		11.3	□□□□□ -0.6
NR1H3-231	ENST00000529540	TAX1BP3	O14907	124 aa		11.3	□□□□□ -0.6
NR1H3-231	ENST00000529540	C21orf62-AS1	Q17RA5	79 aa		11.3	□□□□□ -0.6
NR1H3-231	ENST00000529540	C12orf54	Q6X4T0	127 aa		11.3	□□□□□ -0.6
NR1H3-231	ENST00000529540	LINC00173	Q6ZV60	143 aa		11.3	□□□□□ -0.6
NR1H3-231	ENST00000529540	DEFB125	Q8N687	156 aa		11.3	□□□□□ -0.6
NR1H3-231	ENST00000529540	OR4C5	Q8NGB2	326 aa		11.3	□□□□□ -0.6
NR1H3-231	ENST00000529540	MAP1LC3C	Q9BXW4	147 aa		11.3	□□□□□ -0.6
NR1H3-231	ENST00000529540	THYN1	Q9P016	225 aa		11.3	□□□□□ -0.6
NR1H3-231	ENST00000529540		H3BUA1	57 aa		11.3	□□□□□ -0.6
NR1H3-231	ENST00000529540	NDUFA7	O95182	113 aa		11.3	□□□□□ -0.6
NR1H3-231	ENST00000529540	ECSCR	Q19T08	205 aa		11.3	□□□□□ -0.6
NR1H3-231	ENST00000529540	SAPCD1	Q5SSQ6	148 aa		11.3	□□□□□ -0.6
NR1H3-231	ENST00000529540	FAM110D	Q8TAY7	271 aa	Predicted RBP	11.3	□□□□□ -0.6
NR1H3-231	ENST00000529540	PMCHL2	Q9BQD1	86 aa		11.3	□□□□□ -0.6
NR1H3-231	ENST00000529540	RPH3AL	Q9UNE2	315 aa		11.3	□□□□□ -0.6
NR1H3-231	ENST00000529540	F11R	Q9Y624	299 aa	Known RBP	11.3	□□□□□ -0.6
NR1H3-231	ENST00000529540	MAST4	O15021	2626 aa		11.29	□□□□□ -0.6
NR1H3-231	ENST00000529540	MTOR	P42345	2549 aa		11.29	□□□□□ -0.6
NR1H3-231	ENST00000529540		A0A1B0GW15	77 aa		11.29	□□□□□ -0.6
NR1H3-231	ENST00000529540	hDV102S1	A0JD36	115 aa		11.29	□□□□□ -0.6
NR1H3-231	ENST00000529540		M0QZ24	198 aa		11.29	□□□□□ -0.6
NR1H3-231	ENST00000529540	BRI3	O95415	125 aa		11.29	□□□□□ -0.6
NR1H3-231	ENST00000529540	IGHV3-48	P01763	117 aa		11.29	□□□□□ -0.6
NR1H3-231	ENST00000529540	EGR2	P11161	476 aa	Predicted RBP	11.29	□□□□□ -0.6
NR1H3-231	ENST00000529540	MPV17L2	Q567V2	206 aa		11.29	□□□□□ -0.6
NR1H3-231	ENST00000529540	LINC01545	Q5VT33	79 aa		11.29	□□□□□ -0.6
NR1H3-231	ENST00000529540	C16orf95	Q9H693	158 aa		11.29	□□□□□ -0.6
NR1H3-231	ENST00000529540	HIGD1A	Q9Y241	93 aa		11.29	□□□□□ -0.6
NR1H3-231	ENST00000529540	FN1	P02751	2386 aa	Known RBP	11.28	□□□□□ -0.6
NR1H3-231	ENST00000529540	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	11.28	□□□□□ -0.6
NR1H3-231	ENST00000529540	TMEM89	A2RUT3	159 aa		11.28	□□□□□ -0.6
NR1H3-231	ENST00000529540	HIST1H1A	Q02539	215 aa	Predicted RBP	11.28	□□□□□ -0.6
NR1H3-231	ENST00000529540		Q6ZSV7	163 aa		11.28	□□□□□ -0.6
NR1H3-231	ENST00000529540	SGK494	Q96LW2	274 aa		11.28	□□□□□ -0.6
NR1H3-231	ENST00000529540	ANK3	Q12955	4377 aa	Known RBP	11.28	□□□□□ -0.6
NR1H3-231	ENST00000529540	TNC	P24821	2201 aa		11.28	□□□□□ -0.6
NR1H3-231	ENST00000529540	IGLV2-11	P01706	119 aa		11.27	□□□□□ -0.6
NR1H3-231	ENST00000529540	VAMP3	Q15836	100 aa		11.27	□□□□□ -0.6
NR1H3-231	ENST00000529540	NUDT3	O95989	172 aa		11.27	□□□□□ -0.61
NR1H3-231	ENST00000529540	PPBP	P02775	128 aa		11.27	□□□□□ -0.61
NR1H3-231	ENST00000529540	APELA	P0DMC3	54 aa		11.27	□□□□□ -0.61
NR1H3-231	ENST00000529540	RIG	Q13278	110 aa		11.27	□□□□□ -0.61
NR1H3-231	ENST00000529540	KLK9	Q2XQG4	91 aa		11.27	□□□□□ -0.61
NR1H3-231	ENST00000529540	C19orf54	Q5BKX5	351 aa		11.27	□□□□□ -0.61
NR1H3-231	ENST00000529540	KLK9	Q9UKQ9	250 aa		11.27	□□□□□ -0.61
NR1H3-231	ENST00000529540	LINC01548	A6NM66	108 aa		11.26	□□□□□ -0.61
NR1H3-231	ENST00000529540	PPIF	P30405	207 aa	Known RBP	11.26	□□□□□ -0.61
NR1H3-231	ENST00000529540		Q6ZS46	218 aa		11.26	□□□□□ -0.61
NR1H3-231	ENST00000529540	TMEM75	Q8N9X5	138 aa		11.26	□□□□□ -0.61
NR1H3-231	ENST00000529540	DPF1	Q92782	380 aa		11.26	□□□□□ -0.61
NR1H3-231	ENST00000529540		A0A1B0GUT8	65 aa		11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms