RNA–Protein interactions for RNA: ENST00000525617.2

LRRK1-204, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-204ENST00000525617 PRM2P04554 102 aa10.28□□□□□ -0.76
LRRK1-204ENST00000525617 AZU1P20160 251 aa10.28□□□□□ -0.76
LRRK1-204ENST00000525617 KIR3DS1Q14943 382 aa10.28□□□□□ -0.76
LRRK1-204ENST00000525617 RPL7L1Q6DKI1 246 aaKnown RBP10.28□□□□□ -0.76
LRRK1-204ENST00000525617 CMTM2Q8TAZ6 248 aa10.28□□□□□ -0.76
LRRK1-204ENST00000525617 RXFP4Q8TDU9 374 aa10.28□□□□□ -0.76
LRRK1-204ENST00000525617 IGHV4-4A0A075B6R2 117 aa10.27□□□□□ -0.77
LRRK1-204ENST00000525617 TRAV12-3A0A0B4J271 114 aa10.27□□□□□ -0.77
LRRK1-204ENST00000525617 RBAKDNA6NC62 111 aa10.27□□□□□ -0.77
LRRK1-204ENST00000525617 HMGB3O15347 200 aaKnown RBP10.27□□□□□ -0.77
LRRK1-204ENST00000525617 EIF3GO75821 320 aaKnown RBP eCLIP10.27□□□□□ -0.77
LRRK1-204ENST00000525617 GPX1P07203 203 aa10.27□□□□□ -0.77
LRRK1-204ENST00000525617 LGALS9CQ6DKI2 356 aa10.27□□□□□ -0.77
LRRK1-204ENST00000525617 TMEM263Q8WUH6 116 aaKnown RBP10.27□□□□□ -0.77
LRRK1-204ENST00000525617 PYGO2Q9BRQ0 406 aa10.27□□□□□ -0.77
LRRK1-204ENST00000525617 PLA2G2EQ9NZK7 142 aa10.27□□□□□ -0.77
LRRK1-204ENST00000525617 TIMM8BQ9Y5J9 83 aaPredicted RBP10.27□□□□□ -0.77
LRRK1-204ENST00000525617 C7orf71A4D174 169 aa10.26□□□□□ -0.77
LRRK1-204ENST00000525617 PGPA6NDG6 321 aa10.26□□□□□ -0.77
LRRK1-204ENST00000525617 G3V3Q6 166 aa10.26□□□□□ -0.77
LRRK1-204ENST00000525617 NMBP08949 121 aa10.26□□□□□ -0.77
LRRK1-204ENST00000525617 ZNF138P52744 262 aa10.26□□□□□ -0.77
LRRK1-204ENST00000525617 RAB24Q969Q5 203 aa10.26□□□□□ -0.77
LRRK1-204ENST00000525617 FAM19A4Q96LR4 140 aa10.26□□□□□ -0.77
LRRK1-204ENST00000525617 HYLS1Q96M11 299 aa10.26□□□□□ -0.77
LRRK1-204ENST00000525617 VGLL1Q99990 258 aa10.26□□□□□ -0.77
LRRK1-204ENST00000525617 ACTR3CQ9C0K3 210 aaPredicted RBP10.26□□□□□ -0.77
LRRK1-204ENST00000525617 SH3BGRL3Q9H299 93 aa10.26□□□□□ -0.77
LRRK1-204ENST00000525617 OTORQ9NRC9 128 aa10.26□□□□□ -0.77
LRRK1-204ENST00000525617 ZNF492Q9P255 531 aa10.26□□□□□ -0.77
LRRK1-204ENST00000525617 APLNQ9ULZ1 77 aa10.26□□□□□ -0.77
LRRK1-204ENST00000525617 KLLNB2CW77 178 aa10.25□□□□□ -0.77
LRRK1-204ENST00000525617 STAG3L2P0CL84 134 aa10.25□□□□□ -0.77
LRRK1-204ENST00000525617 STAG3L3P0CL85 134 aa10.25□□□□□ -0.77
LRRK1-204ENST00000525617 ARL14EPLP0DKL9 152 aa10.25□□□□□ -0.77
LRRK1-204ENST00000525617 DEFB130BP0DP73 79 aa10.25□□□□□ -0.77
LRRK1-204ENST00000525617 DEFB130AP0DP74 79 aa10.25□□□□□ -0.77
LRRK1-204ENST00000525617 HTN3P15516 51 aa10.25□□□□□ -0.77
LRRK1-204ENST00000525617 CRISP2P16562 243 aa10.25□□□□□ -0.77
LRRK1-204ENST00000525617 RNASE4P34096 147 aaKnown RBP10.25□□□□□ -0.77
LRRK1-204ENST00000525617 FAM210BQ96KR6 192 aa10.25□□□□□ -0.77
LRRK1-204ENST00000525617 NDUFAF3Q9BU61 184 aa10.25□□□□□ -0.77
LRRK1-204ENST00000525617 KMT2CQ8NEZ4 4911 aaKnown RBP10.24□□□□□ -0.77
LRRK1-204ENST00000525617 TRBV7-9A0A0J9YWB2 115 aa10.24□□□□□ -0.77
LRRK1-204ENST00000525617 PLAC8L1A1L4L8 177 aa10.24□□□□□ -0.77
LRRK1-204ENST00000525617 DIRC3C9JPN6 131 aa10.24□□□□□ -0.77
LRRK1-204ENST00000525617 SMLR1H3BR10 107 aa10.24□□□□□ -0.77
LRRK1-204ENST00000525617 CXorf1O96002 111 aa10.24□□□□□ -0.77
LRRK1-204ENST00000525617 ARL6IP6Q8N6S5 226 aa10.24□□□□□ -0.77
LRRK1-204ENST00000525617 RNASE8Q8TDE3 154 aaKnown RBP10.24□□□□□ -0.77
LRRK1-204ENST00000525617 RPH3ALQ9UNE2 315 aa10.24□□□□□ -0.77
LRRK1-204ENST00000525617 SNURFLB1AK76 121 aa10.23□□□□□ -0.77
LRRK1-204ENST00000525617 GCHFRP30047 84 aa10.23□□□□□ -0.77
LRRK1-204ENST00000525617 CD300CQ08708 224 aa10.23□□□□□ -0.77
LRRK1-204ENST00000525617 BTN1A1Q13410 526 aa10.23□□□□□ -0.77
LRRK1-204ENST00000525617 AKR1C8PQ5T2L2 129 aa10.23□□□□□ -0.77
LRRK1-204ENST00000525617 ZFAND2AQ8N6M9 145 aa10.23□□□□□ -0.77
LRRK1-204ENST00000525617 NOP10Q9NPE3 64 aaKnown RBP10.23□□□□□ -0.77
LRRK1-204ENST00000525617 TMEM167BQ9NRX6 74 aa10.23□□□□□ -0.77
LRRK1-204ENST00000525617 LENEPQ9Y5L5 61 aa10.23□□□□□ -0.77
LRRK1-204ENST00000525617 STARD9Q9P2P6 4700 aa10.22□□□□□ -0.77
LRRK1-204ENST00000525617 HMSDA8MTL9 139 aa10.22□□□□□ -0.77
LRRK1-204ENST00000525617 RGS13O14921 159 aa10.22□□□□□ -0.77
LRRK1-204ENST00000525617 ZNF345Q14585 488 aa10.22□□□□□ -0.77
LRRK1-204ENST00000525617 IQCF2Q8IXL9 164 aa10.22□□□□□ -0.77
LRRK1-204ENST00000525617 ZNF680Q8NEM1 530 aa10.22□□□□□ -0.77
LRRK1-204ENST00000525617 Q8TAT8 98 aa10.22□□□□□ -0.77
LRRK1-204ENST00000525617 ARPC5LQ9BPX5 153 aa10.22□□□□□ -0.77
LRRK1-204ENST00000525617 A0A0D9SG52 128 aa10.21□□□□□ -0.77
LRRK1-204ENST00000525617 CTXND1A0A1B0GTU2 59 aa10.21□□□□□ -0.77
LRRK1-204ENST00000525617 CBY3A6NI87 242 aa10.21□□□□□ -0.77
LRRK1-204ENST00000525617 ZNF324O75467 553 aaPredicted RBP10.21□□□□□ -0.77
LRRK1-204ENST00000525617 ATP5G1P05496 136 aa10.21□□□□□ -0.77
LRRK1-204ENST00000525617 ATP5G3P48201 142 aa10.21□□□□□ -0.77
LRRK1-204ENST00000525617 KCNRGQ8N5I3 272 aa10.21□□□□□ -0.77
LRRK1-204ENST00000525617 EIF4E3Q8N5X7 224 aaKnown RBP10.21□□□□□ -0.77
LRRK1-204ENST00000525617 TMED6Q8WW62 240 aa10.21□□□□□ -0.77
LRRK1-204ENST00000525617 ST6GAL2Q96JF0 529 aa10.21□□□□□ -0.77
LRRK1-204ENST00000525617 LINC00467Q9BRT7 94 aa10.21□□□□□ -0.77
LRRK1-204ENST00000525617 SERTM2A0A1B0GWG4 89 aa10.2□□□□□ -0.78
LRRK1-204ENST00000525617 K7EQM0 130 aa10.2□□□□□ -0.78
LRRK1-204ENST00000525617 ANXA2RQ3ZCQ2 193 aa10.2□□□□□ -0.78
LRRK1-204ENST00000525617 GOLT1AQ6ZVE7 132 aa10.2□□□□□ -0.78
LRRK1-204ENST00000525617 C5orf17Q8NAS9 161 aa10.2□□□□□ -0.78
LRRK1-204ENST00000525617 SUN5Q8TC36 379 aa10.2□□□□□ -0.78
LRRK1-204ENST00000525617 CYTL1Q9NRR1 136 aa10.2□□□□□ -0.78
LRRK1-204ENST00000525617 KANTRA0A1W2PQU2 76 aa10.19□□□□□ -0.78
LRRK1-204ENST00000525617 F5H768 121 aa10.19□□□□□ -0.78
LRRK1-204ENST00000525617 P0DMU3 169 aa10.19□□□□□ -0.78
LRRK1-204ENST00000525617 FAM231AP0DMU4 169 aa10.19□□□□□ -0.78
LRRK1-204ENST00000525617 FAM231CP0DMU5 169 aa10.19□□□□□ -0.78
LRRK1-204ENST00000525617 SUMO1P63165 101 aaKnown RBP10.19□□□□□ -0.78
LRRK1-204ENST00000525617 PRR9Q5T870 116 aa10.19□□□□□ -0.78
LRRK1-204ENST00000525617 OR11H4Q8NGC9 324 aa10.19□□□□□ -0.78
LRRK1-204ENST00000525617 IGHV1OR15-1A0A075B7D0 117 aa10.18□□□□□ -0.78
LRRK1-204ENST00000525617 GAGE12BA1L429 117 aa10.18□□□□□ -0.78
LRRK1-204ENST00000525617 GAGE7O76087 117 aa10.18□□□□□ -0.78
LRRK1-204ENST00000525617 GAGE12FP0CL80 117 aa10.18□□□□□ -0.78
LRRK1-204ENST00000525617 GAGE12GP0CL81 117 aa10.18□□□□□ -0.78
LRRK1-204ENST00000525617 GAGE12IP0CL82 117 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms