RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 LENEPQ9Y5L5 61 aa13.7□□□□□ -0.22
PTPRK-218ENST00000525459 PAGE4O60829 102 aa13.69□□□□□ -0.22
PTPRK-218ENST00000525459 LEPP41159 167 aa13.69□□□□□ -0.22
PTPRK-218ENST00000525459 CDKN1BP46527 198 aa13.69□□□□□ -0.22
PTPRK-218ENST00000525459 DEFB135Q30KP9 77 aa13.69□□□□□ -0.22
PTPRK-218ENST00000525459 CST9LP1Q5W188 147 aa13.69□□□□□ -0.22
PTPRK-218ENST00000525459 RCHY1Q96PM5 261 aa13.69□□□□□ -0.22
PTPRK-218ENST00000525459 ASCL2Q99929 193 aa13.69□□□□□ -0.22
PTPRK-218ENST00000525459 SLC35B3Q9H1N7 401 aa13.69□□□□□ -0.22
PTPRK-218ENST00000525459 RPH3ALQ9UNE2 315 aa13.69□□□□□ -0.22
PTPRK-218ENST00000525459 NMBP08949 121 aa13.68□□□□□ -0.22
PTPRK-218ENST00000525459 GOLT1AQ6ZVE7 132 aa13.68□□□□□ -0.22
PTPRK-218ENST00000525459 LYPD6BQ8NI32 183 aa13.68□□□□□ -0.22
PTPRK-218ENST00000525459 RNF183Q96D59 192 aa13.68□□□□□ -0.22
PTPRK-218ENST00000525459 GNG13Q9P2W3 67 aa13.68□□□□□ -0.22
PTPRK-218ENST00000525459 GIG44P09565 113 aaPredicted RBP13.67□□□□□ -0.22
PTPRK-218ENST00000525459 ZNF138P52744 262 aa13.67□□□□□ -0.22
PTPRK-218ENST00000525459 CCDC28AQ8IWP9 274 aa13.67□□□□□ -0.22
PTPRK-218ENST00000525459 IGF2BP2-AS1Q96M15 143 aa13.67□□□□□ -0.22
PTPRK-218ENST00000525459 C20orf144Q9BQM9 153 aa13.67□□□□□ -0.22
PTPRK-218ENST00000525459 AGPAT4-IT1Q9H0P7 198 aa13.67□□□□□ -0.22
PTPRK-218ENST00000525459 ZNF492Q9P255 531 aa13.67□□□□□ -0.22
PTPRK-218ENST00000525459 SPRY2O43597 315 aa13.67□□□□□ -0.22
PTPRK-218ENST00000525459 INSP01308 110 aa13.67□□□□□ -0.22
PTPRK-218ENST00000525459 SPINK13Q1W4C9 94 aa13.67□□□□□ -0.22
PTPRK-218ENST00000525459 TMEM75Q8N9X5 138 aa13.67□□□□□ -0.22
PTPRK-218ENST00000525459 VGLL1Q99990 258 aa13.67□□□□□ -0.22
PTPRK-218ENST00000525459 XCL2Q9UBD3 114 aa13.67□□□□□ -0.22
PTPRK-218ENST00000525459 C11orf94C9JXX5 98 aa13.66□□□□□ -0.22
PTPRK-218ENST00000525459 PEX7O00628 323 aa13.66□□□□□ -0.22
PTPRK-218ENST00000525459 CT45A10P0DMU9 189 aa13.66□□□□□ -0.22
PTPRK-218ENST00000525459 CRISP2P16562 243 aa13.66□□□□□ -0.22
PTPRK-218ENST00000525459 GNG5P63218 68 aa13.66□□□□□ -0.22
PTPRK-218ENST00000525459 CSNK1G2-AS1Q8NCQ2 148 aa13.66□□□□□ -0.22
PTPRK-218ENST00000525459 FAM19A4Q96LR4 140 aa13.66□□□□□ -0.22
PTPRK-218ENST00000525459 M0R2Z0 102 aa13.65□□□□□ -0.22
PTPRK-218ENST00000525459 CCL20P78556 96 aa13.65□□□□□ -0.22
PTPRK-218ENST00000525459 ERCC8Q13216 396 aa13.65□□□□□ -0.22
PTPRK-218ENST00000525459 NDFIP1Q9BT67 221 aa13.65□□□□□ -0.22
PTPRK-218ENST00000525459 GOLT1BQ9Y3E0 138 aa13.65□□□□□ -0.22
PTPRK-218ENST00000525459 BCL2P10415 239 aa13.64□□□□□ -0.23
PTPRK-218ENST00000525459 ATP5G3P48201 142 aa13.64□□□□□ -0.23
PTPRK-218ENST00000525459 MEF2BQ02080 365 aaPredicted RBP13.64□□□□□ -0.23
PTPRK-218ENST00000525459 TMEM256Q8N2U0 113 aa13.64□□□□□ -0.23
PTPRK-218ENST00000525459 OVOL2Q9BRP0 275 aa13.64□□□□□ -0.23
PTPRK-218ENST00000525459 PRKDCP78527 4128 aaKnown RBP13.64□□□□□ -0.23
PTPRK-218ENST00000525459 PRB4P10163 310 aaPredicted RBP13.64□□□□□ -0.23
PTPRK-218ENST00000525459 FXYD7P58549 80 aa13.64□□□□□ -0.23
PTPRK-218ENST00000525459 FLI1Q01543 452 aaPredicted RBP13.63□□□□□ -0.23
PTPRK-218ENST00000525459 ZNF767PQ75MW2 155 aa13.63□□□□□ -0.23
PTPRK-218ENST00000525459 FMC1Q96HJ9 113 aa13.63□□□□□ -0.23
PTPRK-218ENST00000525459 VAX2Q9UIW0 290 aa13.63□□□□□ -0.23
PTPRK-218ENST00000525459 KLLNB2CW77 178 aa13.62□□□□□ -0.23
PTPRK-218ENST00000525459 CRXO43186 299 aaPredicted RBP13.62□□□□□ -0.23
PTPRK-218ENST00000525459 PDE6DO43924 150 aa13.62□□□□□ -0.23
PTPRK-218ENST00000525459 S100A9P06702 114 aaKnown RBP13.62□□□□□ -0.23
PTPRK-218ENST00000525459 ZNF705AQ6ZN79 300 aaPredicted RBP13.62□□□□□ -0.23
PTPRK-218ENST00000525459 Q8TAT8 98 aa13.62□□□□□ -0.23
PTPRK-218ENST00000525459 GPX1P07203 203 aa13.61□□□□□ -0.23
PTPRK-218ENST00000525459 UBE2G1P62253 170 aa13.61□□□□□ -0.23
PTPRK-218ENST00000525459 NEU1Q99519 415 aa13.61□□□□□ -0.23
PTPRK-218ENST00000525459 RARRES2Q99969 163 aa13.61□□□□□ -0.23
PTPRK-218ENST00000525459 U3KQK5 164 aa13.61□□□□□ -0.23
PTPRK-218ENST00000525459 AKR1C3P42330 323 aa13.61□□□□□ -0.23
PTPRK-218ENST00000525459 RAB14P61106 215 aa13.61□□□□□ -0.23
PTPRK-218ENST00000525459 SAPCD1Q5SSQ6 148 aa13.61□□□□□ -0.23
PTPRK-218ENST00000525459 GFI1BQ5VTD9 330 aa13.61□□□□□ -0.23
PTPRK-218ENST00000525459 OR11H2Q8NH07 326 aa13.61□□□□□ -0.23
PTPRK-218ENST00000525459 TMEM208Q9BTX3 173 aa13.61□□□□□ -0.23
PTPRK-218ENST00000525459 RETNQ9HD89 108 aa13.61□□□□□ -0.23
PTPRK-218ENST00000525459 PSG8Q9UQ74 426 aa13.61□□□□□ -0.23
PTPRK-218ENST00000525459 KLF12Q9Y4X4 402 aa13.61□□□□□ -0.23
PTPRK-218ENST00000525459 TRAV12-2A0A075B6T6 113 aa13.6□□□□□ -0.23
PTPRK-218ENST00000525459 TRAV8-1A0A0A6YYK1 113 aa13.6□□□□□ -0.23
PTPRK-218ENST00000525459 TRBV6-1A0A0K0K1D8 114 aa13.6□□□□□ -0.23
PTPRK-218ENST00000525459 C7orf71A4D174 169 aa13.6□□□□□ -0.23
PTPRK-218ENST00000525459 SMIM9A6NGZ8 99 aa13.6□□□□□ -0.23
PTPRK-218ENST00000525459 NDUFS6O75380 124 aaKnown RBP13.6□□□□□ -0.23
PTPRK-218ENST00000525459 MIFP14174 115 aa13.6□□□□□ -0.23
PTPRK-218ENST00000525459 ZFAND2AQ8N6M9 145 aa13.6□□□□□ -0.23
PTPRK-218ENST00000525459 C11orf52Q96A22 123 aa13.6□□□□□ -0.23
PTPRK-218ENST00000525459 NIPSNAP3BQ9BS92 247 aa13.6□□□□□ -0.23
PTPRK-218ENST00000525459 LOC102723971A0A1B0GUV8 181 aa13.59□□□□□ -0.23
PTPRK-218ENST00000525459 IGLV2-11P01706 119 aa13.59□□□□□ -0.23
PTPRK-218ENST00000525459 TREM1Q9NP99 234 aa13.59□□□□□ -0.23
PTPRK-218ENST00000525459 RBFOX3A6NFN3 312 aa13.59□□□□□ -0.23
PTPRK-218ENST00000525459 H7BYZ3 331 aa13.59□□□□□ -0.23
PTPRK-218ENST00000525459 TMEM183BQ1AE95 376 aa13.59□□□□□ -0.23
PTPRK-218ENST00000525459 Q86TA4 180 aa13.59□□□□□ -0.23
PTPRK-218ENST00000525459 C2CD4CQ8TF44 421 aa13.59□□□□□ -0.23
PTPRK-218ENST00000525459 ZFP30Q9Y2G7 519 aa13.59□□□□□ -0.23
PTPRK-218ENST00000525459 SCO2A0A1W2PP80 73 aa13.58□□□□□ -0.24
PTPRK-218ENST00000525459 PRNTQ86SH4 94 aa13.58□□□□□ -0.24
PTPRK-218ENST00000525459 C1orf158Q8N1D5 194 aa13.58□□□□□ -0.24
PTPRK-218ENST00000525459 FAM210AQ96ND0 272 aa13.58□□□□□ -0.24
PTPRK-218ENST00000525459 COL7A1Q02388 2944 aa13.57□□□□□ -0.24
PTPRK-218ENST00000525459 ZNF506Q5JVG8 444 aa13.57□□□□□ -0.24
PTPRK-218ENST00000525459 X6R8D5 127 aa13.57□□□□□ -0.24
PTPRK-218ENST00000525459 J3KRW8 73 aa13.56□□□□□ -0.24
PTPRK-218ENST00000525459 Q6AWC8 147 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms