RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 SIVA1O15304 175 aa10.09□□□□□ -0.79
TRAPPC9-208ENST00000520857 SPANXN1Q5VSR9 72 aa10.09□□□□□ -0.79
TRAPPC9-208ENST00000520857 LYPD1Q8N2G4 141 aa10.09□□□□□ -0.79
TRAPPC9-208ENST00000520857 DPF1Q92782 380 aa10.09□□□□□ -0.79
TRAPPC9-208ENST00000520857 PRR25Q96S07 402 aa10.09□□□□□ -0.79
TRAPPC9-208ENST00000520857 COL6A6A6NMZ7 2263 aa10.08□□□□□ -0.8
TRAPPC9-208ENST00000520857 LOC107984156A0A0G2JMH3 177 aa10.08□□□□□ -0.8
TRAPPC9-208ENST00000520857 ERCC8Q13216 396 aa10.08□□□□□ -0.8
TRAPPC9-208ENST00000520857 ARL17AQ8IVW1 177 aa10.08□□□□□ -0.8
TRAPPC9-208ENST00000520857 FTH1P19P0C7X4 201 aa10.08□□□□□ -0.8
TRAPPC9-208ENST00000520857 SCGB1D4Q6XE38 83 aa10.08□□□□□ -0.8
TRAPPC9-208ENST00000520857 NXT2Q9NPJ8 142 aaKnown RBP10.08□□□□□ -0.8
TRAPPC9-208ENST00000520857 C21orf62Q9NYP8 219 aa10.08□□□□□ -0.8
TRAPPC9-208ENST00000520857 ZFHX2Q9C0A1 2572 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC9-208ENST00000520857 K7EIM0 57 aa10.08□□□□□ -0.8
TRAPPC9-208ENST00000520857 FABP5P3A8MUU1 101 aa10.07□□□□□ -0.8
TRAPPC9-208ENST00000520857 FCN3O75636 299 aa10.07□□□□□ -0.8
TRAPPC9-208ENST00000520857 GAS8-AS1O95177 125 aa10.07□□□□□ -0.8
TRAPPC9-208ENST00000520857 SMIM17P0DL12 118 aa10.07□□□□□ -0.8
TRAPPC9-208ENST00000520857 GFRALQ6UXV0 394 aa10.07□□□□□ -0.8
TRAPPC9-208ENST00000520857 DEFB123Q8N688 67 aa10.07□□□□□ -0.8
TRAPPC9-208ENST00000520857 ABHD17AQ96GS6 310 aa10.07□□□□□ -0.8
TRAPPC9-208ENST00000520857 RAB1BQ9H0U4 201 aa10.07□□□□□ -0.8
TRAPPC9-208ENST00000520857 MRPL35Q9NZE8 188 aaKnown RBP10.07□□□□□ -0.8
TRAPPC9-208ENST00000520857 A0A1B0GV72 72 aa10.07□□□□□ -0.8
TRAPPC9-208ENST00000520857 K7EM74 188 aa10.07□□□□□ -0.8
TRAPPC9-208ENST00000520857 PIP4P2Q8N4L2 257 aa10.07□□□□□ -0.8
TRAPPC9-208ENST00000520857 TLN1Q9Y490 2541 aaKnown RBP10.07□□□□□ -0.8
TRAPPC9-208ENST00000520857 TRAV26-2A0A0B4J265 109 aa10.06□□□□□ -0.8
TRAPPC9-208ENST00000520857 NEGR1Q7Z3B1 354 aa10.06□□□□□ -0.8
TRAPPC9-208ENST00000520857 WFDC12Q8WWY7 111 aa10.06□□□□□ -0.8
TRAPPC9-208ENST00000520857 SRSF9Q13242 221 aaKnown RBP eCLIP10.06□□□□□ -0.8
TRAPPC9-208ENST00000520857 OTOGLQ3ZCN5 2332 aa10.06□□□□□ -0.8
TRAPPC9-208ENST00000520857 GAGE12HA6NDE8 117 aa10.06□□□□□ -0.8
TRAPPC9-208ENST00000520857 ZNF493Q6ZR52 646 aa10.06□□□□□ -0.8
TRAPPC9-208ENST00000520857 OR11H12B2RN74 326 aa10.05□□□□□ -0.8
TRAPPC9-208ENST00000520857 NBR2O15453 112 aa10.05□□□□□ -0.8
TRAPPC9-208ENST00000520857 ZNF80P51504 273 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC9-208ENST00000520857 GAGE13Q4V321 117 aa10.05□□□□□ -0.8
TRAPPC9-208ENST00000520857 OR11H1Q8NG94 326 aa10.05□□□□□ -0.8
TRAPPC9-208ENST00000520857 OR11H2Q8NH07 326 aa10.05□□□□□ -0.8
TRAPPC9-208ENST00000520857 CYSLTR1Q9Y271 337 aa10.05□□□□□ -0.8
TRAPPC9-208ENST00000520857 ATP5LO75964 103 aa10.05□□□□□ -0.8
TRAPPC9-208ENST00000520857 ODF1Q14990 250 aa10.05□□□□□ -0.8
TRAPPC9-208ENST00000520857 NUP37Q8NFH4 326 aa10.05□□□□□ -0.8
TRAPPC9-208ENST00000520857 DEFB104AQ8WTQ1 72 aa10.05□□□□□ -0.8
TRAPPC9-208ENST00000520857 COLQQ9Y215 455 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC9-208ENST00000520857 EFNA4P52798 201 aa10.05□□□□□ -0.8
TRAPPC9-208ENST00000520857 RNF182Q8N6D2 247 aa10.05□□□□□ -0.8
TRAPPC9-208ENST00000520857 DMXL2Q8TDJ6 3036 aa10.04□□□□□ -0.8
TRAPPC9-208ENST00000520857 S100A4P26447 101 aaKnown RBP10.04□□□□□ -0.8
TRAPPC9-208ENST00000520857 KLRD1Q13241 179 aa10.04□□□□□ -0.8
TRAPPC9-208ENST00000520857 ECSCRQ19T08 205 aa10.04□□□□□ -0.8
TRAPPC9-208ENST00000520857 CEND1Q8N111 149 aa10.04□□□□□ -0.8
TRAPPC9-208ENST00000520857 ZNF418Q8TF45 676 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC9-208ENST00000520857 TGFAP01135 160 aa10.04□□□□□ -0.8
TRAPPC9-208ENST00000520857 MRGPRG-AS1Q2M3A8 158 aa10.04□□□□□ -0.8
TRAPPC9-208ENST00000520857 ZNF502Q8TBZ5 544 aa10.04□□□□□ -0.8
TRAPPC9-208ENST00000520857 MRPL16Q9NX20 251 aaKnown RBP10.04□□□□□ -0.8
TRAPPC9-208ENST00000520857 CD300EQ496F6 205 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC9-208ENST00000520857 LY6HO94772 140 aa10.03□□□□□ -0.8
TRAPPC9-208ENST00000520857 ADGRG4Q8IZF6 3080 aa10.03□□□□□ -0.8
TRAPPC9-208ENST00000520857 PDE6HQ13956 83 aa10.03□□□□□ -0.8
TRAPPC9-208ENST00000520857 DTX2Q86UW9 622 aa10.03□□□□□ -0.8
TRAPPC9-208ENST00000520857 DPM3Q9P2X0 92 aa10.03□□□□□ -0.8
TRAPPC9-208ENST00000520857 IGLL5B9A064 214 aa10.03□□□□□ -0.8
TRAPPC9-208ENST00000520857 CEACAM3P40198 252 aa10.03□□□□□ -0.8
TRAPPC9-208ENST00000520857 ZNF562Q6V9R5 426 aa10.03□□□□□ -0.8
TRAPPC9-208ENST00000520857 A0A0G2JNJ9 132 aa10.02□□□□□ -0.8
TRAPPC9-208ENST00000520857 TNRC18O15417 2968 aaPredicted RBP10.02□□□□□ -0.8
TRAPPC9-208ENST00000520857 APOMO95445 188 aa10.02□□□□□ -0.8
TRAPPC9-208ENST00000520857 MGPP08493 103 aa10.02□□□□□ -0.8
TRAPPC9-208ENST00000520857 TMEM78Q5T7P6 136 aa10.02□□□□□ -0.8
TRAPPC9-208ENST00000520857 TNFRSF14Q92956 283 aa10.02□□□□□ -0.8
TRAPPC9-208ENST00000520857 Q9UFV3 132 aa10.02□□□□□ -0.8
TRAPPC9-208ENST00000520857 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.02□□□□□ -0.815e-6■■■■□ 22.8
TRAPPC9-208ENST00000520857 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC9-208ENST00000520857 H3BVH4 76 aa10.02□□□□□ -0.81
TRAPPC9-208ENST00000520857 M0R381 172 aa10.02□□□□□ -0.81
TRAPPC9-208ENST00000520857 C12orf74Q32Q52 190 aa10.02□□□□□ -0.81
TRAPPC9-208ENST00000520857 VKORC1Q9BQB6 163 aa10.02□□□□□ -0.81
TRAPPC9-208ENST00000520857 SPRY2O43597 315 aa10.02□□□□□ -0.81
TRAPPC9-208ENST00000520857 ATP5G2Q06055 141 aa10.02□□□□□ -0.81
TRAPPC9-208ENST00000520857 IL17RELQ6ZVW7 336 aa10.02□□□□□ -0.81
TRAPPC9-208ENST00000520857 FAM57AQ8TBR7 257 aa10.02□□□□□ -0.81
TRAPPC9-208ENST00000520857 ANKRD11Q6UB99 2663 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC9-208ENST00000520857 TACC2O95359 2948 aa10.02□□□□□ -0.81
TRAPPC9-208ENST00000520857 IGLV1-47P01700 117 aa10.01□□□□□ -0.81
TRAPPC9-208ENST00000520857 RPL11P62913 178 aaKnown RBP10.01□□□□□ -0.81
TRAPPC9-208ENST00000520857 LAGE3Q14657 143 aa10.01□□□□□ -0.81
TRAPPC9-208ENST00000520857 C16orf54Q6UWD8 224 aa10.01□□□□□ -0.81
TRAPPC9-208ENST00000520857 SCGB3A1Q96QR1 104 aa10.01□□□□□ -0.81
TRAPPC9-208ENST00000520857 IGKV3-7A0A075B6H7 116 aa10.01□□□□□ -0.81
TRAPPC9-208ENST00000520857 TRBV6-1A0A0K0K1D8 114 aa10.01□□□□□ -0.81
TRAPPC9-208ENST00000520857 CD3EP07766 207 aa10.01□□□□□ -0.81
TRAPPC9-208ENST00000520857 DLX6P56179 175 aa10.01□□□□□ -0.81
TRAPPC9-208ENST00000520857 CKS1BP61024 79 aa10.01□□□□□ -0.81
TRAPPC9-208ENST00000520857 IGFL2Q6UWQ7 119 aa10.01□□□□□ -0.81
TRAPPC9-208ENST00000520857 DYNAPQ8N1N2 210 aa10.01□□□□□ -0.81
TRAPPC9-208ENST00000520857 C8orf31Q8N9H6 132 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms