RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 C7orf77A4D0Y5 90 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 OR6C6A6NF89 314 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 C1orf196B1AJZ1 125 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 UMAD1C9J7I0 102 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 M0R135 149 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 SDCBPO00560 298 aaPredicted RBP1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 RER1O15258 196 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 CDS2O95674 445 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 IGKV1-17P01599 117 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 FABP1P07148 127 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 IGHV3-30-3P0DP02 117 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 CD99P14209 185 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 LGALS3P17931 250 aaKnown RBP1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 BLVRBP30043 206 aaPredicted RBP1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 RPL12P30050 165 aaKnown RBP1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 PPP1CCP36873 323 aaKnown RBP1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 SULT1A1P50225 295 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 RAB5CP51148 216 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 RBM11P57052 281 aaKnown RBP1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 PIGPP57054 158 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 TMEM33P57088 247 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 DAD1P61803 113 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 LSM6P62312 80 aaKnown RBP1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 H3F3AP84243 136 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 DEFA6Q01524 100 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 SMCO1Q147U7 214 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 KISS1Q15726 138 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 GUK1Q16774 197 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 IAH1Q2TAA2 248 aaPredicted RBP1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 DEFB133Q30KQ1 61 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 NMSQ5H8A3 153 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 HEPN1Q6WQI6 88 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 SDIM1Q6ZPB5 146 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 Q6ZS49 121 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 C6orf201Q7Z4U5 140 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 ZNF283Q8N7M2 679 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 LMX1AQ8TE12 382 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 PP6455Q8WZ26 134 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 MAFIPQ8WZ33 124 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 MUCL1Q96DR8 90 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 PACRGQ96M98 296 aaPredicted RBP1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 SMIM3Q9BZL3 60 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 SH3BGRL3Q9H299 93 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 SMDT1Q9H4I9 107 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 SLC2A9Q9NRM0 540 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 SPANXB1Q9NS25 103 aaPredicted RBP1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 C19orf12Q9NSK7 152 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 LYRM2Q9NU23 88 aaPredicted RBP1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 AK3Q9UIJ7 227 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 LSM5Q9Y4Y9 91 aaKnown RBP1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 CHCHD2Q9Y6H1 151 aaPredicted RBP1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 U3KQA8 63 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 CADP27708 2225 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 PLXNB1O43157 2135 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 NCOR1O75376 2440 aa1.64□□□□□ -2.15
HMGN1P28-201ENST00000521340 IGLV10-54A0A075B6I4 117 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 IGKV1D-17A0A075B6S4 117 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 BORCS7-ASMTA0A0B4J1R7 106 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 TRAV1-1A0A0B4J248 108 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 C17orf98A8MV24 154 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 B4DEV8 164 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 H0Y980 276 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 NAPSAO96009 420 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 IFNA21P01568 189 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 HBZP02008 142 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 SRP19P09132 144 aaKnown RBP1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 LINC00614P0C842 121 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 ZNF728P0DKX0 622 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 COX6A1P12074 109 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 CBR1P16152 277 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 ORM2P19652 201 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 S100PP25815 95 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 FKBP2P26885 142 aaKnown RBP1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 ATP6V0CP27449 155 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 AKR1C3P42330 323 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 POLR2GP62487 172 aaKnown RBP eCLIP1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 HERVK_113P63121 156 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 FABP9Q0Z7S8 132 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 PIGYQ3MUY2 71 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 FAM229BQ4G0N7 80 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 PYY3Q5JQD4 70 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 FAM27BQ5VT28 67 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 DPPA3Q6W0C5 159 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 LY6G5BQ8NDX9 201 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 TSTD1Q8NFU3 115 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 OR51T1Q8NGJ9 327 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 OR13D1Q8NGV5 346 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 Q8WTZ3 238 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 OR5P3Q8WZ94 311 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 RNASE6Q93091 150 aaKnown RBP1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 IGF2BP2-AS1Q96M15 143 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 TP53RKQ96S44 253 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 GPER1Q99527 375 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 PBDC1Q9BVG4 233 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 TMEM222Q9H0R3 208 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 SLC35B3Q9H1N7 401 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 PROK2Q9HC23 129 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 GSKIPQ9P0R6 139 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 ZNF391Q9UJN7 358 aa1.63□□□□□ -2.15
HMGN1P28-201ENST00000521340 TMEM56-RWDD3S4R434 201 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms