RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 IBA57Q5T440 356 aaKnown RBP12.58□□□□□ -0.4
SSRP1-204ENST00000529002 S100A7AQ86SG5 101 aa12.58□□□□□ -0.4
SSRP1-204ENST00000529002 NPVFQ9HCQ7 196 aa12.58□□□□□ -0.4
SSRP1-204ENST00000529002 K7EPK0 472 aa12.57□□□□□ -0.4
SSRP1-204ENST00000529002 RGS13O14921 159 aa12.57□□□□□ -0.4
SSRP1-204ENST00000529002 AGPAT2O15120 278 aa12.57□□□□□ -0.4
SSRP1-204ENST00000529002 SSSCA1O60232 199 aa12.57□□□□□ -0.4
SSRP1-204ENST00000529002 COX7A2P2O60397 106 aa12.57□□□□□ -0.4
SSRP1-204ENST00000529002 ID3Q02535 119 aa12.57□□□□□ -0.4
SSRP1-204ENST00000529002 PCNPQ8WW12 178 aaKnown RBP12.57□□□□□ -0.4
SSRP1-204ENST00000529002 DIRAS2Q96HU8 199 aa12.57□□□□□ -0.4
SSRP1-204ENST00000529002 IGHV3-38A0A0C4DH36 116 aa12.56□□□□□ -0.4
SSRP1-204ENST00000529002 IBA57-AS1B1ANH7 110 aa12.56□□□□□ -0.4
SSRP1-204ENST00000529002 LECT2O14960 151 aa12.56□□□□□ -0.4
SSRP1-204ENST00000529002 GPX1P07203 203 aa12.56□□□□□ -0.4
SSRP1-204ENST00000529002 ARL16Q0P5N6 197 aa12.56□□□□□ -0.4
SSRP1-204ENST00000529002 PPP1R1AQ13522 171 aa12.56□□□□□ -0.4
SSRP1-204ENST00000529002 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.55□□□□□ -0.4
SSRP1-204ENST00000529002 IGHV1OR15-1A0A075B7D0 117 aa12.55□□□□□ -0.4
SSRP1-204ENST00000529002 SFT2D2O95562 160 aa12.55□□□□□ -0.4
SSRP1-204ENST00000529002 C10orf113Q5VZT2 155 aa12.55□□□□□ -0.4
SSRP1-204ENST00000529002 ZFAND2AQ8N6M9 145 aa12.55□□□□□ -0.4
SSRP1-204ENST00000529002 RAB2BQ8WUD1 216 aa12.55□□□□□ -0.4
SSRP1-204ENST00000529002 BLNKQ8WV28 456 aa12.55□□□□□ -0.4
SSRP1-204ENST00000529002 MGST2Q99735 147 aa12.55□□□□□ -0.4
SSRP1-204ENST00000529002 ARPC5LQ9BPX5 153 aa12.55□□□□□ -0.4
SSRP1-204ENST00000529002 RNF24Q9Y225 148 aa12.55□□□□□ -0.4
SSRP1-204ENST00000529002 PKHD1L1Q86WI1 4243 aa12.55□□□□□ -0.4
SSRP1-204ENST00000529002 IGHV3-30P01768 117 aa12.54□□□□□ -0.4
SSRP1-204ENST00000529002 IGHV3-33P01772 117 aa12.54□□□□□ -0.4
SSRP1-204ENST00000529002 IGHV3-30-3P0DP02 117 aa12.54□□□□□ -0.4
SSRP1-204ENST00000529002 IGHV3-30-5P0DP03 117 aa12.54□□□□□ -0.4
SSRP1-204ENST00000529002 PXDC1Q5TGL8 231 aa12.54□□□□□ -0.4
SSRP1-204ENST00000529002 TMEM14EPQ6UXP3 125 aa12.54□□□□□ -0.4
SSRP1-204ENST00000529002 ZNF546Q86UE3 836 aa12.54□□□□□ -0.4
SSRP1-204ENST00000529002 OR10P1Q8NGE3 313 aa12.54□□□□□ -0.4
SSRP1-204ENST00000529002 PIGBOS1A0A0B4J2F0 54 aa12.53□□□□□ -0.4
SSRP1-204ENST00000529002 LINC01556Q5JQF7 62 aa12.53□□□□□ -0.4
SSRP1-204ENST00000529002 SOSTQ9BQB4 213 aa12.53□□□□□ -0.4
SSRP1-204ENST00000529002 MGAT4CQ9UBM8 478 aa12.53□□□□□ -0.4
SSRP1-204ENST00000529002 IGKV2-40A0A087WW87 121 aaPredicted RBP12.52□□□□□ -0.41
SSRP1-204ENST00000529002 IGKV2D-40P01614 121 aaPredicted RBP12.52□□□□□ -0.41
SSRP1-204ENST00000529002 CRISP2P16562 243 aa12.52□□□□□ -0.41
SSRP1-204ENST00000529002 C4orf46Q504U0 113 aa12.52□□□□□ -0.41
SSRP1-204ENST00000529002 MUC21Q5SSG8 566 aa12.52□□□□□ -0.41
SSRP1-204ENST00000529002 IQCF2Q8IXL9 164 aa12.52□□□□□ -0.41
SSRP1-204ENST00000529002 EXOC3-AS1Q8N2X6 119 aa12.52□□□□□ -0.41
SSRP1-204ENST00000529002 SMIM8Q96KF7 97 aa12.52□□□□□ -0.41
SSRP1-204ENST00000529002 LINC00477Q96M19 166 aa12.52□□□□□ -0.41
SSRP1-204ENST00000529002 TXNDC17Q9BRA2 123 aa12.52□□□□□ -0.41
SSRP1-204ENST00000529002 NDUFB4O95168 129 aa12.51□□□□□ -0.41
SSRP1-204ENST00000529002 ORM1P02763 201 aa12.51□□□□□ -0.41
SSRP1-204ENST00000529002 SPCS2Q15005 226 aa12.51□□□□□ -0.41
SSRP1-204ENST00000529002 MIC13Q5XKP0 118 aa12.51□□□□□ -0.41
SSRP1-204ENST00000529002 Q8N3U1 123 aa12.51□□□□□ -0.41
SSRP1-204ENST00000529002 OR10G4Q8NGN3 311 aa12.51□□□□□ -0.41
SSRP1-204ENST00000529002 FNDC10F2Z333 226 aa12.5□□□□□ -0.41
SSRP1-204ENST00000529002 PPT1P50897 306 aa12.5□□□□□ -0.41
SSRP1-204ENST00000529002 HNRNPA3P51991 378 aaKnown RBP12.5□□□□□ -0.41
SSRP1-204ENST00000529002 GUK1Q16774 197 aa12.5□□□□□ -0.41
SSRP1-204ENST00000529002 NHLRC2Q8NBF2 726 aa12.5□□□□□ -0.41
SSRP1-204ENST00000529002 DNAJC4Q9NNZ3 241 aa12.5□□□□□ -0.41
SSRP1-204ENST00000529002 TRBV19A0A075B6N1 114 aa12.49□□□□□ -0.41
SSRP1-204ENST00000529002 IGHV3-16A0A0C4DH30 117 aa12.49□□□□□ -0.41
SSRP1-204ENST00000529002 C9JCJ5 164 aa12.49□□□□□ -0.41
SSRP1-204ENST00000529002 MRPL53Q96EL3 112 aaKnown RBP12.49□□□□□ -0.41
SSRP1-204ENST00000529002 SLC25A31Q9H0C2 315 aa12.49□□□□□ -0.41
SSRP1-204ENST00000529002 SCGB1D2O95969 90 aa12.48□□□□□ -0.41
SSRP1-204ENST00000529002 C9orf47Q6ZRZ4 202 aa12.48□□□□□ -0.41
SSRP1-204ENST00000529002 MCFD2Q8NI22 146 aa12.48□□□□□ -0.41
SSRP1-204ENST00000529002 CIRBP-AS1Q8TBR5 109 aa12.48□□□□□ -0.41
SSRP1-204ENST00000529002 ZNF253O75346 499 aa12.47□□□□□ -0.41
SSRP1-204ENST00000529002 PYYP10082 97 aa12.47□□□□□ -0.41
SSRP1-204ENST00000529002 OR10J3Q5JRS4 329 aa12.47□□□□□ -0.41
SSRP1-204ENST00000529002 Q8TAT8 98 aa12.47□□□□□ -0.41
SSRP1-204ENST00000529002 RASL10AQ92737 203 aa12.47□□□□□ -0.41
SSRP1-204ENST00000529002 SRRQ9GZT4 340 aa12.47□□□□□ -0.41
SSRP1-204ENST00000529002 IGLV2-8P01709 118 aa12.46□□□□□ -0.41
SSRP1-204ENST00000529002 CAMLGP49069 296 aa12.46□□□□□ -0.41
SSRP1-204ENST00000529002 FAM122CQ6P4D5 195 aa12.46□□□□□ -0.41
SSRP1-204ENST00000529002 CHAC1Q9BUX1 264 aa12.46□□□□□ -0.41
SSRP1-204ENST00000529002 ZNF492Q9P255 531 aa12.46□□□□□ -0.41
SSRP1-204ENST00000529002 TIRAPP58753 221 aa12.45□□□□□ -0.42
SSRP1-204ENST00000529002 ZNF846Q147U1 533 aa12.45□□□□□ -0.42
SSRP1-204ENST00000529002 TMEM183BQ1AE95 376 aa12.45□□□□□ -0.42
SSRP1-204ENST00000529002 TMEM78Q5T7P6 136 aa12.45□□□□□ -0.42
SSRP1-204ENST00000529002 NRARPQ7Z6K4 114 aa12.45□□□□□ -0.42
SSRP1-204ENST00000529002 TMEM183AQ8IXX5 376 aa12.45□□□□□ -0.42
SSRP1-204ENST00000529002 BAALCQ8WXS3 180 aa12.45□□□□□ -0.42
SSRP1-204ENST00000529002 RABL2AQ9UBK7 228 aaPredicted RBP12.45□□□□□ -0.42
SSRP1-204ENST00000529002 RSL24D1Q9UHA3 163 aaKnown RBP12.45□□□□□ -0.42
SSRP1-204ENST00000529002 TIMM9Q9Y5J7 89 aa12.45□□□□□ -0.42
SSRP1-204ENST00000529002 LRP2P98164 4655 aa12.44□□□□□ -0.42
SSRP1-204ENST00000529002 TRAV8-6A0A0B4J262 113 aa12.44□□□□□ -0.42
SSRP1-204ENST00000529002 TRAV4A0A0B4J268 109 aa12.44□□□□□ -0.42
SSRP1-204ENST00000529002 NMBP08949 121 aa12.44□□□□□ -0.42
SSRP1-204ENST00000529002 SMIM18P0DKX4 95 aa12.44□□□□□ -0.42
SSRP1-204ENST00000529002 Q6ZRG5 221 aa12.44□□□□□ -0.42
SSRP1-204ENST00000529002 OR4C5Q8NGB2 326 aa12.44□□□□□ -0.42
SSRP1-204ENST00000529002 TRIM63Q969Q1 353 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms