RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 TMPRSS5Q9H3S3 457 aa8□□□□□ -1.13
TRAPPC4-204ENST00000524797 UBE2L5PA0A1B0GUS4 154 aa7.99□□□□□ -1.13
TRAPPC4-204ENST00000524797 RAB2AP61019 212 aa7.99□□□□□ -1.13
TRAPPC4-204ENST00000524797 PRR20EP86478 221 aa7.99□□□□□ -1.13
TRAPPC4-204ENST00000524797 PRR20CP86479 221 aa7.99□□□□□ -1.13
TRAPPC4-204ENST00000524797 PRR20DP86480 221 aa7.99□□□□□ -1.13
TRAPPC4-204ENST00000524797 PRR20BP86481 221 aa7.99□□□□□ -1.13
TRAPPC4-204ENST00000524797 PRR20AP86496 221 aa7.99□□□□□ -1.13
TRAPPC4-204ENST00000524797 MORN5Q5VZ52 161 aa7.99□□□□□ -1.13
TRAPPC4-204ENST00000524797 C10orf113Q5VZT2 155 aa7.99□□□□□ -1.13
TRAPPC4-204ENST00000524797 MIC13Q5XKP0 118 aa7.99□□□□□ -1.13
TRAPPC4-204ENST00000524797 RPP25LQ8N5L8 163 aaKnown RBP7.99□□□□□ -1.13
TRAPPC4-204ENST00000524797 VPS13DQ5THJ4 4388 aa7.99□□□□□ -1.13
TRAPPC4-204ENST00000524797 IGHV4-4A0A075B6R2 117 aa7.99□□□□□ -1.13
TRAPPC4-204ENST00000524797 DEFB131BA0A096LNP1 70 aa7.99□□□□□ -1.13
TRAPPC4-204ENST00000524797 HBE1P02100 147 aa7.99□□□□□ -1.13
TRAPPC4-204ENST00000524797 SFTA3P0C7M3 94 aa7.99□□□□□ -1.13
TRAPPC4-204ENST00000524797 SPART-AS1P0CW21 52 aa7.99□□□□□ -1.13
TRAPPC4-204ENST00000524797 RAB5CP51148 216 aa7.99□□□□□ -1.13
TRAPPC4-204ENST00000524797 EMP1P54849 157 aa7.99□□□□□ -1.13
TRAPPC4-204ENST00000524797 EIF5AP63241 154 aaKnown RBP7.99□□□□□ -1.13
TRAPPC4-204ENST00000524797 SPINK13Q1W4C9 94 aa7.99□□□□□ -1.13
TRAPPC4-204ENST00000524797 EIF5AL1Q6IS14 154 aaKnown RBP7.99□□□□□ -1.13
TRAPPC4-204ENST00000524797 LCN15Q6UWW0 184 aa7.99□□□□□ -1.13
TRAPPC4-204ENST00000524797 OR8A1Q8NGG7 326 aa7.99□□□□□ -1.13
TRAPPC4-204ENST00000524797 HIST1H2BAQ96A08 127 aa7.99□□□□□ -1.13
TRAPPC4-204ENST00000524797 SLC50A1Q9BRV3 221 aa7.99□□□□□ -1.13
TRAPPC4-204ENST00000524797 RNF126Q9BV68 326 aa7.99□□□□□ -1.13
TRAPPC4-204ENST00000524797 DNAJC4Q9NNZ3 241 aa7.99□□□□□ -1.13
TRAPPC4-204ENST00000524797 LOC102723971A0A1B0GUV8 181 aa7.98□□□□□ -1.13
TRAPPC4-204ENST00000524797 M0R2Z0 102 aa7.98□□□□□ -1.13
TRAPPC4-204ENST00000524797 CRXO43186 299 aaPredicted RBP7.98□□□□□ -1.13
TRAPPC4-204ENST00000524797 INSP01308 110 aa7.98□□□□□ -1.13
TRAPPC4-204ENST00000524797 HBG1P69891 147 aa7.98□□□□□ -1.13
TRAPPC4-204ENST00000524797 HBG2P69892 147 aa7.98□□□□□ -1.13
TRAPPC4-204ENST00000524797 CYCSP99999 105 aaKnown RBP7.98□□□□□ -1.13
TRAPPC4-204ENST00000524797 HIST1H1AQ02539 215 aaPredicted RBP7.98□□□□□ -1.13
TRAPPC4-204ENST00000524797 BAXQ07812 192 aa7.98□□□□□ -1.13
TRAPPC4-204ENST00000524797 ATP6V1FQ16864 119 aa7.98□□□□□ -1.13
TRAPPC4-204ENST00000524797 BPIFA4PQ86YQ2 179 aa7.98□□□□□ -1.13
TRAPPC4-204ENST00000524797 OR1L4Q8NGR5 311 aa7.98□□□□□ -1.13
TRAPPC4-204ENST00000524797 TMED6Q8WW62 240 aa7.98□□□□□ -1.13
TRAPPC4-204ENST00000524797 TRAV5A0A0B4J249 113 aa7.97□□□□□ -1.13
TRAPPC4-204ENST00000524797 SNRPCP09234 159 aaKnown RBP7.97□□□□□ -1.13
TRAPPC4-204ENST00000524797 PRB4P10163 310 aaPredicted RBP7.97□□□□□ -1.13
TRAPPC4-204ENST00000524797 FGF7P21781 194 aa7.97□□□□□ -1.13
TRAPPC4-204ENST00000524797 G0S2P27469 103 aa7.97□□□□□ -1.13
TRAPPC4-204ENST00000524797 RPL29P47914 159 aaKnown RBP7.97□□□□□ -1.13
TRAPPC4-204ENST00000524797 RRN3P1Q2M238 152 aa7.97□□□□□ -1.13
TRAPPC4-204ENST00000524797 FAM222AQ5U5X8 452 aa7.97□□□□□ -1.13
TRAPPC4-204ENST00000524797 Q6ZRG5 221 aa7.97□□□□□ -1.13
TRAPPC4-204ENST00000524797 RPUSD4Q96CM3 377 aaKnown RBP7.97□□□□□ -1.13
TRAPPC4-204ENST00000524797 TMEM208Q9BTX3 173 aa7.97□□□□□ -1.13
TRAPPC4-204ENST00000524797 NMES1Q9C002 83 aa7.97□□□□□ -1.13
TRAPPC4-204ENST00000524797 ZNF331Q9NQX6 463 aaPredicted RBP7.97□□□□□ -1.13
TRAPPC4-204ENST00000524797 SLC39A9Q9NUM3 307 aa7.97□□□□□ -1.13
TRAPPC4-204ENST00000524797 DKK2Q9UBU2 259 aa7.97□□□□□ -1.13
TRAPPC4-204ENST00000524797 EPPK1P58107 5090 aaKnown RBP7.97□□□□□ -1.13
TRAPPC4-204ENST00000524797 BIRC6Q9NR09 4857 aa7.97□□□□□ -1.13
TRAPPC4-204ENST00000524797 TEX48A0A1B0GUV7 120 aa7.97□□□□□ -1.13
TRAPPC4-204ENST00000524797 H3BTX0 84 aa7.97□□□□□ -1.13
TRAPPC4-204ENST00000524797 SLC17A3O00476 420 aa7.97□□□□□ -1.13
TRAPPC4-204ENST00000524797 IGLC2P0DOY2 106 aa7.97□□□□□ -1.13
TRAPPC4-204ENST00000524797 RHOBP62745 196 aa7.97□□□□□ -1.13
TRAPPC4-204ENST00000524797 RPS10P5Q9NQ39 176 aa7.97□□□□□ -1.13
TRAPPC4-204ENST00000524797 PXMP4Q9Y6I8 212 aa7.97□□□□□ -1.13
TRAPPC4-204ENST00000524797 H3BQ15 152 aa7.96□□□□□ -1.13
TRAPPC4-204ENST00000524797 C14orf144Q96I85 54 aa7.96□□□□□ -1.13
TRAPPC4-204ENST00000524797 NIPSNAP3BQ9BS92 247 aa7.96□□□□□ -1.13
TRAPPC4-204ENST00000524797 CYTL1Q9NRR1 136 aa7.96□□□□□ -1.13
TRAPPC4-204ENST00000524797 OR5AC2Q9NZP5 309 aa7.96□□□□□ -1.13
TRAPPC4-204ENST00000524797 YTHDF2Q9Y5A9 579 aaKnown RBP7.96□□□□□ -1.13
TRAPPC4-204ENST00000524797 TRAV12-2A0A075B6T6 113 aa7.95□□□□□ -1.14
TRAPPC4-204ENST00000524797 ZNF705GA8MUZ8 300 aaPredicted RBP7.95□□□□□ -1.14
TRAPPC4-204ENST00000524797 E5RGE8 158 aa7.95□□□□□ -1.14
TRAPPC4-204ENST00000524797 H0YIZ8 118 aa7.95□□□□□ -1.14
TRAPPC4-204ENST00000524797 RAB5AP20339 215 aa7.95□□□□□ -1.14
TRAPPC4-204ENST00000524797 NHLH2Q02577 135 aa7.95□□□□□ -1.14
TRAPPC4-204ENST00000524797 SLC25A31Q9H0C2 315 aa7.95□□□□□ -1.14
TRAPPC4-204ENST00000524797 PLA2G2EQ9NZK7 142 aa7.95□□□□□ -1.14
TRAPPC4-204ENST00000524797 PRAC2D3DTV9 90 aa7.95□□□□□ -1.14
TRAPPC4-204ENST00000524797 MPDU1O75352 247 aa7.95□□□□□ -1.14
TRAPPC4-204ENST00000524797 PRM2P04554 102 aa7.95□□□□□ -1.14
TRAPPC4-204ENST00000524797 GUK1Q16774 197 aa7.95□□□□□ -1.14
TRAPPC4-204ENST00000524797 DNAH10Q8IVF4 4471 aa7.95□□□□□ -1.14
TRAPPC4-204ENST00000524797 TAAR5O14804 337 aa7.94□□□□□ -1.14
TRAPPC4-204ENST00000524797 LINC00614P0C842 121 aa7.94□□□□□ -1.14
TRAPPC4-204ENST00000524797 DNLZQ5SXM8 178 aa7.94□□□□□ -1.14
TRAPPC4-204ENST00000524797 OR5C1Q8NGR4 320 aa7.94□□□□□ -1.14
TRAPPC4-204ENST00000524797 NPCDR1Q9BY65 106 aa7.94□□□□□ -1.14
TRAPPC4-204ENST00000524797 ZNF586Q9NXT0 402 aa7.94□□□□□ -1.14
TRAPPC4-204ENST00000524797 KMT2AQ03164 3969 aa7.93□□□□□ -1.14
TRAPPC4-204ENST00000524797 PET100P0DJ07 73 aa7.93□□□□□ -1.14
TRAPPC4-204ENST00000524797 S100A2P29034 98 aa7.93□□□□□ -1.14
TRAPPC4-204ENST00000524797 TMEM256Q8N2U0 113 aa7.93□□□□□ -1.14
TRAPPC4-204ENST00000524797 OR10J6PQ8NGY7 276 aa7.93□□□□□ -1.14
TRAPPC4-204ENST00000524797 NDUFAF3Q9BU61 184 aa7.93□□□□□ -1.14
TRAPPC4-204ENST00000524797 TMEM14CQ9P0S9 112 aa7.93□□□□□ -1.14
TRAPPC4-204ENST00000524797 C7orf77A4D0Y5 90 aa7.93□□□□□ -1.14
TRAPPC4-204ENST00000524797 ZNF253O75346 499 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms