RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 NOTCH1P46531 2555 aa18.3■□□□□ 0.52
LDLRAD3-203ENST00000528989 PGPEP1LA6NFU8 196 aa18.29■□□□□ 0.52
LDLRAD3-203ENST00000528989 K7EQM0 130 aa18.29■□□□□ 0.52
LDLRAD3-203ENST00000528989 TMEM183BQ1AE95 376 aa18.29■□□□□ 0.52
LDLRAD3-203ENST00000528989 EBLN2Q6P2I7 272 aa18.29■□□□□ 0.52
LDLRAD3-203ENST00000528989 FOXI2Q6ZQN5 318 aa18.29■□□□□ 0.52
LDLRAD3-203ENST00000528989 GTSCR1Q86UQ5 136 aa18.29■□□□□ 0.52
LDLRAD3-203ENST00000528989 DEFB125Q8N687 156 aa18.29■□□□□ 0.52
LDLRAD3-203ENST00000528989 OR4B1Q8NGF8 309 aa18.29■□□□□ 0.52
LDLRAD3-203ENST00000528989 PSG8Q9UQ74 426 aa18.29■□□□□ 0.52
LDLRAD3-203ENST00000528989 RBAKDNA6NC62 111 aa18.29■□□□□ 0.52
LDLRAD3-203ENST00000528989 NDUFS6O75380 124 aaKnown RBP18.29■□□□□ 0.52
LDLRAD3-203ENST00000528989 UBE2G1P62253 170 aa18.29■□□□□ 0.52
LDLRAD3-203ENST00000528989 C9orf47Q6ZRZ4 202 aa18.29■□□□□ 0.52
LDLRAD3-203ENST00000528989 TMEM75Q8N9X5 138 aa18.29■□□□□ 0.52
LDLRAD3-203ENST00000528989 TVP23CQ96ET8 276 aa18.29■□□□□ 0.52
LDLRAD3-203ENST00000528989 CT45A10P0DMU9 189 aa18.28■□□□□ 0.52
LDLRAD3-203ENST00000528989 FLI1Q01543 452 aaPredicted RBP18.28■□□□□ 0.52
LDLRAD3-203ENST00000528989 Q8N1Y9 231 aa18.28■□□□□ 0.52
LDLRAD3-203ENST00000528989 NHLRC2Q8NBF2 726 aa18.28■□□□□ 0.52
LDLRAD3-203ENST00000528989 SMIM7Q9BQ49 75 aa18.28■□□□□ 0.52
LDLRAD3-203ENST00000528989 AURKAIP1Q9NWT8 199 aaPredicted RBP18.28■□□□□ 0.52
LDLRAD3-203ENST00000528989 SERTM2A0A1B0GWG4 89 aa18.27■□□□□ 0.52
LDLRAD3-203ENST00000528989 ZNF727A8MUV8 499 aa18.27■□□□□ 0.52
LDLRAD3-203ENST00000528989 NPIPB6E9PJ23 425 aa18.27■□□□□ 0.52
LDLRAD3-203ENST00000528989 H3BMM0 161 aa18.27■□□□□ 0.52
LDLRAD3-203ENST00000528989 FMC1Q96HJ9 113 aa18.27■□□□□ 0.52
LDLRAD3-203ENST00000528989 NBEAL1Q6ZS30 2694 aa18.27■□□□□ 0.51
LDLRAD3-203ENST00000528989 TMEM78Q5T7P6 136 aa18.26■□□□□ 0.51
LDLRAD3-203ENST00000528989 FAM110AQ9BQ89 295 aa18.26■□□□□ 0.51
LDLRAD3-203ENST00000528989 HLA-DRB4P13762 266 aa18.26■□□□□ 0.51
LDLRAD3-203ENST00000528989 CENPWQ5EE01 88 aa18.26■□□□□ 0.51
LDLRAD3-203ENST00000528989 Q86TA4 180 aa18.26■□□□□ 0.51
LDLRAD3-203ENST00000528989 IGF2BP2-AS1Q96M15 143 aa18.26■□□□□ 0.51
LDLRAD3-203ENST00000528989 HLA-DRB4X5D2U9 266 aa18.26■□□□□ 0.51
LDLRAD3-203ENST00000528989 CMC4P56277 68 aaPredicted RBP18.25■□□□□ 0.51
LDLRAD3-203ENST00000528989 ZNF492Q9P255 531 aa18.25■□□□□ 0.51
LDLRAD3-203ENST00000528989 F8W036 122 aa18.24■□□□□ 0.51
LDLRAD3-203ENST00000528989 LTAP01374 205 aa18.24■□□□□ 0.51
LDLRAD3-203ENST00000528989 ZNF138P52744 262 aa18.24■□□□□ 0.51
LDLRAD3-203ENST00000528989 BAGE2Q86Y30 109 aa18.24■□□□□ 0.51
LDLRAD3-203ENST00000528989 LINC00477Q96M19 166 aa18.24■□□□□ 0.51
LDLRAD3-203ENST00000528989 C8orf49Q96NF6 230 aa18.24■□□□□ 0.51
LDLRAD3-203ENST00000528989 TAS2R60P59551 318 aa18.24■□□□□ 0.51
LDLRAD3-203ENST00000528989 KIR3DS1Q14943 382 aa18.24■□□□□ 0.51
LDLRAD3-203ENST00000528989 RBMY1BA6NDE4 496 aaKnown RBP18.23■□□□□ 0.51
LDLRAD3-203ENST00000528989 RBMY1EA6NEQ0 496 aaKnown RBP18.23■□□□□ 0.51
LDLRAD3-203ENST00000528989 RBMY1DP0C7P1 496 aaKnown RBP18.23■□□□□ 0.51
LDLRAD3-203ENST00000528989 GNG4P50150 75 aa18.23■□□□□ 0.51
LDLRAD3-203ENST00000528989 J3KRW8 73 aa18.22■□□□□ 0.51
LDLRAD3-203ENST00000528989 IGLV2-8P01709 118 aa18.22■□□□□ 0.51
LDLRAD3-203ENST00000528989 STHQ8IWL8 128 aa18.22■□□□□ 0.51
LDLRAD3-203ENST00000528989 OCC1Q8TAD7 63 aa18.22■□□□□ 0.51
LDLRAD3-203ENST00000528989 PRB2P02812 416 aaPredicted RBP18.21■□□□□ 0.51
LDLRAD3-203ENST00000528989 S100A9P06702 114 aaKnown RBP18.21■□□□□ 0.51
LDLRAD3-203ENST00000528989 FXYD7P58549 80 aa18.21■□□□□ 0.51
LDLRAD3-203ENST00000528989 AMTNQ6UX39 209 aa18.21■□□□□ 0.51
LDLRAD3-203ENST00000528989 DNAH3Q8TD57 4116 aa18.21■□□□□ 0.51
LDLRAD3-203ENST00000528989 M0R2Z0 102 aa18.2■□□□□ 0.5
LDLRAD3-203ENST00000528989 DUSP14O95147 198 aaKnown RBP18.2■□□□□ 0.5
LDLRAD3-203ENST00000528989 FAM19A4Q96LR4 140 aa18.2■□□□□ 0.5
LDLRAD3-203ENST00000528989 MLST8Q9BVC4 326 aa18.2■□□□□ 0.5
LDLRAD3-203ENST00000528989 SEC11CQ9BY50 192 aa18.2■□□□□ 0.5
LDLRAD3-203ENST00000528989 TRBV6-1A0A0K0K1D8 114 aa18.2■□□□□ 0.5
LDLRAD3-203ENST00000528989 TMEM241Q24JQ0 296 aa18.2■□□□□ 0.5
LDLRAD3-203ENST00000528989 C9JCJ5 164 aa18.19■□□□□ 0.5
LDLRAD3-203ENST00000528989 K7EN84 100 aa18.19■□□□□ 0.5
LDLRAD3-203ENST00000528989 RPL35AP18077 110 aaKnown RBP18.19■□□□□ 0.5
LDLRAD3-203ENST00000528989 FAM74A3Q4VXF1 159 aa18.19■□□□□ 0.5
LDLRAD3-203ENST00000528989 TRPT1Q86TN4 253 aaKnown RBP18.19■□□□□ 0.5
LDLRAD3-203ENST00000528989 PPP1R14DQ9NXH3 145 aa18.19■□□□□ 0.5
LDLRAD3-203ENST00000528989 ZFP30Q9Y2G7 519 aa18.19■□□□□ 0.5
LDLRAD3-203ENST00000528989 OR5I1Q13606 314 aa18.18■□□□□ 0.5
LDLRAD3-203ENST00000528989 SPINK13Q1W4C9 94 aa18.18■□□□□ 0.5
LDLRAD3-203ENST00000528989 C10orf91Q5T1B1 145 aa18.18■□□□□ 0.5
LDLRAD3-203ENST00000528989 PRR9Q5T870 116 aa18.18■□□□□ 0.5
LDLRAD3-203ENST00000528989 Q6ZQT7 251 aa18.18■□□□□ 0.5
LDLRAD3-203ENST00000528989 NIPSNAP3BQ9BS92 247 aa18.18■□□□□ 0.5
LDLRAD3-203ENST00000528989 SRD5A3Q9H8P0 318 aa18.18■□□□□ 0.5
LDLRAD3-203ENST00000528989 A8MTW9 85 aa18.18■□□□□ 0.5
LDLRAD3-203ENST00000528989 LINC01551Q86U37 167 aa18.18■□□□□ 0.5
LDLRAD3-203ENST00000528989 TMEM183AQ8IXX5 376 aa18.18■□□□□ 0.5
LDLRAD3-203ENST00000528989 ZFAND2AQ8N6M9 145 aa18.18■□□□□ 0.5
LDLRAD3-203ENST00000528989 ZC2HC1AQ96GY0 325 aa18.18■□□□□ 0.5
LDLRAD3-203ENST00000528989 NAT8Q9UHE5 227 aa18.18■□□□□ 0.5
LDLRAD3-203ENST00000528989 TRAV12-2A0A075B6T6 113 aa18.17■□□□□ 0.5
LDLRAD3-203ENST00000528989 FBLL1A6NHQ2 334 aaKnown RBP18.17■□□□□ 0.5
LDLRAD3-203ENST00000528989 MGST1P10620 155 aaKnown RBP18.17■□□□□ 0.5
LDLRAD3-203ENST00000528989 SDF2L1Q9HCN8 221 aa18.17■□□□□ 0.5
LDLRAD3-203ENST00000528989 ATP6V1G1O75348 118 aa18.16■□□□□ 0.5
LDLRAD3-203ENST00000528989 ZNF80P51504 273 aaPredicted RBP18.16■□□□□ 0.5
LDLRAD3-203ENST00000528989 SAPCD1Q5SSQ6 148 aa18.16■□□□□ 0.5
LDLRAD3-203ENST00000528989 LINC00322Q6ZN03 302 aaPredicted RBP18.16■□□□□ 0.5
LDLRAD3-203ENST00000528989 KRBOX1C9JBD0 128 aa18.16■□□□□ 0.5
LDLRAD3-203ENST00000528989 CRIP1P50238 77 aa18.16■□□□□ 0.5
LDLRAD3-203ENST00000528989 RPL23P62829 140 aaKnown RBP18.16■□□□□ 0.5
LDLRAD3-203ENST00000528989 PRR27Q6MZM9 219 aa18.16■□□□□ 0.5
LDLRAD3-203ENST00000528989 NDFIP1Q9BT67 221 aa18.15■□□□□ 0.5
LDLRAD3-203ENST00000528989 ZMAT5Q9UDW3 170 aaKnown RBP18.15■□□□□ 0.5
LDLRAD3-203ENST00000528989 APOC3P02656 99 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms