RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 CTSZQ9UBR2 303 aa10.58□□□□□ -0.72
PABPC1-208ENST00000519004 PI4KAP42356 2102 aa10.58□□□□□ -0.72
PABPC1-208ENST00000519004 F8VRH5 84 aa10.57□□□□□ -0.72
PABPC1-208ENST00000519004 M0R3E3 92 aa10.57□□□□□ -0.72
PABPC1-208ENST00000519004 EGR2P11161 476 aaPredicted RBP10.57□□□□□ -0.72
PABPC1-208ENST00000519004 PVRIGQ6DKI7 326 aa10.57□□□□□ -0.72
PABPC1-208ENST00000519004 HCP5Q6MZN7 132 aa10.57□□□□□ -0.72
PABPC1-208ENST00000519004 C6orf15Q6UXA7 325 aaPredicted RBP10.57□□□□□ -0.72
PABPC1-208ENST00000519004 RPUSD1Q9UJJ7 312 aaKnown RBP10.57□□□□□ -0.72
PABPC1-208ENST00000519004 DSCAML1Q8TD84 2053 aa10.57□□□□□ -0.72
PABPC1-208ENST00000519004 WDR87Q6ZQQ6 2873 aa10.57□□□□□ -0.72
PABPC1-208ENST00000519004 CRIP2P52943 208 aaPredicted RBP10.57□□□□□ -0.72
PABPC1-208ENST00000519004 SPINK14Q6IE38 97 aa10.57□□□□□ -0.72
PABPC1-208ENST00000519004 ZNF833PQ6ZTB9 187 aa10.57□□□□□ -0.72
PABPC1-208ENST00000519004 TMEM190Q8WZ59 177 aa10.57□□□□□ -0.72
PABPC1-208ENST00000519004 FRYLO94915 3013 aa10.56□□□□□ -0.72
PABPC1-208ENST00000519004 H7C1H1 209 aa10.56□□□□□ -0.72
PABPC1-208ENST00000519004 EFNA4P52798 201 aa10.56□□□□□ -0.72
PABPC1-208ENST00000519004 DUX4L9Q6RFH8 374 aaPredicted RBP10.56□□□□□ -0.72
PABPC1-208ENST00000519004 Q8N1Y9 231 aa10.56□□□□□ -0.72
PABPC1-208ENST00000519004 NGBQ9NPG2 151 aa10.56□□□□□ -0.72
PABPC1-208ENST00000519004 ARFGEF3Q5TH69 2177 aa10.56□□□□□ -0.72
PABPC1-208ENST00000519004 TRAV12-1A0A0B4J245 112 aa10.56□□□□□ -0.72
PABPC1-208ENST00000519004 C9JAW5 83 aa10.56□□□□□ -0.72
PABPC1-208ENST00000519004 SRSF9Q13242 221 aaKnown RBP eCLIP10.56□□□□□ -0.72
PABPC1-208ENST00000519004 PSMG3-AS1Q96PY0 264 aa10.56□□□□□ -0.72
PABPC1-208ENST00000519004 FREM2Q5SZK8 3169 aa10.56□□□□□ -0.72
PABPC1-208ENST00000519004 ZNF815PA8K554 130 aa10.55□□□□□ -0.72
PABPC1-208ENST00000519004 K7EM74 188 aa10.55□□□□□ -0.72
PABPC1-208ENST00000519004 PRADC1Q9BSG0 188 aa10.55□□□□□ -0.72
PABPC1-208ENST00000519004 ONECUT1Q9UBC0 465 aa10.55□□□□□ -0.72
PABPC1-208ENST00000519004 LAGE3Q14657 143 aa10.55□□□□□ -0.72
PABPC1-208ENST00000519004 LYPD1Q8N2G4 141 aa10.55□□□□□ -0.72
PABPC1-208ENST00000519004 NTN5Q8WTR8 489 aaPredicted RBP10.55□□□□□ -0.72
PABPC1-208ENST00000519004 DNAJC30Q96LL9 226 aa10.55□□□□□ -0.72
PABPC1-208ENST00000519004 CNFNQ9BYD5 112 aa10.55□□□□□ -0.72
PABPC1-208ENST00000519004 TPSG1Q9NRR2 321 aa10.55□□□□□ -0.72
PABPC1-208ENST00000519004 IGLV2-23P01705 113 aa10.54□□□□□ -0.72
PABPC1-208ENST00000519004 CFC1BP0CG36 223 aa10.54□□□□□ -0.72
PABPC1-208ENST00000519004 CFC1P0CG37 223 aa10.54□□□□□ -0.72
PABPC1-208ENST00000519004 COX6B1P14854 86 aa10.54□□□□□ -0.72
PABPC1-208ENST00000519004 SCGB1D4Q6XE38 83 aa10.54□□□□□ -0.72
PABPC1-208ENST00000519004 OR4C13Q8NGP0 309 aa10.54□□□□□ -0.72
PABPC1-208ENST00000519004 PRR25Q96S07 402 aa10.54□□□□□ -0.72
PABPC1-208ENST00000519004 HES7Q9BYE0 225 aa10.54□□□□□ -0.72
PABPC1-208ENST00000519004 C21orf62Q9NYP8 219 aa10.54□□□□□ -0.72
PABPC1-208ENST00000519004 COX8CQ7Z4L0 72 aa10.54□□□□□ -0.72
PABPC1-208ENST00000519004 C10orf126Q8N4M7 172 aa10.54□□□□□ -0.72
PABPC1-208ENST00000519004 CHCHD5Q9BSY4 110 aa10.54□□□□□ -0.72
PABPC1-208ENST00000519004 TRAV8-4A0A0B4J246 113 aa10.53□□□□□ -0.72
PABPC1-208ENST00000519004 LY6G6EA0A0G2JKS1 128 aa10.53□□□□□ -0.72
PABPC1-208ENST00000519004 LINC00694P0DN24 101 aa10.53□□□□□ -0.72
PABPC1-208ENST00000519004 IGHV1-2P23083 117 aa10.53□□□□□ -0.72
PABPC1-208ENST00000519004 FOLR3P41439 243 aa10.53□□□□□ -0.72
PABPC1-208ENST00000519004 ZNF80P51504 273 aaPredicted RBP10.53□□□□□ -0.72
PABPC1-208ENST00000519004 MRGPRG-AS1Q2M3A8 158 aa10.53□□□□□ -0.72
PABPC1-208ENST00000519004 IGF2-ASQ6U949 168 aa10.53□□□□□ -0.72
PABPC1-208ENST00000519004 FAM57AQ8TBR7 257 aa10.53□□□□□ -0.72
PABPC1-208ENST00000519004 SCNM1Q9BWG6 230 aa10.53□□□□□ -0.72
PABPC1-208ENST00000519004 U3KQA8 63 aa10.53□□□□□ -0.72
PABPC1-208ENST00000519004 INTS1Q8N201 2190 aaKnown RBP10.53□□□□□ -0.72
PABPC1-208ENST00000519004 LYZL6O75951 148 aa10.53□□□□□ -0.72
PABPC1-208ENST00000519004 FAM201AQ5SY85 155 aa10.53□□□□□ -0.72
PABPC1-208ENST00000519004 TRPT1Q86TN4 253 aaKnown RBP10.53□□□□□ -0.72
PABPC1-208ENST00000519004 DTX2Q86UW9 622 aa10.53□□□□□ -0.72
PABPC1-208ENST00000519004 LINC00574Q9H8X3 128 aa10.53□□□□□ -0.72
PABPC1-208ENST00000519004 MRPS12O15235 138 aaKnown RBP10.52□□□□□ -0.73
PABPC1-208ENST00000519004 CEACAM4O75871 244 aa10.52□□□□□ -0.73
PABPC1-208ENST00000519004 SHANK2-AS3Q9BTD1 123 aa10.52□□□□□ -0.73
PABPC1-208ENST00000519004 H3BRN7 92 aa10.52□□□□□ -0.73
PABPC1-208ENST00000519004 SLC25A16P16260 332 aa10.52□□□□□ -0.73
PABPC1-208ENST00000519004 CD40P25942 277 aa10.52□□□□□ -0.73
PABPC1-208ENST00000519004 VKORC1Q9BQB6 163 aa10.52□□□□□ -0.73
PABPC1-208ENST00000519004 DSCAMO60469 2012 aa10.51□□□□□ -0.73
PABPC1-208ENST00000519004 RPL13AP40429 203 aaKnown RBP10.51□□□□□ -0.73
PABPC1-208ENST00000519004 FOXC1Q12948 553 aa10.51□□□□□ -0.73
PABPC1-208ENST00000519004 TDHQ8IZJ6 230 aa10.51□□□□□ -0.73
PABPC1-208ENST00000519004 NRACQ8N912 160 aa10.51□□□□□ -0.73
PABPC1-208ENST00000519004 TRIOO75962 3097 aa10.51□□□□□ -0.73
PABPC1-208ENST00000519004 SMIM9A6NGZ8 99 aa10.5□□□□□ -0.73
PABPC1-208ENST00000519004 APELAP0DMC3 54 aa10.5□□□□□ -0.73
PABPC1-208ENST00000519004 TMEM155Q4W5P6 130 aa10.5□□□□□ -0.73
PABPC1-208ENST00000519004 TTTY12Q9BZ98 90 aa10.5□□□□□ -0.73
PABPC1-208ENST00000519004 DNAJC13O75165 2243 aa10.5□□□□□ -0.73
PABPC1-208ENST00000519004 IGKV2-40A0A087WW87 121 aaPredicted RBP10.5□□□□□ -0.73
PABPC1-208ENST00000519004 TRAV2A0A0B4J234 112 aa10.5□□□□□ -0.73
PABPC1-208ENST00000519004 LOC107984640A0A0U1RRK4 108 aa10.5□□□□□ -0.73
PABPC1-208ENST00000519004 TEX49A0A1B0GTD5 131 aa10.5□□□□□ -0.73
PABPC1-208ENST00000519004 DUSP14O95147 198 aaKnown RBP10.5□□□□□ -0.73
PABPC1-208ENST00000519004 IGKV2D-40P01614 121 aaPredicted RBP10.5□□□□□ -0.73
PABPC1-208ENST00000519004 PF4V1P10720 104 aa10.5□□□□□ -0.73
PABPC1-208ENST00000519004 IL11RAQ14626 422 aa10.5□□□□□ -0.73
PABPC1-208ENST00000519004 NEXN-AS1Q8NBZ9 246 aa10.5□□□□□ -0.73
PABPC1-208ENST00000519004 PRR14LQ5THK1 2151 aa10.5□□□□□ -0.73
PABPC1-208ENST00000519004 SDK1Q7Z5N4 2213 aa10.5□□□□□ -0.73
PABPC1-208ENST00000519004 A0A0J9YY99 117 aa10.49□□□□□ -0.73
PABPC1-208ENST00000519004 LHBP01229 141 aa10.49□□□□□ -0.73
PABPC1-208ENST00000519004 IGHV3-30P01768 117 aa10.49□□□□□ -0.73
PABPC1-208ENST00000519004 IGHV3-30-5P0DP03 117 aa10.49□□□□□ -0.73
PABPC1-208ENST00000519004 MZT1Q08AG7 82 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 209.8 ms