RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 ZNF493Q6ZR52 646 aa10.15□□□□□ -0.78
CAPN1-216ENST00000528739 HSD17B11Q8NBQ5 300 aa10.15□□□□□ -0.78
CAPN1-216ENST00000528739 INO80EQ8NBZ0 244 aaPredicted RBP10.15□□□□□ -0.78
CAPN1-216ENST00000528739 TMEM263Q8WUH6 116 aaKnown RBP10.15□□□□□ -0.78
CAPN1-216ENST00000528739 PHYHIPLQ96FC7 376 aa10.15□□□□□ -0.78
CAPN1-216ENST00000528739 ODF3Q96PU9 254 aa10.15□□□□□ -0.78
CAPN1-216ENST00000528739 AGPAT4-IT1Q9H0P7 198 aa10.15□□□□□ -0.78
CAPN1-216ENST00000528739 RPH3ALQ9UNE2 315 aa10.15□□□□□ -0.78
CAPN1-216ENST00000528739 FXYD6-FXYD2A0A087WZ82 144 aa10.14□□□□□ -0.79
CAPN1-216ENST00000528739 C7orf71A4D174 169 aa10.14□□□□□ -0.79
CAPN1-216ENST00000528739 HMGB3O15347 200 aaKnown RBP10.14□□□□□ -0.79
CAPN1-216ENST00000528739 GIPP09681 153 aaPredicted RBP10.14□□□□□ -0.79
CAPN1-216ENST00000528739 M6PRP20645 277 aa10.14□□□□□ -0.79
CAPN1-216ENST00000528739 TMEM88Q6PEY1 159 aa10.14□□□□□ -0.79
CAPN1-216ENST00000528739 OR10G4Q8NGN3 311 aa10.14□□□□□ -0.79
CAPN1-216ENST00000528739 OR10G9Q8NGN4 311 aa10.14□□□□□ -0.79
CAPN1-216ENST00000528739 OR10G7Q8NGN6 311 aa10.14□□□□□ -0.79
CAPN1-216ENST00000528739 FAM210BQ96KR6 192 aa10.14□□□□□ -0.79
CAPN1-216ENST00000528739 VGLL1Q99990 258 aa10.14□□□□□ -0.79
CAPN1-216ENST00000528739 Q9H3A6 140 aa10.14□□□□□ -0.79
CAPN1-216ENST00000528739 CBY3A6NI87 242 aa10.13□□□□□ -0.79
CAPN1-216ENST00000528739 ATP5G1P05496 136 aa10.13□□□□□ -0.79
CAPN1-216ENST00000528739 ATP5G3P48201 142 aa10.13□□□□□ -0.79
CAPN1-216ENST00000528739 RAB2AP61019 212 aa10.13□□□□□ -0.79
CAPN1-216ENST00000528739 BTN1A1Q13410 526 aa10.13□□□□□ -0.79
CAPN1-216ENST00000528739 FAM74A1Q5RGS3 127 aa10.13□□□□□ -0.79
CAPN1-216ENST00000528739 CMTM2Q8TAZ6 248 aa10.13□□□□□ -0.79
CAPN1-216ENST00000528739 PYGO2Q9BRQ0 406 aa10.13□□□□□ -0.79
CAPN1-216ENST00000528739 GAGE12BA1L429 117 aa10.12□□□□□ -0.79
CAPN1-216ENST00000528739 PLAC8L1A1L4L8 177 aa10.12□□□□□ -0.79
CAPN1-216ENST00000528739 PGPA6NDG6 321 aa10.12□□□□□ -0.79
CAPN1-216ENST00000528739 RGS13O14921 159 aa10.12□□□□□ -0.79
CAPN1-216ENST00000528739 GAGE7O76087 117 aa10.12□□□□□ -0.79
CAPN1-216ENST00000528739 GAGE12FP0CL80 117 aa10.12□□□□□ -0.79
CAPN1-216ENST00000528739 GAGE12GP0CL81 117 aa10.12□□□□□ -0.79
CAPN1-216ENST00000528739 GAGE12IP0CL82 117 aa10.12□□□□□ -0.79
CAPN1-216ENST00000528739 CD300CQ08708 224 aa10.12□□□□□ -0.79
CAPN1-216ENST00000528739 Q5BKY6 102 aa10.12□□□□□ -0.79
CAPN1-216ENST00000528739 C9orf47Q6ZRZ4 202 aa10.12□□□□□ -0.79
CAPN1-216ENST00000528739 LYPD1Q8N2G4 141 aa10.12□□□□□ -0.79
CAPN1-216ENST00000528739 RNASE8Q8TDE3 154 aaKnown RBP10.12□□□□□ -0.79
CAPN1-216ENST00000528739 ZNF503Q96F45 646 aa10.12□□□□□ -0.79
CAPN1-216ENST00000528739 AQP10Q96PS8 301 aa10.12□□□□□ -0.79
CAPN1-216ENST00000528739 NUDT3O95989 172 aa10.11□□□□□ -0.79
CAPN1-216ENST00000528739 CDC34P49427 236 aaPredicted RBP10.11□□□□□ -0.79
CAPN1-216ENST00000528739 ZNF138P52744 262 aa10.11□□□□□ -0.79
CAPN1-216ENST00000528739 OR5I1Q13606 314 aa10.11□□□□□ -0.79
CAPN1-216ENST00000528739 PQLC2Q6ZP29 291 aa10.11□□□□□ -0.79
CAPN1-216ENST00000528739 POM121L12Q8N7R1 296 aa10.11□□□□□ -0.79
CAPN1-216ENST00000528739 OR2T35Q8NGX2 323 aa10.11□□□□□ -0.79
CAPN1-216ENST00000528739 Q8TAT8 98 aa10.11□□□□□ -0.79
CAPN1-216ENST00000528739 RXFP4Q8TDU9 374 aa10.11□□□□□ -0.79
CAPN1-216ENST00000528739 ASB13Q8WXK3 278 aa10.11□□□□□ -0.79
CAPN1-216ENST00000528739 ATG101Q9BSB4 218 aa10.11□□□□□ -0.79
CAPN1-216ENST00000528739 ZNF492Q9P255 531 aa10.11□□□□□ -0.79
CAPN1-216ENST00000528739 BORCS7-ASMTA0A0B4J1R7 106 aa10.1□□□□□ -0.79
CAPN1-216ENST00000528739 M0R2N4 97 aa10.1□□□□□ -0.79
CAPN1-216ENST00000528739 ATP6V0CP27449 155 aa10.1□□□□□ -0.79
CAPN1-216ENST00000528739 IQCF2Q8IXL9 164 aa10.1□□□□□ -0.79
CAPN1-216ENST00000528739 C15orf53Q8NAA6 179 aa10.1□□□□□ -0.79
CAPN1-216ENST00000528739 KLLNB2CW77 178 aa10.09□□□□□ -0.79
CAPN1-216ENST00000528739 MBP02144 154 aa10.09□□□□□ -0.79
CAPN1-216ENST00000528739 EIF4E3Q8N5X7 224 aaKnown RBP10.09□□□□□ -0.79
CAPN1-216ENST00000528739 ARPC5LQ9BPX5 153 aa10.09□□□□□ -0.79
CAPN1-216ENST00000528739 OTORQ9NRC9 128 aa10.09□□□□□ -0.79
CAPN1-216ENST00000528739 GSN-AS1Q9NRJ2 163 aa10.09□□□□□ -0.79
CAPN1-216ENST00000528739 IGLV2-18A0A075B6J9 118 aa10.08□□□□□ -0.8
CAPN1-216ENST00000528739 TRGV2A0A075B6R0 118 aa10.08□□□□□ -0.8
CAPN1-216ENST00000528739 DIRC3C9JPN6 131 aa10.08□□□□□ -0.8
CAPN1-216ENST00000528739 ZNF324O75467 553 aaPredicted RBP10.08□□□□□ -0.8
CAPN1-216ENST00000528739 ARL14EPLP0DKL9 152 aa10.08□□□□□ -0.8
CAPN1-216ENST00000528739 CRISP2P16562 243 aa10.08□□□□□ -0.8
CAPN1-216ENST00000528739 ZNF680Q8NEM1 530 aa10.08□□□□□ -0.8
CAPN1-216ENST00000528739 FAM19A4Q96LR4 140 aa10.08□□□□□ -0.8
CAPN1-216ENST00000528739 SH3BGRL3Q9H299 93 aa10.08□□□□□ -0.8
CAPN1-216ENST00000528739 TRGV1A0A0A0MS02 117 aa10.07□□□□□ -0.8
CAPN1-216ENST00000528739 RBAKDNA6NC62 111 aa10.07□□□□□ -0.8
CAPN1-216ENST00000528739 NMBP08949 121 aa10.07□□□□□ -0.8
CAPN1-216ENST00000528739 SERF2P84101 59 aa10.07□□□□□ -0.8
CAPN1-216ENST00000528739 RPL7L1Q6DKI1 246 aaKnown RBP10.07□□□□□ -0.8
CAPN1-216ENST00000528739 GOLT1AQ6ZVE7 132 aa10.07□□□□□ -0.8
CAPN1-216ENST00000528739 ZFAND2AQ8N6M9 145 aa10.07□□□□□ -0.8
CAPN1-216ENST00000528739 OR2G3Q8NGZ4 309 aa10.07□□□□□ -0.8
CAPN1-216ENST00000528739 RAB24Q969Q5 203 aa10.07□□□□□ -0.8
CAPN1-216ENST00000528739 PSMG3Q9BT73 122 aaPredicted RBP10.07□□□□□ -0.8
CAPN1-216ENST00000528739 ACTR3CQ9C0K3 210 aaPredicted RBP10.07□□□□□ -0.8
CAPN1-216ENST00000528739 TNFSF18Q9UNG2 199 aa10.07□□□□□ -0.8
CAPN1-216ENST00000528739 IGHV1OR15-1A0A075B7D0 117 aa10.06□□□□□ -0.8
CAPN1-216ENST00000528739 A0A0J9YY99 117 aa10.06□□□□□ -0.8
CAPN1-216ENST00000528739 ARPC5O15511 151 aa10.06□□□□□ -0.8
CAPN1-216ENST00000528739 MUC21Q5SSG8 566 aa10.06□□□□□ -0.8
CAPN1-216ENST00000528739 PRR9Q5T870 116 aa10.06□□□□□ -0.8
CAPN1-216ENST00000528739 GNPNAT1Q96EK6 184 aaPredicted RBP10.06□□□□□ -0.8
CAPN1-216ENST00000528739 NAGKQ9UJ70 344 aa10.06□□□□□ -0.8
CAPN1-216ENST00000528739 TP53TG3Q9ULZ0 132 aa10.06□□□□□ -0.8
CAPN1-216ENST00000528739 KMT2AQ03164 3969 aa10.06□□□□□ -0.8
CAPN1-216ENST00000528739 RNF222A6NCQ9 220 aa10.05□□□□□ -0.8
CAPN1-216ENST00000528739 GNG5P63218 68 aa10.05□□□□□ -0.8
CAPN1-216ENST00000528739 DAZ2Q13117 558 aaKnown RBP10.05□□□□□ -0.8
CAPN1-216ENST00000528739 ANXA2RQ3ZCQ2 193 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms