RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 LRRN1Q6UXK5 716 aa-4.29□□□□□ -3.1
RNU6-539P-201ENST00000516665 OR4S1Q8NGB4 309 aa-4.29□□□□□ -3.1
RNU6-539P-201ENST00000516665 EEF1AKMT1Q8WVE0 214 aa-4.29□□□□□ -3.1
RNU6-539P-201ENST00000516665 CHCHD1Q96BP2 118 aaKnown RBP-4.29□□□□□ -3.1
RNU6-539P-201ENST00000516665 MPHOSPH10O00566 681 aaKnown RBP-4.3□□□□□ -3.1
RNU6-539P-201ENST00000516665 KLRD1Q13241 179 aa-4.3□□□□□ -3.1
RNU6-539P-201ENST00000516665 OR5AK3PQ8NH89 298 aa-4.3□□□□□ -3.1
RNU6-539P-201ENST00000516665 ZNF142P52746 1687 aaPredicted RBP-4.3□□□□□ -3.1
RNU6-539P-201ENST00000516665 ZMYM4Q5VZL5 1548 aa-4.31□□□□□ -3.1
RNU6-539P-201ENST00000516665 SNX4O95219 450 aa-4.31□□□□□ -3.1
RNU6-539P-201ENST00000516665 AESQ08117 197 aa-4.31□□□□□ -3.1
RNU6-539P-201ENST00000516665 IZUMO2Q6UXV1 221 aa-4.31□□□□□ -3.1
RNU6-539P-201ENST00000516665 JOSD2Q8TAC2 188 aa-4.31□□□□□ -3.1
RNU6-539P-201ENST00000516665 STOML3Q8TAV4 291 aa-4.31□□□□□ -3.1
RNU6-539P-201ENST00000516665 DERL2Q9GZP9 239 aa-4.31□□□□□ -3.1
RNU6-539P-201ENST00000516665 CYSLTR1Q9Y271 337 aa-4.31□□□□□ -3.1
RNU6-539P-201ENST00000516665 FER1L6Q2WGJ9 1857 aa-4.32□□□□□ -3.1
RNU6-539P-201ENST00000516665 DYNC2H1Q8NCM8 4307 aaKnown RBP-4.32□□□□□ -3.1
RNU6-539P-201ENST00000516665 PEX19P40855 299 aa-4.32□□□□□ -3.1
RNU6-539P-201ENST00000516665 AHSA2Q719I0 299 aa-4.32□□□□□ -3.1
RNU6-539P-201ENST00000516665 RIBC1Q8N443 379 aaPredicted RBP-4.32□□□□□ -3.1
RNU6-539P-201ENST00000516665 TCTEX1D1Q8N7M0 179 aa-4.32□□□□□ -3.1
RNU6-539P-201ENST00000516665 MT1LQ93083 61 aa-4.32□□□□□ -3.1
RNU6-539P-201ENST00000516665 RSPH9Q9H1X1 276 aaPredicted RBP-4.32□□□□□ -3.1
RNU6-539P-201ENST00000516665 ATG5Q9H1Y0 275 aa-4.32□□□□□ -3.1
RNU6-539P-201ENST00000516665 TMEM133Q9H2Q1 129 aa-4.32□□□□□ -3.1
RNU6-539P-201ENST00000516665 STMN3Q9NZ72 180 aa-4.32□□□□□ -3.1
RNU6-539P-201ENST00000516665 TRGV10A0A0A0MS01 117 aa-4.33□□□□□ -3.1
RNU6-539P-201ENST00000516665 EXOC1LA0A1B0GW35 172 aa-4.33□□□□□ -3.1
RNU6-539P-201ENST00000516665 A0A1B0GW64 132 aa-4.33□□□□□ -3.1
RNU6-539P-201ENST00000516665 DAPL1A0PJW8 107 aa-4.33□□□□□ -3.1
RNU6-539P-201ENST00000516665 H0Y8G0 127 aa-4.33□□□□□ -3.1
RNU6-539P-201ENST00000516665 SERPINE1P05121 402 aa-4.33□□□□□ -3.1
RNU6-539P-201ENST00000516665 DESP17661 470 aa-4.33□□□□□ -3.1
RNU6-539P-201ENST00000516665 SULT1E1P49888 294 aa-4.33□□□□□ -3.1
RNU6-539P-201ENST00000516665 DAOAP59103 153 aa-4.33□□□□□ -3.1
RNU6-539P-201ENST00000516665 CXCR4P61073 352 aa-4.33□□□□□ -3.1
RNU6-539P-201ENST00000516665 FADDQ13158 208 aa-4.33□□□□□ -3.1
RNU6-539P-201ENST00000516665 VMA21Q3ZAQ7 101 aa-4.33□□□□□ -3.1
RNU6-539P-201ENST00000516665 COQ5Q5HYK3 327 aa-4.33□□□□□ -3.1
RNU6-539P-201ENST00000516665 CCDC12Q8WUD4 166 aaPredicted RBP-4.33□□□□□ -3.1
RNU6-539P-201ENST00000516665 IFT81Q8WYA0 676 aa-4.33□□□□□ -3.1
RNU6-539P-201ENST00000516665 DKKL1Q9UK85 242 aa-4.33□□□□□ -3.1
RNU6-539P-201ENST00000516665 ZNF609O15014 1411 aa-4.33□□□□□ -3.1
RNU6-539P-201ENST00000516665 NEURL4Q96JN8 1562 aa-4.33□□□□□ -3.1
RNU6-539P-201ENST00000516665 MYO15AQ9UKN7 3530 aa-4.33□□□□□ -3.1
RNU6-539P-201ENST00000516665 A0A1B0GTQ1 180 aa-4.34□□□□□ -3.1
RNU6-539P-201ENST00000516665 IL7P13232 177 aa-4.34□□□□□ -3.1
RNU6-539P-201ENST00000516665 HIST1H1TP22492 207 aaPredicted RBP-4.34□□□□□ -3.1
RNU6-539P-201ENST00000516665 S100A3P33764 101 aa-4.34□□□□□ -3.1
RNU6-539P-201ENST00000516665 CAPZBP47756 277 aa-4.34□□□□□ -3.1
RNU6-539P-201ENST00000516665 OR2F1Q13607 317 aa-4.34□□□□□ -3.1
RNU6-539P-201ENST00000516665 TAF1AQ15573 450 aaPredicted RBP-4.34□□□□□ -3.1
RNU6-539P-201ENST00000516665 SSX6Q7RTT6 188 aa-4.34□□□□□ -3.1
RNU6-539P-201ENST00000516665 DEFB125Q8N687 156 aa-4.34□□□□□ -3.1
RNU6-539P-201ENST00000516665 OR5A2Q8NGI9 324 aa-4.34□□□□□ -3.1
RNU6-539P-201ENST00000516665 STAG3L4Q8TBR4 150 aa-4.34□□□□□ -3.1
RNU6-539P-201ENST00000516665 LGALS14Q8TCE9 139 aa-4.34□□□□□ -3.1
RNU6-539P-201ENST00000516665 AMELXQ99217 191 aa-4.34□□□□□ -3.1
RNU6-539P-201ENST00000516665 FAM96AQ9H5X1 160 aa-4.34□□□□□ -3.1
RNU6-539P-201ENST00000516665 MRPL22Q9NWU5 206 aaKnown RBP-4.34□□□□□ -3.1
RNU6-539P-201ENST00000516665 RIMS2Q9UQ26 1411 aa-4.35□□□□□ -3.11
RNU6-539P-201ENST00000516665 KIAA0232Q92628 1395 aa-4.35□□□□□ -3.11
RNU6-539P-201ENST00000516665 DEGS1O15121 323 aa-4.35□□□□□ -3.11
RNU6-539P-201ENST00000516665 MFSD11O43934 449 aa-4.35□□□□□ -3.11
RNU6-539P-201ENST00000516665 FLOT2Q14254 428 aa-4.35□□□□□ -3.11
RNU6-539P-201ENST00000516665 CFAP126Q5VTH2 177 aa-4.35□□□□□ -3.11
RNU6-539P-201ENST00000516665 SLC48A1Q6P1K1 146 aa-4.35□□□□□ -3.11
RNU6-539P-201ENST00000516665 C22orf39Q6P5X5 142 aa-4.35□□□□□ -3.11
RNU6-539P-201ENST00000516665 C20orf196Q8IYI0 205 aa-4.35□□□□□ -3.11
RNU6-539P-201ENST00000516665 LYRM1O43325 122 aa-4.36□□□□□ -3.11
RNU6-539P-201ENST00000516665 IDO1P14902 403 aa-4.36□□□□□ -3.11
RNU6-539P-201ENST00000516665 GOLT1AQ6ZVE7 132 aa-4.36□□□□□ -3.11
RNU6-539P-201ENST00000516665 BLIDQ8IZY5 108 aa-4.36□□□□□ -3.11
RNU6-539P-201ENST00000516665 PIGXQ8TBF5 258 aa-4.36□□□□□ -3.11
RNU6-539P-201ENST00000516665 GLYATL2Q8WU03 294 aa-4.36□□□□□ -3.11
RNU6-539P-201ENST00000516665 EXO5Q9H790 373 aa-4.36□□□□□ -3.11
RNU6-539P-201ENST00000516665 NEO1Q92859 1461 aa-4.37□□□□□ -3.11
RNU6-539P-201ENST00000516665 ZFHX4Q86UP3 3567 aa-4.37□□□□□ -3.11
RNU6-539P-201ENST00000516665 ROBO3Q96MS0 1386 aa-4.37□□□□□ -3.11
RNU6-539P-201ENST00000516665 BBIP1A8MTZ0 92 aa-4.37□□□□□ -3.11
RNU6-539P-201ENST00000516665 ATP5J2P56134 94 aa-4.37□□□□□ -3.11
RNU6-539P-201ENST00000516665 C4orf33Q8N1A6 199 aa-4.37□□□□□ -3.11
RNU6-539P-201ENST00000516665 EXTL2Q9UBQ6 330 aa-4.37□□□□□ -3.11
RNU6-539P-201ENST00000516665 SCP2D1Q9UJQ7 156 aa-4.37□□□□□ -3.11
RNU6-539P-201ENST00000516665 GAPVD1Q14C86 1478 aa-4.37□□□□□ -3.11
RNU6-539P-201ENST00000516665 TRAV1-2A0A0B4J238 106 aa-4.38□□□□□ -3.11
RNU6-539P-201ENST00000516665 FAM159BA6NKW6 160 aa-4.38□□□□□ -3.11
RNU6-539P-201ENST00000516665 IVLP07476 585 aa-4.38□□□□□ -3.11
RNU6-539P-201ENST00000516665 NQO2P16083 231 aa-4.38□□□□□ -3.11
RNU6-539P-201ENST00000516665 SDC4P31431 198 aa-4.38□□□□□ -3.11
RNU6-539P-201ENST00000516665 BASP1P80723 227 aaKnown RBP-4.38□□□□□ -3.11
RNU6-539P-201ENST00000516665 MYL5Q02045 173 aa-4.38□□□□□ -3.11
RNU6-539P-201ENST00000516665 HLA-DRB5Q30154 266 aa-4.38□□□□□ -3.11
RNU6-539P-201ENST00000516665 CDRT4Q8N9R6 151 aa-4.38□□□□□ -3.11
RNU6-539P-201ENST00000516665 MAFIPQ8WZ33 124 aa-4.38□□□□□ -3.11
RNU6-539P-201ENST00000516665 OR51I1Q9H343 314 aa-4.38□□□□□ -3.11
RNU6-539P-201ENST00000516665 SPTAN1Q13813 2472 aaKnown RBP-4.39□□□□□ -3.11
RNU6-539P-201ENST00000516665 CCL3L1P16619 93 aa-4.39□□□□□ -3.11
RNU6-539P-201ENST00000516665 SRP14P37108 136 aaKnown RBP-4.39□□□□□ -3.11
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms