RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 IGHV4-30-4P0DP06 118 aa8.82□□□□□ -1
PDLIM5-220ENST00000514830 GNG5P63218 68 aa8.82□□□□□ -1
PDLIM5-220ENST00000514830 ZNF124Q15973 351 aa8.82□□□□□ -1
PDLIM5-220ENST00000514830 MORN3Q6PF18 240 aaPredicted RBP8.82□□□□□ -1
PDLIM5-220ENST00000514830 AMTNQ6UX39 209 aa8.82□□□□□ -1
PDLIM5-220ENST00000514830 GOLT1AQ6ZVE7 132 aa8.82□□□□□ -1
PDLIM5-220ENST00000514830 KIR2DL5AQ8N109 375 aa8.82□□□□□ -1
PDLIM5-220ENST00000514830 KIR2DL5BQ8NHK3 375 aa8.82□□□□□ -1
PDLIM5-220ENST00000514830 C2CD4CQ8TF44 421 aa8.82□□□□□ -1
PDLIM5-220ENST00000514830 FAM19A4Q96LR4 140 aa8.82□□□□□ -1
PDLIM5-220ENST00000514830 RARRES2Q99969 163 aa8.82□□□□□ -1
PDLIM5-220ENST00000514830 AGPAT4-IT1Q9H0P7 198 aa8.82□□□□□ -1
PDLIM5-220ENST00000514830 IGKV2-40A0A087WW87 121 aaPredicted RBP8.81□□□□□ -1
PDLIM5-220ENST00000514830 LINC00862A6NCI5 91 aa8.81□□□□□ -1
PDLIM5-220ENST00000514830 IGKV2D-40P01614 121 aaPredicted RBP8.81□□□□□ -1
PDLIM5-220ENST00000514830 CRISP2P16562 243 aa8.81□□□□□ -1
PDLIM5-220ENST00000514830 DEFB1P60022 68 aa8.81□□□□□ -1
PDLIM5-220ENST00000514830 HIST1H1AQ02539 215 aaPredicted RBP8.81□□□□□ -1
PDLIM5-220ENST00000514830 TMEM183BQ1AE95 376 aa8.81□□□□□ -1
PDLIM5-220ENST00000514830 TOR2AQ5JU69 321 aa8.81□□□□□ -1
PDLIM5-220ENST00000514830 TMEM78Q5T7P6 136 aa8.81□□□□□ -1
PDLIM5-220ENST00000514830 FMC1Q96HJ9 113 aa8.81□□□□□ -1
PDLIM5-220ENST00000514830 VGLL1Q99990 258 aa8.81□□□□□ -1
PDLIM5-220ENST00000514830 ZNF492Q9P255 531 aa8.81□□□□□ -1
PDLIM5-220ENST00000514830 LOC102724200A0A096LPH7 203 aaPredicted RBP8.8□□□□□ -1
PDLIM5-220ENST00000514830 SCO2A0A1W2PP80 73 aa8.8□□□□□ -1
PDLIM5-220ENST00000514830 RBMY1BA6NDE4 496 aaKnown RBP8.8□□□□□ -1
PDLIM5-220ENST00000514830 RBMY1EA6NEQ0 496 aaKnown RBP8.8□□□□□ -1
PDLIM5-220ENST00000514830 AMBPP02760 352 aa8.8□□□□□ -1
PDLIM5-220ENST00000514830 RBMY1DP0C7P1 496 aaKnown RBP8.8□□□□□ -1
PDLIM5-220ENST00000514830 ZNF138P52744 262 aa8.8□□□□□ -1
PDLIM5-220ENST00000514830 NUTF2P61970 127 aaKnown RBP8.8□□□□□ -1
PDLIM5-220ENST00000514830 PEA15Q15121 130 aa8.8□□□□□ -1
PDLIM5-220ENST00000514830 COX8CQ7Z4L0 72 aa8.8□□□□□ -1
PDLIM5-220ENST00000514830 EIF4E3Q8N5X7 224 aaKnown RBP8.8□□□□□ -1
PDLIM5-220ENST00000514830 EIF5A2Q9GZV4 153 aaKnown RBP8.8□□□□□ -1
PDLIM5-220ENST00000514830 TUBA4BQ9H853 241 aa8.8□□□□□ -1
PDLIM5-220ENST00000514830 UBE2CO00762 179 aa8.79□□□□□ -1
PDLIM5-220ENST00000514830 ZNF705DP0CH99 300 aaPredicted RBP8.79□□□□□ -1
PDLIM5-220ENST00000514830 ZNF705BP0CI00 300 aaPredicted RBP8.79□□□□□ -1
PDLIM5-220ENST00000514830 CT45A10P0DMU9 189 aa8.79□□□□□ -1
PDLIM5-220ENST00000514830 TSPOP30536 169 aa8.79□□□□□ -1
PDLIM5-220ENST00000514830 TAS2R60P59551 318 aa8.79□□□□□ -1
PDLIM5-220ENST00000514830 FLI1Q01543 452 aaPredicted RBP8.79□□□□□ -1
PDLIM5-220ENST00000514830 UQCC3Q6UW78 93 aa8.79□□□□□ -1
PDLIM5-220ENST00000514830 PSG8Q9UQ74 426 aa8.79□□□□□ -1
PDLIM5-220ENST00000514830 ZFP30Q9Y2G7 519 aa8.79□□□□□ -1
PDLIM5-220ENST00000514830 KLLNB2CW77 178 aa8.78□□□□□ -1
PDLIM5-220ENST00000514830 LTAP01374 205 aa8.78□□□□□ -1
PDLIM5-220ENST00000514830 SRP19P09132 144 aaKnown RBP8.78□□□□□ -1
PDLIM5-220ENST00000514830 LEPP41159 167 aa8.78□□□□□ -1
PDLIM5-220ENST00000514830 AKR1C3P42330 323 aa8.78□□□□□ -1
PDLIM5-220ENST00000514830 CDKN1BP46527 198 aa8.78□□□□□ -1
PDLIM5-220ENST00000514830 APOC4P55056 127 aa8.78□□□□□ -1
PDLIM5-220ENST00000514830 ERCC8Q13216 396 aa8.78□□□□□ -1
PDLIM5-220ENST00000514830 SAPCD1Q5SSQ6 148 aa8.78□□□□□ -1
PDLIM5-220ENST00000514830 Q86TA4 180 aa8.78□□□□□ -1
PDLIM5-220ENST00000514830 OR4B1Q8NGF8 309 aa8.78□□□□□ -1
PDLIM5-220ENST00000514830 SMIM12Q96EX1 92 aa8.78□□□□□ -1
PDLIM5-220ENST00000514830 C20orf144Q9BQM9 153 aa8.78□□□□□ -1
PDLIM5-220ENST00000514830 C1QTNF4Q9BXJ3 329 aa8.78□□□□□ -1
PDLIM5-220ENST00000514830 CSTL1Q9H114 145 aa8.78□□□□□ -1
PDLIM5-220ENST00000514830 RPH3ALQ9UNE2 315 aa8.78□□□□□ -1
PDLIM5-220ENST00000514830 TRAV8-1A0A0A6YYK1 113 aa8.77□□□□□ -1.01
PDLIM5-220ENST00000514830 PRB2P02812 416 aaPredicted RBP8.77□□□□□ -1.01
PDLIM5-220ENST00000514830 GIG44P09565 113 aaPredicted RBP8.77□□□□□ -1.01
PDLIM5-220ENST00000514830 FRMD6-AS1P0C7T7 363 aa8.77□□□□□ -1.01
PDLIM5-220ENST00000514830 RPL35P42766 123 aaKnown RBP8.77□□□□□ -1.01
PDLIM5-220ENST00000514830 UBE2G1P62253 170 aa8.77□□□□□ -1.01
PDLIM5-220ENST00000514830 ZFAND2AQ8N6M9 145 aa8.77□□□□□ -1.01
PDLIM5-220ENST00000514830 IGF2BP2-AS1Q96M15 143 aa8.77□□□□□ -1.01
PDLIM5-220ENST00000514830 LINC00479Q96M42 142 aa8.77□□□□□ -1.01
PDLIM5-220ENST00000514830 SLC35B3Q9H1N7 401 aa8.77□□□□□ -1.01
PDLIM5-220ENST00000514830 C9JCJ5 164 aa8.76□□□□□ -1.01
PDLIM5-220ENST00000514830 RPL35AP18077 110 aaKnown RBP8.76□□□□□ -1.01
PDLIM5-220ENST00000514830 SRSF3P84103 164 aaKnown RBP8.76□□□□□ -1.01
PDLIM5-220ENST00000514830 FAM74A3Q4VXF1 159 aa8.76□□□□□ -1.01
PDLIM5-220ENST00000514830 Q6ZWC4 215 aa8.76□□□□□ -1.01
PDLIM5-220ENST00000514830 TMEM183AQ8IXX5 376 aa8.76□□□□□ -1.01
PDLIM5-220ENST00000514830 Q8TAT8 98 aa8.76□□□□□ -1.01
PDLIM5-220ENST00000514830 TVP23CQ96ET8 276 aa8.76□□□□□ -1.01
PDLIM5-220ENST00000514830 NDFIP1Q9BT67 221 aa8.76□□□□□ -1.01
PDLIM5-220ENST00000514830 MLST8Q9BVC4 326 aa8.76□□□□□ -1.01
PDLIM5-220ENST00000514830 TRAV34A0A0B4J273 112 aa8.75□□□□□ -1.01
PDLIM5-220ENST00000514830 C9JQL5 133 aa8.75□□□□□ -1.01
PDLIM5-220ENST00000514830 CRXO43186 299 aaPredicted RBP8.75□□□□□ -1.01
PDLIM5-220ENST00000514830 IGKV3-20P01619 116 aa8.75□□□□□ -1.01
PDLIM5-220ENST00000514830 PRNTQ86SH4 94 aa8.75□□□□□ -1.01
PDLIM5-220ENST00000514830 CSNK1G2-AS1Q8NCQ2 148 aa8.75□□□□□ -1.01
PDLIM5-220ENST00000514830 MRAPQ8TCY5 172 aa8.75□□□□□ -1.01
PDLIM5-220ENST00000514830 DERL1Q9BUN8 251 aa8.75□□□□□ -1.01
PDLIM5-220ENST00000514830 PARLQ9H300 379 aa8.75□□□□□ -1.01
PDLIM5-220ENST00000514830 TREM1Q9NP99 234 aa8.75□□□□□ -1.01
PDLIM5-220ENST00000514830 LY96Q9Y6Y9 160 aa8.75□□□□□ -1.01
PDLIM5-220ENST00000514830 TRBV20OR9-2A0A075B6H5 130 aa8.74□□□□□ -1.01
PDLIM5-220ENST00000514830 M0R2Z0 102 aa8.74□□□□□ -1.01
PDLIM5-220ENST00000514830 PRB4P10163 310 aaPredicted RBP8.74□□□□□ -1.01
PDLIM5-220ENST00000514830 SPINK13Q1W4C9 94 aa8.74□□□□□ -1.01
PDLIM5-220ENST00000514830 Q6AWC8 147 aa8.74□□□□□ -1.01
PDLIM5-220ENST00000514830 COMMD7Q86VX2 200 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms