RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 ZNF138P52744 262 aa6.67□□□□□ -1.34
CSMD1-208ENST00000520561 PNRC1Q12796 327 aaPredicted RBP6.67□□□□□ -1.34
CSMD1-208ENST00000520561 ERCC8Q13216 396 aa6.67□□□□□ -1.34
CSMD1-208ENST00000520561 ADIRFQ15847 76 aa6.67□□□□□ -1.34
CSMD1-208ENST00000520561 TMEM241Q24JQ0 296 aa6.67□□□□□ -1.34
CSMD1-208ENST00000520561 KRTAP21-3Q3LHN1 58 aa6.67□□□□□ -1.34
CSMD1-208ENST00000520561 ACTL10Q5JWF8 245 aa6.67□□□□□ -1.34
CSMD1-208ENST00000520561 SAPCD1Q5SSQ6 148 aa6.67□□□□□ -1.34
CSMD1-208ENST00000520561 C9orf47Q6ZRZ4 202 aa6.67□□□□□ -1.34
CSMD1-208ENST00000520561 BAGE2Q86Y30 109 aa6.67□□□□□ -1.34
CSMD1-208ENST00000520561 Q8TAT8 98 aa6.67□□□□□ -1.34
CSMD1-208ENST00000520561 SGK494Q96LW2 274 aa6.67□□□□□ -1.34
CSMD1-208ENST00000520561 IGF2BP2-AS1Q96M15 143 aa6.67□□□□□ -1.34
CSMD1-208ENST00000520561 LINC00477Q96M19 166 aa6.67□□□□□ -1.34
CSMD1-208ENST00000520561 VGLL1Q99990 258 aa6.67□□□□□ -1.34
CSMD1-208ENST00000520561 FAM110AQ9BQ89 295 aa6.67□□□□□ -1.34
CSMD1-208ENST00000520561 BIN3Q9NQY0 253 aa6.67□□□□□ -1.34
CSMD1-208ENST00000520561 PPP1R14DQ9NXH3 145 aa6.67□□□□□ -1.34
CSMD1-208ENST00000520561 ZFP30Q9Y2G7 519 aa6.67□□□□□ -1.34
CSMD1-208ENST00000520561 LY96Q9Y6Y9 160 aa6.67□□□□□ -1.34
CSMD1-208ENST00000520561 HLA-DRB4X5D2U9 266 aa6.67□□□□□ -1.34
CSMD1-208ENST00000520561 TRBV20OR9-2A0A075B6H5 130 aa6.66□□□□□ -1.34
CSMD1-208ENST00000520561 A0A0J9YX75 114 aa6.66□□□□□ -1.34
CSMD1-208ENST00000520561 KNCNA6PVL3 124 aa6.66□□□□□ -1.34
CSMD1-208ENST00000520561 M0R036 132 aa6.66□□□□□ -1.34
CSMD1-208ENST00000520561 IGLV2-11P01706 119 aa6.66□□□□□ -1.34
CSMD1-208ENST00000520561 APOC3P02656 99 aa6.66□□□□□ -1.34
CSMD1-208ENST00000520561 CD7P09564 240 aa6.66□□□□□ -1.34
CSMD1-208ENST00000520561 ZNF705DP0CH99 300 aaPredicted RBP6.66□□□□□ -1.34
CSMD1-208ENST00000520561 ZNF705BP0CI00 300 aaPredicted RBP6.66□□□□□ -1.34
CSMD1-208ENST00000520561 CT45A10P0DMU9 189 aa6.66□□□□□ -1.34
CSMD1-208ENST00000520561 MGST1P10620 155 aaKnown RBP6.66□□□□□ -1.34
CSMD1-208ENST00000520561 DEFB1P60022 68 aa6.66□□□□□ -1.34
CSMD1-208ENST00000520561 C10orf91Q5T1B1 145 aa6.66□□□□□ -1.34
CSMD1-208ENST00000520561 STHQ8IWL8 128 aa6.66□□□□□ -1.34
CSMD1-208ENST00000520561 SVBPQ8N300 66 aa6.66□□□□□ -1.34
CSMD1-208ENST00000520561 OR4B1Q8NGF8 309 aa6.66□□□□□ -1.34
CSMD1-208ENST00000520561 TVP23CQ96ET8 276 aa6.66□□□□□ -1.34
CSMD1-208ENST00000520561 AGPAT4-IT1Q9H0P7 198 aa6.66□□□□□ -1.34
CSMD1-208ENST00000520561 ZNF492Q9P255 531 aa6.66□□□□□ -1.34
CSMD1-208ENST00000520561 LENEPQ9Y5L5 61 aa6.66□□□□□ -1.34
CSMD1-208ENST00000520561 TRBV7-9A0A0J9YWB2 115 aa6.65□□□□□ -1.34
CSMD1-208ENST00000520561 PGPEP1LA6NFU8 196 aa6.65□□□□□ -1.34
CSMD1-208ENST00000520561 LEPP41159 167 aa6.65□□□□□ -1.34
CSMD1-208ENST00000520561 RPL23P62829 140 aaKnown RBP6.65□□□□□ -1.34
CSMD1-208ENST00000520561 SMUG1Q53HV7 270 aa6.65□□□□□ -1.34
CSMD1-208ENST00000520561 OXLD1Q5BKU9 147 aa6.65□□□□□ -1.34
CSMD1-208ENST00000520561 GDF5OSQ5U4N7 250 aa6.65□□□□□ -1.34
CSMD1-208ENST00000520561 LINC01551Q86U37 167 aa6.65□□□□□ -1.34
CSMD1-208ENST00000520561 APRG1Q8IVJ8 170 aa6.65□□□□□ -1.34
CSMD1-208ENST00000520561 TMEM183AQ8IXX5 376 aa6.65□□□□□ -1.34
CSMD1-208ENST00000520561 NHLRC2Q8NBF2 726 aa6.65□□□□□ -1.34
CSMD1-208ENST00000520561 ODF3Q96PU9 254 aa6.65□□□□□ -1.34
CSMD1-208ENST00000520561 PRR25Q96S07 402 aa6.65□□□□□ -1.34
CSMD1-208ENST00000520561 SDF2L1Q9HCN8 221 aa6.65□□□□□ -1.34
CSMD1-208ENST00000520561 H3BMM0 161 aa6.64□□□□□ -1.35
CSMD1-208ENST00000520561 SNAPINO95295 136 aa6.64□□□□□ -1.35
CSMD1-208ENST00000520561 IGKV3-20P01619 116 aa6.64□□□□□ -1.35
CSMD1-208ENST00000520561 TSPOP30536 169 aa6.64□□□□□ -1.35
CSMD1-208ENST00000520561 ZNF124Q15973 351 aa6.64□□□□□ -1.35
CSMD1-208ENST00000520561 PRR27Q6MZM9 219 aa6.64□□□□□ -1.35
CSMD1-208ENST00000520561 ASCL2Q99929 193 aa6.64□□□□□ -1.35
CSMD1-208ENST00000520561 TENM1Q9UKZ4 2725 aa6.63□□□□□ -1.35
CSMD1-208ENST00000520561 COL6A5A8TX70 2615 aa6.63□□□□□ -1.35
CSMD1-208ENST00000520561 B4DEV8 164 aa6.63□□□□□ -1.35
CSMD1-208ENST00000520561 GCGP01275 180 aa6.63□□□□□ -1.35
CSMD1-208ENST00000520561 IGLV2-8P01709 118 aa6.63□□□□□ -1.35
CSMD1-208ENST00000520561 CRISP2P16562 243 aa6.63□□□□□ -1.35
CSMD1-208ENST00000520561 FBN1P35555 2871 aaKnown RBP6.63□□□□□ -1.35
CSMD1-208ENST00000520561 RHEBQ15382 184 aa6.63□□□□□ -1.35
CSMD1-208ENST00000520561 CLRN3Q8NCR9 226 aa6.63□□□□□ -1.35
CSMD1-208ENST00000520561 OCC1Q8TAD7 63 aa6.63□□□□□ -1.35
CSMD1-208ENST00000520561 ISOC2Q96AB3 205 aa6.63□□□□□ -1.35
CSMD1-208ENST00000520561 C8orf49Q96NF6 230 aa6.63□□□□□ -1.35
CSMD1-208ENST00000520561 CLUHP3Q96NS8 147 aa6.63□□□□□ -1.35
CSMD1-208ENST00000520561 MLST8Q9BVC4 326 aa6.63□□□□□ -1.35
CSMD1-208ENST00000520561 WFDC10AQ9H1F0 79 aa6.63□□□□□ -1.35
CSMD1-208ENST00000520561 C19orf73Q9NVV2 129 aa6.63□□□□□ -1.35
CSMD1-208ENST00000520561 AURKAIP1Q9NWT8 199 aaPredicted RBP6.63□□□□□ -1.35
CSMD1-208ENST00000520561 STAB1Q9NY15 2570 aa6.62□□□□□ -1.35
CSMD1-208ENST00000520561 A8MTW9 85 aa6.62□□□□□ -1.35
CSMD1-208ENST00000520561 G3V4G9 280 aa6.62□□□□□ -1.35
CSMD1-208ENST00000520561 J3KRW8 73 aa6.62□□□□□ -1.35
CSMD1-208ENST00000520561 K7EN84 100 aa6.62□□□□□ -1.35
CSMD1-208ENST00000520561 AMBPP02760 352 aa6.62□□□□□ -1.35
CSMD1-208ENST00000520561 GPX1P07203 203 aa6.62□□□□□ -1.35
CSMD1-208ENST00000520561 CDKN1BP46527 198 aa6.62□□□□□ -1.35
CSMD1-208ENST00000520561 NUTF2P61970 127 aaKnown RBP6.62□□□□□ -1.35
CSMD1-208ENST00000520561 EGFEM1PQ0D2K5 195 aa6.62□□□□□ -1.35
CSMD1-208ENST00000520561 OR5I1Q13606 314 aa6.62□□□□□ -1.35
CSMD1-208ENST00000520561 FAM162BQ5T6X4 162 aa6.62□□□□□ -1.35
CSMD1-208ENST00000520561 SAMD5Q5TGI4 173 aa6.62□□□□□ -1.35
CSMD1-208ENST00000520561 COX8CQ7Z4L0 72 aa6.62□□□□□ -1.35
CSMD1-208ENST00000520561 TRPT1Q86TN4 253 aaKnown RBP6.62□□□□□ -1.35
CSMD1-208ENST00000520561 DEFB125Q8N687 156 aa6.62□□□□□ -1.35
CSMD1-208ENST00000520561 ZFAND2AQ8N6M9 145 aa6.62□□□□□ -1.35
CSMD1-208ENST00000520561 C15orf54Q8N8G6 183 aa6.62□□□□□ -1.35
CSMD1-208ENST00000520561 DAZAP1Q96EP5 407 aaKnown RBP6.62□□□□□ -1.35
CSMD1-208ENST00000520561 ZC2HC1AQ96GY0 325 aa6.62□□□□□ -1.35
CSMD1-208ENST00000520561 FAM19A4Q96LR4 140 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms