RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 K7EPK0 472 aa6.16□□□□□ -1.42
SSBP3-212ENST00000528930 CCSO14618 274 aa6.16□□□□□ -1.42
SSBP3-212ENST00000528930 MBPP02686 304 aaPredicted RBP6.16□□□□□ -1.42
SSBP3-212ENST00000528930 METTL15P1P0C7V9 234 aa6.16□□□□□ -1.42
SSBP3-212ENST00000528930 ZNF688P0C7X2 276 aa6.16□□□□□ -1.42
SSBP3-212ENST00000528930 GATA2P23769 480 aaPredicted RBP6.16□□□□□ -1.42
SSBP3-212ENST00000528930 RPL12P30050 165 aaKnown RBP6.16□□□□□ -1.42
SSBP3-212ENST00000528930 TAS2R30P59541 319 aa6.16□□□□□ -1.42
SSBP3-212ENST00000528930 LYZP61626 148 aa6.16□□□□□ -1.42
SSBP3-212ENST00000528930 NUTF2P61970 127 aaKnown RBP6.16□□□□□ -1.42
SSBP3-212ENST00000528930 RPL7L1Q6DKI1 246 aaKnown RBP6.16□□□□□ -1.42
SSBP3-212ENST00000528930 SIGLEC15Q6ZMC9 328 aa6.16□□□□□ -1.42
SSBP3-212ENST00000528930 TMEM144Q7Z5S9 345 aa6.16□□□□□ -1.42
SSBP3-212ENST00000528930 RAB40CQ96S21 281 aa6.16□□□□□ -1.42
SSBP3-212ENST00000528930 CTDSP1Q9GZU7 261 aa6.16□□□□□ -1.42
SSBP3-212ENST00000528930 C11orf1Q9H5F2 150 aa6.16□□□□□ -1.42
SSBP3-212ENST00000528930 GSKIPQ9P0R6 139 aa6.16□□□□□ -1.42
SSBP3-212ENST00000528930 VAX2Q9UIW0 290 aa6.16□□□□□ -1.42
SSBP3-212ENST00000528930 PLA2G2DQ9UNK4 145 aa6.16□□□□□ -1.42
SSBP3-212ENST00000528930 KNCNA6PVL3 124 aa6.15□□□□□ -1.42
SSBP3-212ENST00000528930 M0R036 132 aa6.15□□□□□ -1.42
SSBP3-212ENST00000528930 TCAPO15273 167 aa6.15□□□□□ -1.42
SSBP3-212ENST00000528930 SCGB1D2O95969 90 aa6.15□□□□□ -1.42
SSBP3-212ENST00000528930 GIG44P09565 113 aaPredicted RBP6.15□□□□□ -1.42
SSBP3-212ENST00000528930 EWSR1Q01844 656 aaKnown RBP eCLIP6.15□□□□□ -1.42
SSBP3-212ENST00000528930 ARL16Q0P5N6 197 aa6.15□□□□□ -1.42
SSBP3-212ENST00000528930 LRRC37A5PQ49AS3 106 aa6.15□□□□□ -1.42
SSBP3-212ENST00000528930 TRPT1Q86TN4 253 aaKnown RBP6.15□□□□□ -1.42
SSBP3-212ENST00000528930 C17orf77Q96MU5 243 aa6.15□□□□□ -1.42
SSBP3-212ENST00000528930 SEPSECSQ9HD40 501 aaKnown RBP6.15□□□□□ -1.42
SSBP3-212ENST00000528930 NRN1Q9NPD7 142 aa6.15□□□□□ -1.42
SSBP3-212ENST00000528930 A0A0J9YWU9 116 aa6.14□□□□□ -1.43
SSBP3-212ENST00000528930 A0A1B0GV90 55 aa6.14□□□□□ -1.43
SSBP3-212ENST00000528930 FNDC10F2Z333 226 aa6.14□□□□□ -1.43
SSBP3-212ENST00000528930 SOCS3O14543 225 aa6.14□□□□□ -1.43
SSBP3-212ENST00000528930 CA1P00915 261 aaPredicted RBP6.14□□□□□ -1.43
SSBP3-212ENST00000528930 HBE1P02100 147 aa6.14□□□□□ -1.43
SSBP3-212ENST00000528930 LINC00614P0C842 121 aa6.14□□□□□ -1.43
SSBP3-212ENST00000528930 RPS10P46783 165 aaKnown RBP6.14□□□□□ -1.43
SSBP3-212ENST00000528930 RAB32Q13637 225 aa6.14□□□□□ -1.43
SSBP3-212ENST00000528930 ELOBQ15370 118 aa6.14□□□□□ -1.43
SSBP3-212ENST00000528930 KHDC3LQ587J8 217 aa6.14□□□□□ -1.43
SSBP3-212ENST00000528930 PSMG4Q5JS54 123 aa6.14□□□□□ -1.43
SSBP3-212ENST00000528930 ZNF506Q5JVG8 444 aa6.14□□□□□ -1.43
SSBP3-212ENST00000528930 C1orf194Q5T5A4 169 aa6.14□□□□□ -1.43
SSBP3-212ENST00000528930 STHQ8IWL8 128 aa6.14□□□□□ -1.43
SSBP3-212ENST00000528930 BTF3L4Q96K17 158 aa6.14□□□□□ -1.43
SSBP3-212ENST00000528930 PYGO2Q9BRQ0 406 aa6.14□□□□□ -1.43
SSBP3-212ENST00000528930 NPVFQ9HCQ7 196 aa6.14□□□□□ -1.43
SSBP3-212ENST00000528930 OR5AC2Q9NZP5 309 aa6.14□□□□□ -1.43
SSBP3-212ENST00000528930 SLC45A2Q9UMX9 530 aa6.14□□□□□ -1.43
SSBP3-212ENST00000528930 SMCO3A2RU48 225 aa6.13□□□□□ -1.43
SSBP3-212ENST00000528930 RBFOX3A6NFN3 312 aa6.13□□□□□ -1.43
SSBP3-212ENST00000528930 PHOX2AO14813 284 aa6.13□□□□□ -1.43
SSBP3-212ENST00000528930 HIST1H2BKO60814 126 aa6.13□□□□□ -1.43
SSBP3-212ENST00000528930 PLA2G1BP04054 148 aaKnown RBP6.13□□□□□ -1.43
SSBP3-212ENST00000528930 HIST1H2BJP06899 126 aa6.13□□□□□ -1.43
SSBP3-212ENST00000528930 ORM2P19652 201 aa6.13□□□□□ -1.43
SSBP3-212ENST00000528930 HIST1H2BOP23527 126 aa6.13□□□□□ -1.43
SSBP3-212ENST00000528930 HIST1H2BBP33778 126 aa6.13□□□□□ -1.43
SSBP3-212ENST00000528930 CAMLGP49069 296 aa6.13□□□□□ -1.43
SSBP3-212ENST00000528930 NDUFA6P56556 154 aa6.13□□□□□ -1.43
SSBP3-212ENST00000528930 HIST1H2BDP58876 126 aa6.13□□□□□ -1.43
SSBP3-212ENST00000528930 PLP1P60201 277 aa6.13□□□□□ -1.43
SSBP3-212ENST00000528930 HIST1H2BCP62807 126 aa6.13□□□□□ -1.43
SSBP3-212ENST00000528930 HIST2H2BEQ16778 126 aa6.13□□□□□ -1.43
SSBP3-212ENST00000528930 ACTL10Q5JWF8 245 aa6.13□□□□□ -1.43
SSBP3-212ENST00000528930 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.13□□□□□ -1.43
SSBP3-212ENST00000528930 CYP2G1PQ6ZSU1 146 aa6.13□□□□□ -1.43
SSBP3-212ENST00000528930 OR10P1Q8NGE3 313 aa6.13□□□□□ -1.43
SSBP3-212ENST00000528930 OR10D4PQ8NGN7 298 aa6.13□□□□□ -1.43
SSBP3-212ENST00000528930 HIST1H2BHQ93079 126 aa6.13□□□□□ -1.43
SSBP3-212ENST00000528930 TVP23CQ96ET8 276 aa6.13□□□□□ -1.43
SSBP3-212ENST00000528930 HIST1H2BNQ99877 126 aa6.13□□□□□ -1.43
SSBP3-212ENST00000528930 HIST1H2BMQ99879 126 aa6.13□□□□□ -1.43
SSBP3-212ENST00000528930 RARRES2Q99969 163 aa6.13□□□□□ -1.43
SSBP3-212ENST00000528930 EIF5A2Q9GZV4 153 aaKnown RBP6.13□□□□□ -1.43
SSBP3-212ENST00000528930 FBXL17Q9UF56 701 aa6.13□□□□□ -1.43
SSBP3-212ENST00000528930 LSM5Q9Y4Y9 91 aaKnown RBP6.13□□□□□ -1.43
SSBP3-212ENST00000528930 FAM24AA6NFZ4 105 aa6.12□□□□□ -1.43
SSBP3-212ENST00000528930 EPM2AB3EWF7 344 aa6.12□□□□□ -1.43
SSBP3-212ENST00000528930 H3BMM0 161 aa6.12□□□□□ -1.43
SSBP3-212ENST00000528930 SRP19P09132 144 aaKnown RBP6.12□□□□□ -1.43
SSBP3-212ENST00000528930 TAGLN2P37802 199 aaKnown RBP6.12□□□□□ -1.43
SSBP3-212ENST00000528930 DEFB1P60022 68 aa6.12□□□□□ -1.43
SSBP3-212ENST00000528930 SNRPD3P62318 126 aaKnown RBP6.12□□□□□ -1.43
SSBP3-212ENST00000528930 ZNF266Q14584 549 aa6.12□□□□□ -1.43
SSBP3-212ENST00000528930 AKR1C8PQ5T2L2 129 aa6.12□□□□□ -1.43
SSBP3-212ENST00000528930 GDF5OSQ5U4N7 250 aa6.12□□□□□ -1.43
SSBP3-212ENST00000528930 MORN3Q6PF18 240 aaPredicted RBP6.12□□□□□ -1.43
SSBP3-212ENST00000528930 PATE2Q6UY27 113 aa6.12□□□□□ -1.43
SSBP3-212ENST00000528930 TMEM183AQ8IXX5 376 aa6.12□□□□□ -1.43
SSBP3-212ENST00000528930 OR8I2Q8N0Y5 310 aa6.12□□□□□ -1.43
SSBP3-212ENST00000528930 CSNK1G2-AS1Q8NCQ2 148 aa6.12□□□□□ -1.43
SSBP3-212ENST00000528930 OR1B1Q8NGR6 318 aa6.12□□□□□ -1.43
SSBP3-212ENST00000528930 OR11H2Q8NH07 326 aa6.12□□□□□ -1.43
SSBP3-212ENST00000528930 GNPNAT1Q96EK6 184 aaPredicted RBP6.12□□□□□ -1.43
SSBP3-212ENST00000528930 IMMP2LQ96T52 175 aa6.12□□□□□ -1.43
SSBP3-212ENST00000528930 H3BQ15 152 aa6.11□□□□□ -1.43
SSBP3-212ENST00000528930 H3BRN7 92 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms