RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 LINC01587Q99440 93 aa18.75■□□□□ 0.59
DDR1-279ENST00000515529 AGPAT4-IT1Q9H0P7 198 aa18.75■□□□□ 0.59
DDR1-279ENST00000515529 RPH3ALQ9UNE2 315 aa18.75■□□□□ 0.59
DDR1-279ENST00000515529 SSX7Q7RTT5 188 aa18.74■□□□□ 0.59
DDR1-279ENST00000515529 ZNF726P1Q15940 193 aa18.73■□□□□ 0.59
DDR1-279ENST00000515529 VGLL1Q99990 258 aa18.73■□□□□ 0.59
DDR1-279ENST00000515529 RBAKDNA6NC62 111 aa18.72■□□□□ 0.59
DDR1-279ENST00000515529 UMAD1C9J7I0 102 aa18.72■□□□□ 0.59
DDR1-279ENST00000515529 DIRC3C9JPN6 131 aa18.72■□□□□ 0.59
DDR1-279ENST00000515529 EMP1P54849 157 aa18.72■□□□□ 0.59
DDR1-279ENST00000515529 LGALSLQ3ZCW2 172 aaPredicted RBP18.72■□□□□ 0.59
DDR1-279ENST00000515529 STOML3Q8TAV4 291 aa18.72■□□□□ 0.59
DDR1-279ENST00000515529 C20orf144Q9BQM9 153 aa18.72■□□□□ 0.59
DDR1-279ENST00000515529 DNAH7Q8WXX0 4024 aa18.71■□□□□ 0.59
DDR1-279ENST00000515529 LOC102723971A0A1B0GUV8 181 aa18.71■□□□□ 0.59
DDR1-279ENST00000515529 A0A1B0GVG6 124 aa18.71■□□□□ 0.59
DDR1-279ENST00000515529 MAP1LC3B2A6NCE7 125 aa18.71■□□□□ 0.59
DDR1-279ENST00000515529 SLC25A5P05141 298 aaKnown RBP18.71■□□□□ 0.59
DDR1-279ENST00000515529 ZNF138P52744 262 aa18.71■□□□□ 0.59
DDR1-279ENST00000515529 NANOS2P60321 138 aaKnown RBP18.71■□□□□ 0.59
DDR1-279ENST00000515529 ZFP69Q49AA0 526 aa18.71■□□□□ 0.59
DDR1-279ENST00000515529 GFI1BQ5VTD9 330 aa18.71■□□□□ 0.59
DDR1-279ENST00000515529 SUN5Q8TC36 379 aa18.71■□□□□ 0.59
DDR1-279ENST00000515529 MAP1LC3BQ9GZQ8 125 aa18.71■□□□□ 0.59
DDR1-279ENST00000515529 ZNF705GA8MUZ8 300 aaPredicted RBP18.7■□□□□ 0.58
DDR1-279ENST00000515529 FGF8P55075 233 aaPredicted RBP18.7■□□□□ 0.58
DDR1-279ENST00000515529 EIF5AL1Q6IS14 154 aaKnown RBP18.7■□□□□ 0.58
DDR1-279ENST00000515529 ARL6IP6Q8N6S5 226 aa18.7■□□□□ 0.58
DDR1-279ENST00000515529 NIPSNAP3BQ9BS92 247 aa18.7■□□□□ 0.58
DDR1-279ENST00000515529 H7BYZ3 331 aa18.69■□□□□ 0.58
DDR1-279ENST00000515529 HTN1P15515 57 aa18.69■□□□□ 0.58
DDR1-279ENST00000515529 TAS2R60P59551 318 aa18.69■□□□□ 0.58
DDR1-279ENST00000515529 KIR3DS1Q14943 382 aa18.69■□□□□ 0.58
DDR1-279ENST00000515529 FAM213BQ8TBF2 198 aa18.69■□□□□ 0.58
DDR1-279ENST00000515529 TMED6Q8WW62 240 aa18.69■□□□□ 0.58
DDR1-279ENST00000515529 ZNF492Q9P255 531 aa18.69■□□□□ 0.58
DDR1-279ENST00000515529 TRAV12-3A0A0B4J271 114 aa18.68■□□□□ 0.58
DDR1-279ENST00000515529 NUPR2A6NF83 97 aa18.68■□□□□ 0.58
DDR1-279ENST00000515529 GPX1P07203 203 aa18.68■□□□□ 0.58
DDR1-279ENST00000515529 GOLT1AQ6ZVE7 132 aa18.68■□□□□ 0.58
DDR1-279ENST00000515529 C5orf17Q8NAS9 161 aa18.68■□□□□ 0.58
DDR1-279ENST00000515529 TEX48A0A1B0GUV7 120 aa18.67■□□□□ 0.58
DDR1-279ENST00000515529 K7EQM0 130 aa18.67■□□□□ 0.58
DDR1-279ENST00000515529 SPART-AS1P0CW21 52 aa18.67■□□□□ 0.58
DDR1-279ENST00000515529 DPPA3Q6W0C5 159 aa18.67■□□□□ 0.58
DDR1-279ENST00000515529 Q8TAT8 98 aa18.67■□□□□ 0.58
DDR1-279ENST00000515529 TMPRSS5Q9H3S3 457 aa18.67■□□□□ 0.58
DDR1-279ENST00000515529 C7orf71A4D174 169 aa18.66■□□□□ 0.58
DDR1-279ENST00000515529 NMBP08949 121 aa18.66■□□□□ 0.58
DDR1-279ENST00000515529 CRISP2P16562 243 aa18.66■□□□□ 0.58
DDR1-279ENST00000515529 RNASE4P34096 147 aaKnown RBP18.66■□□□□ 0.58
DDR1-279ENST00000515529 FHITP49789 147 aa18.66■□□□□ 0.58
DDR1-279ENST00000515529 SUMO1P63165 101 aaKnown RBP18.66■□□□□ 0.58
DDR1-279ENST00000515529 GNG5P63218 68 aa18.66■□□□□ 0.58
DDR1-279ENST00000515529 CD300CQ08708 224 aa18.66■□□□□ 0.58
DDR1-279ENST00000515529 PHLDA1Q8WV24 401 aaPredicted RBP18.66■□□□□ 0.58
DDR1-279ENST00000515529 FAM19A4Q96LR4 140 aa18.66■□□□□ 0.58
DDR1-279ENST00000515529 TRBV7-9A0A0J9YWB2 115 aa18.65■□□□□ 0.58
DDR1-279ENST00000515529 SERTM2A0A1B0GWG4 89 aa18.65■□□□□ 0.58
DDR1-279ENST00000515529 A0A1W2PRE2 83 aa18.65■□□□□ 0.58
DDR1-279ENST00000515529 KLLNB2CW77 178 aa18.65■□□□□ 0.58
DDR1-279ENST00000515529 UBE2G2P60604 165 aa18.65■□□□□ 0.58
DDR1-279ENST00000515529 SLC51BQ86UW2 128 aa18.65■□□□□ 0.58
DDR1-279ENST00000515529 CCDC28AQ8IWP9 274 aa18.65■□□□□ 0.58
DDR1-279ENST00000515529 SFT2D1Q8WV19 159 aa18.65■□□□□ 0.58
DDR1-279ENST00000515529 CELA1Q9UNI1 258 aa18.65■□□□□ 0.58
DDR1-279ENST00000515529 YTHDF2Q9Y5A9 579 aaKnown RBP18.65■□□□□ 0.58
DDR1-279ENST00000515529 CEMP1Q6PRD7 247 aaPredicted RBP18.64■□□□□ 0.57
DDR1-279ENST00000515529 KLK5Q9Y337 293 aaPredicted RBP18.64■□□□□ 0.57
DDR1-279ENST00000515529 LENEPQ9Y5L5 61 aa18.64■□□□□ 0.57
DDR1-279ENST00000515529 GGTLC3B5MD39 225 aa18.63■□□□□ 0.57
DDR1-279ENST00000515529 IFNA7P01567 189 aa18.63■□□□□ 0.57
DDR1-279ENST00000515529 PRM2P04554 102 aa18.63■□□□□ 0.57
DDR1-279ENST00000515529 BTN1A1Q13410 526 aa18.63■□□□□ 0.57
DDR1-279ENST00000515529 C16orf74Q96GX8 76 aa18.63■□□□□ 0.57
DDR1-279ENST00000515529 NKX6-2Q9C056 277 aaPredicted RBP18.63■□□□□ 0.57
DDR1-279ENST00000515529 PLA2G2EQ9NZK7 142 aa18.63■□□□□ 0.57
DDR1-279ENST00000515529 FAM222AQ5U5X8 452 aa18.62■□□□□ 0.57
DDR1-279ENST00000515529 ZNF493Q6ZR52 646 aa18.62■□□□□ 0.57
DDR1-279ENST00000515529 C9orf62Q8N4C0 152 aa18.62■□□□□ 0.57
DDR1-279ENST00000515529 ZFAND2AQ8N6M9 145 aa18.62■□□□□ 0.57
DDR1-279ENST00000515529 PYGO2Q9BRQ0 406 aa18.62■□□□□ 0.57
DDR1-279ENST00000515529 EPDR1Q9UM22 224 aa18.62■□□□□ 0.57
DDR1-279ENST00000515529 C11orf94C9JXX5 98 aa18.61■□□□□ 0.57
DDR1-279ENST00000515529 TCRAP04437 139 aa18.61■□□□□ 0.57
DDR1-279ENST00000515529 H2AFB1P0C5Y9 115 aa18.61■□□□□ 0.57
DDR1-279ENST00000515529 RAB5CP51148 216 aa18.61■□□□□ 0.57
DDR1-279ENST00000515529 MBD3L1Q8WWY6 194 aa18.61■□□□□ 0.57
DDR1-279ENST00000515529 NDFIP1Q9BT67 221 aa18.61■□□□□ 0.57
DDR1-279ENST00000515529 DKK2Q9UBU2 259 aa18.61■□□□□ 0.57
DDR1-279ENST00000515529 AZU1P20160 251 aa18.6■□□□□ 0.57
DDR1-279ENST00000515529 ZNF767PQ75MW2 155 aa18.6■□□□□ 0.57
DDR1-279ENST00000515529 TMEM263Q8WUH6 116 aaKnown RBP18.6■□□□□ 0.57
DDR1-279ENST00000515529 TRAV8-1A0A0A6YYK1 113 aa18.59■□□□□ 0.57
DDR1-279ENST00000515529 A0A1B0GV50 99 aa18.59■□□□□ 0.57
DDR1-279ENST00000515529 C12orf74Q32Q52 190 aa18.59■□□□□ 0.57
DDR1-279ENST00000515529 Q6ZTC4 211 aa18.59■□□□□ 0.57
DDR1-279ENST00000515529 CYB561D1Q8N8Q1 229 aa18.59■□□□□ 0.57
DDR1-279ENST00000515529 ATG101Q9BSB4 218 aa18.59■□□□□ 0.57
DDR1-279ENST00000515529 TRAV10A0A0B4J240 114 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms